RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 RBP4P02753 201 aa12.59□□□□□ -0.39
SPG11-210ENST00000558319 CRYBA1P05813 215 aa12.59□□□□□ -0.39
SPG11-210ENST00000558319 SMIM17P0DL12 118 aa12.59□□□□□ -0.39
SPG11-210ENST00000558319 PPOXP50336 477 aa12.59□□□□□ -0.39
SPG11-210ENST00000558319 CNN1P51911 297 aaKnown RBP12.59□□□□□ -0.39
SPG11-210ENST00000558319 INSL4Q14641 139 aa12.59□□□□□ -0.39
SPG11-210ENST00000558319 OR2Z1Q8NG97 314 aa12.59□□□□□ -0.39
SPG11-210ENST00000558319 UBTD2Q8WUN7 234 aa12.59□□□□□ -0.39
SPG11-210ENST00000558319 CORO2AQ92828 525 aa12.59□□□□□ -0.39
SPG11-210ENST00000558319 ASB16Q96NS5 453 aa12.59□□□□□ -0.39
SPG11-210ENST00000558319 TCTAP57738 103 aa12.59□□□□□ -0.39
SPG11-210ENST00000558319 ERHP84090 104 aaKnown RBP12.59□□□□□ -0.39
SPG11-210ENST00000558319 INPP5JQ15735 1006 aaPredicted RBP12.59□□□□□ -0.39
SPG11-210ENST00000558319 TUSC1Q2TAM9 212 aa12.59□□□□□ -0.39
SPG11-210ENST00000558319 DHRS13Q6UX07 377 aa12.59□□□□□ -0.39
SPG11-210ENST00000558319 NHLRC1Q6VVB1 395 aa12.59□□□□□ -0.39
SPG11-210ENST00000558319 BCL7CQ8WUZ0 217 aaPredicted RBP12.59□□□□□ -0.39
SPG11-210ENST00000558319 CSF3RQ99062 836 aa12.59□□□□□ -0.39
SPG11-210ENST00000558319 S1PR3Q99500 378 aa12.59□□□□□ -0.39
SPG11-210ENST00000558319 GSX1Q9H4S2 264 aaPredicted RBP12.59□□□□□ -0.39
SPG11-210ENST00000558319 HS3ST2Q9Y278 367 aa12.59□□□□□ -0.39
SPG11-210ENST00000558319 ASB1Q9Y576 335 aa12.59□□□□□ -0.39
SPG11-210ENST00000558319 SIGLEC1Q9BZZ2 1709 aa12.59□□□□□ -0.39
SPG11-210ENST00000558319 TUBAL3A6NHL2 446 aa12.59□□□□□ -0.39
SPG11-210ENST00000558319 M0R143 59 aa12.59□□□□□ -0.39
SPG11-210ENST00000558319 FCN1O00602 326 aa12.59□□□□□ -0.39
SPG11-210ENST00000558319 MYPOPQ86VE0 399 aaPredicted RBP12.59□□□□□ -0.39
SPG11-210ENST00000558319 TCTEX1D1Q8N7M0 179 aa12.59□□□□□ -0.39
SPG11-210ENST00000558319 ALKBH3Q96Q83 286 aaPredicted RBP12.59□□□□□ -0.39
SPG11-210ENST00000558319 TCRBV16S1A1N1A0A5B0 115 aa12.59□□□□□ -0.39
SPG11-210ENST00000558319 C5orf52A6NGY3 159 aa12.59□□□□□ -0.39
SPG11-210ENST00000558319 FAM157AC9JC47 383 aa12.59□□□□□ -0.39
SPG11-210ENST00000558319 ZNHIT1O43257 154 aa12.59□□□□□ -0.39
SPG11-210ENST00000558319 CD200P41217 278 aa12.59□□□□□ -0.39
SPG11-210ENST00000558319 TFF2Q03403 129 aa12.59□□□□□ -0.39
SPG11-210ENST00000558319 C5orf46Q6UWT4 87 aa12.59□□□□□ -0.39
SPG11-210ENST00000558319 SPNS3Q6ZMD2 512 aa12.59□□□□□ -0.39
SPG11-210ENST00000558319 WDR88Q6ZMY6 472 aa12.59□□□□□ -0.39
SPG11-210ENST00000558319 C16orf47Q6ZP98 133 aaPredicted RBP12.59□□□□□ -0.39
SPG11-210ENST00000558319 TSEN54Q7Z6J9 526 aaKnown RBP12.59□□□□□ -0.39
SPG11-210ENST00000558319 NPEPL1Q8NDH3 523 aa12.59□□□□□ -0.39
SPG11-210ENST00000558319 GALR2O43603 387 aaPredicted RBP12.58□□□□□ -0.4
SPG11-210ENST00000558319 NEURL1O76050 574 aa12.58□□□□□ -0.4
SPG11-210ENST00000558319 NRASP01111 189 aa12.58□□□□□ -0.4
SPG11-210ENST00000558319 BPIFB3P59826 476 aa12.58□□□□□ -0.4
SPG11-210ENST00000558319 FAM3AP98173 230 aa12.58□□□□□ -0.4
SPG11-210ENST00000558319 EXT1Q16394 746 aa12.58□□□□□ -0.4
SPG11-210ENST00000558319 RTL8BQ17RB0 113 aa12.58□□□□□ -0.4
SPG11-210ENST00000558319 UQCC3Q6UW78 93 aa12.58□□□□□ -0.4
SPG11-210ENST00000558319 LHFPL2Q6ZUX7 228 aa12.58□□□□□ -0.4
SPG11-210ENST00000558319 ARHGEF39Q8N4T4 335 aa12.58□□□□□ -0.4
SPG11-210ENST00000558319 HGDQ93099 445 aa12.58□□□□□ -0.4
SPG11-210ENST00000558319 DUS3LQ96G46 650 aaKnown RBP12.58□□□□□ -0.4
SPG11-210ENST00000558319 ADGRG7Q96K78 797 aa12.58□□□□□ -0.4
SPG11-210ENST00000558319 LPAR5Q9H1C0 372 aa12.58□□□□□ -0.4
SPG11-210ENST00000558319 CMC2Q9NRP2 79 aa12.58□□□□□ -0.4
SPG11-210ENST00000558319 P4HTMQ9NXG6 502 aa12.58□□□□□ -0.4
SPG11-210ENST00000558319 MBTPS2O43462 519 aa12.58□□□□□ -0.4
SPG11-210ENST00000558319 ACAA1P09110 424 aaPredicted RBP12.58□□□□□ -0.4
SPG11-210ENST00000558319 PJVKQ0ZLH3 352 aa12.58□□□□□ -0.4
SPG11-210ENST00000558319 FFAR4Q5NUL3 377 aa12.58□□□□□ -0.4
SPG11-210ENST00000558319 EXD3Q8N9H8 876 aa12.58□□□□□ -0.4
SPG11-210ENST00000558319 SMIM19Q96E16 107 aa12.58□□□□□ -0.4
SPG11-210ENST00000558319 WNT1P04628 370 aa12.58□□□□□ -0.4
SPG11-210ENST00000558319 CEBPDP49716 269 aaPredicted RBP12.58□□□□□ -0.4
SPG11-210ENST00000558319 PAX5Q02548 391 aa12.58□□□□□ -0.4
SPG11-210ENST00000558319 PYCR3Q53H96 274 aa12.58□□□□□ -0.4
SPG11-210ENST00000558319 MISP3Q96FF7 219 aa12.58□□□□□ -0.4
SPG11-210ENST00000558319 IGHV3-43A0A0B4J1X8 118 aa12.58□□□□□ -0.4
SPG11-210ENST00000558319 IGHV3-43DP0DP04 118 aa12.58□□□□□ -0.4
SPG11-210ENST00000558319 DAOP14920 347 aa12.58□□□□□ -0.4
SPG11-210ENST00000558319 AGERQ15109 404 aa12.58□□□□□ -0.4
SPG11-210ENST00000558319 GLDNQ6ZMI3 551 aaPredicted RBP12.58□□□□□ -0.4
SPG11-210ENST00000558319 PRR7Q8TB68 274 aa12.58□□□□□ -0.4
SPG11-210ENST00000558319 FAM210BQ96KR6 192 aa12.58□□□□□ -0.4
SPG11-210ENST00000558319 TRAF4Q9BUZ4 470 aaPredicted RBP12.58□□□□□ -0.4
SPG11-210ENST00000558319 PRDM7Q9NQW5 492 aa12.58□□□□□ -0.4
SPG11-210ENST00000558319 SLCO1C1Q9NYB5 712 aa12.58□□□□□ -0.4
SPG11-210ENST00000558319 EIF1BO60739 113 aaKnown RBP12.58□□□□□ -0.4
SPG11-210ENST00000558319 C3AR1Q16581 482 aa12.58□□□□□ -0.4
SPG11-210ENST00000558319 FAM78BQ5VT40 261 aa12.58□□□□□ -0.4
SPG11-210ENST00000558319 GRINAQ7Z429 371 aa12.58□□□□□ -0.4
SPG11-210ENST00000558319 MS4A6EQ96DS6 147 aa12.58□□□□□ -0.4
SPG11-210ENST00000558319 PBOV1Q9GZY1 135 aa12.58□□□□□ -0.4
SPG11-210ENST00000558319 GABARAPL1Q9H0R8 117 aa12.58□□□□□ -0.4
SPG11-210ENST00000558319 CTXN2P0C2S0 81 aa12.57□□□□□ -0.4
SPG11-210ENST00000558319 EPXP11678 715 aa12.57□□□□□ -0.4
SPG11-210ENST00000558319 TMEM240Q5SV17 173 aa12.57□□□□□ -0.4
SPG11-210ENST00000558319 SEZ6L2Q6UXD5 910 aa12.57□□□□□ -0.4
SPG11-210ENST00000558319 ZNF785A8K8V0 405 aa12.57□□□□□ -0.4
SPG11-210ENST00000558319 TCTN3Q6NUS6 607 aa12.57□□□□□ -0.4
SPG11-210ENST00000558319 MRGPRX1Q96LB2 322 aa12.57□□□□□ -0.4
SPG11-210ENST00000558319 LRP6O75581 1613 aa12.57□□□□□ -0.4
SPG11-210ENST00000558319 RAB29O14966 203 aa12.57□□□□□ -0.4
SPG11-210ENST00000558319 SLC37A1P57057 533 aa12.57□□□□□ -0.4
SPG11-210ENST00000558319 TAAR9Q96RI9 348 aa12.57□□□□□ -0.4
SPG11-210ENST00000558319 FBLL1A6NHQ2 334 aaKnown RBP12.57□□□□□ -0.4
SPG11-210ENST00000558319 SDF2Q99470 211 aa12.57□□□□□ -0.4
SPG11-210ENST00000558319 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.57□□□□□ -0.4
SPG11-210ENST00000558319 FCMRO60667 390 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms