RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 GMFBP60983 142 aa18.64■□□□□ 0.57
ACTN1-220ENST00000556433 PRDX4Q13162 271 aa18.64■□□□□ 0.57
ACTN1-220ENST00000556433 TREML4Q6UXN2 200 aa18.64■□□□□ 0.57
ACTN1-220ENST00000556433 CPOQ8IVL8 374 aa18.64■□□□□ 0.57
ACTN1-220ENST00000556433 OR5T2Q8NGG2 359 aa18.64■□□□□ 0.57
ACTN1-220ENST00000556433 C12orf43Q96C57 262 aaKnown RBP18.64■□□□□ 0.57
ACTN1-220ENST00000556433 C1orf21Q9H246 121 aa18.64■□□□□ 0.57
ACTN1-220ENST00000556433 ZNF556Q9HAH1 456 aa18.64■□□□□ 0.57
ACTN1-220ENST00000556433 A0A0U1RQK1 487 aa18.63■□□□□ 0.57
ACTN1-220ENST00000556433 AQP12BA6NM10 295 aa18.63■□□□□ 0.57
ACTN1-220ENST00000556433 E2F6O75461 281 aa18.63■□□□□ 0.57
ACTN1-220ENST00000556433 OSMP13725 252 aa18.63■□□□□ 0.57
ACTN1-220ENST00000556433 ACKR3P25106 362 aa18.63■□□□□ 0.57
ACTN1-220ENST00000556433 RELBQ01201 579 aa18.63■□□□□ 0.57
ACTN1-220ENST00000556433 IKZF1Q13422 519 aa18.63■□□□□ 0.57
ACTN1-220ENST00000556433 KCTD8Q6ZWB6 473 aa18.63■□□□□ 0.57
ACTN1-220ENST00000556433 VMO1Q7Z5L0 202 aa18.63■□□□□ 0.57
ACTN1-220ENST00000556433 AQP12AQ8IXF9 295 aa18.63■□□□□ 0.57
ACTN1-220ENST00000556433 LY6G5BQ8NDX9 201 aa18.63■□□□□ 0.57
ACTN1-220ENST00000556433 OR5P3Q8WZ94 311 aa18.63■□□□□ 0.57
ACTN1-220ENST00000556433 PIGCQ92535 297 aa18.63■□□□□ 0.57
ACTN1-220ENST00000556433 RPL3LQ92901 407 aaKnown RBP18.63■□□□□ 0.57
ACTN1-220ENST00000556433 HAO2Q9NYQ3 351 aa18.63■□□□□ 0.57
ACTN1-220ENST00000556433 ONECUT1Q9UBC0 465 aa18.63■□□□□ 0.57
ACTN1-220ENST00000556433 DNAJB11Q9UBS4 358 aa18.63■□□□□ 0.57
ACTN1-220ENST00000556433 KCNAB3O43448 404 aa18.62■□□□□ 0.57
ACTN1-220ENST00000556433 NDUFA7O95182 113 aa18.62■□□□□ 0.57
ACTN1-220ENST00000556433 CST4P01036 141 aa18.62■□□□□ 0.57
ACTN1-220ENST00000556433 AMY2BP19961 511 aa18.62■□□□□ 0.57
ACTN1-220ENST00000556433 PRKACGP22612 351 aa18.62■□□□□ 0.57
ACTN1-220ENST00000556433 TGM4P49221 684 aa18.62■□□□□ 0.57
ACTN1-220ENST00000556433 RPS7P62081 194 aaKnown RBP18.62■□□□□ 0.57
ACTN1-220ENST00000556433 CDK5Q00535 292 aa18.62■□□□□ 0.57
ACTN1-220ENST00000556433 SRSF4Q08170 494 aaKnown RBP18.62■□□□□ 0.57
ACTN1-220ENST00000556433 ATPAF1Q5TC12 328 aaPredicted RBP18.62■□□□□ 0.57
ACTN1-220ENST00000556433 OLFML2AQ68BL7 652 aa18.62■□□□□ 0.57
ACTN1-220ENST00000556433 C17orf107Q6ZR85 190 aa18.62■□□□□ 0.57
ACTN1-220ENST00000556433 HS3ST5Q8IZT8 346 aa18.62■□□□□ 0.57
ACTN1-220ENST00000556433 OR10Z1Q8NGY1 313 aa18.62■□□□□ 0.57
ACTN1-220ENST00000556433 RNF170Q96K19 258 aa18.62■□□□□ 0.57
ACTN1-220ENST00000556433 LYZL4Q96KX0 146 aa18.62■□□□□ 0.57
ACTN1-220ENST00000556433 PKP2Q99959 881 aa18.62■□□□□ 0.57
ACTN1-220ENST00000556433 ABCB9Q9NP78 766 aa18.62■□□□□ 0.57
ACTN1-220ENST00000556433 SNTG1Q9NSN8 517 aa18.62■□□□□ 0.57
ACTN1-220ENST00000556433 KLHDC2Q9Y2U9 406 aa18.62■□□□□ 0.57
ACTN1-220ENST00000556433 PKD1L1Q8TDX9 2849 aa18.61■□□□□ 0.57
ACTN1-220ENST00000556433 A0A1B0GVI7 797 aa18.61■□□□□ 0.57
ACTN1-220ENST00000556433 TMEM210A6NLX4 147 aa18.61■□□□□ 0.57
ACTN1-220ENST00000556433 GPR37O15354 613 aa18.61■□□□□ 0.57
ACTN1-220ENST00000556433 PRODHO43272 600 aa18.61■□□□□ 0.57
ACTN1-220ENST00000556433 LRRC10Q5BKY1 277 aa18.61■□□□□ 0.57
ACTN1-220ENST00000556433 STUMQ69YW2 141 aa18.61■□□□□ 0.57
ACTN1-220ENST00000556433 PIP4P2Q8N4L2 257 aa18.61■□□□□ 0.57
ACTN1-220ENST00000556433 BBS1Q8NFJ9 593 aa18.61■□□□□ 0.57
ACTN1-220ENST00000556433 OR8B12Q8NGG6 310 aa18.61■□□□□ 0.57
ACTN1-220ENST00000556433 DYRK2Q92630 601 aa18.61■□□□□ 0.57
ACTN1-220ENST00000556433 HIST1H2AAQ96QV6 131 aa18.61■□□□□ 0.57
ACTN1-220ENST00000556433 WDR13Q9H1Z4 485 aa18.61■□□□□ 0.57
ACTN1-220ENST00000556433 NIPAL2Q9H841 368 aa18.61■□□□□ 0.57
ACTN1-220ENST00000556433 CLPSL1A2RUU4 121 aa18.6■□□□□ 0.57
ACTN1-220ENST00000556433 IGHV4-59P01825 116 aa18.6■□□□□ 0.57
ACTN1-220ENST00000556433 HOXB6P17509 224 aaKnown RBP18.6■□□□□ 0.57
ACTN1-220ENST00000556433 ALOX5APP20292 161 aa18.6■□□□□ 0.57
ACTN1-220ENST00000556433 IER3P46695 156 aa18.6■□□□□ 0.57
ACTN1-220ENST00000556433 HCCSP53701 268 aa18.6■□□□□ 0.57
ACTN1-220ENST00000556433 PSMA6P60900 246 aaKnown RBP18.6■□□□□ 0.57
ACTN1-220ENST00000556433 SLC35D3Q5M8T2 416 aa18.6■□□□□ 0.57
ACTN1-220ENST00000556433 TMEM236Q5W0B7 351 aa18.6■□□□□ 0.57
ACTN1-220ENST00000556433 KRT77Q7Z794 578 aa18.6■□□□□ 0.57
ACTN1-220ENST00000556433 CMTM4Q8IZR5 234 aa18.6■□□□□ 0.57
ACTN1-220ENST00000556433 WFDC12Q8WWY7 111 aa18.6■□□□□ 0.57
ACTN1-220ENST00000556433 DMRTB1Q96MA1 342 aa18.6■□□□□ 0.57
ACTN1-220ENST00000556433 RAB3IPQ96QF0 476 aaPredicted RBP18.6■□□□□ 0.57
ACTN1-220ENST00000556433 DCTN5Q9BTE1 182 aa18.6■□□□□ 0.57
ACTN1-220ENST00000556433 TEX12Q9BXU0 123 aa18.6■□□□□ 0.57
ACTN1-220ENST00000556433 ZNF391Q9UJN7 358 aa18.6■□□□□ 0.57
ACTN1-220ENST00000556433 LAMP5Q9UJQ1 280 aa18.6■□□□□ 0.57
ACTN1-220ENST00000556433 FAM96BQ9Y3D0 163 aa18.6■□□□□ 0.57
ACTN1-220ENST00000556433 AKR7A2O43488 359 aa18.59■□□□□ 0.57
ACTN1-220ENST00000556433 GPR137BO60478 399 aa18.59■□□□□ 0.57
ACTN1-220ENST00000556433 ANXA8P13928 327 aa18.59■□□□□ 0.57
ACTN1-220ENST00000556433 SELLP14151 372 aa18.59■□□□□ 0.57
ACTN1-220ENST00000556433 RPL15P61313 204 aaKnown RBP18.59■□□□□ 0.57
ACTN1-220ENST00000556433 FAM76BQ5HYJ3 339 aa18.59■□□□□ 0.57
ACTN1-220ENST00000556433 SPATA24Q86W54 205 aa18.59■□□□□ 0.57
ACTN1-220ENST00000556433 LDLRAD3Q86YD5 345 aa18.59■□□□□ 0.57
ACTN1-220ENST00000556433 ZDHHC23Q8IYP9 409 aa18.59■□□□□ 0.57
ACTN1-220ENST00000556433 H1FXQ92522 213 aaKnown RBP18.59■□□□□ 0.57
ACTN1-220ENST00000556433 FGF23Q9GZV9 251 aaPredicted RBP18.59■□□□□ 0.57
ACTN1-220ENST00000556433 DNTTIP1Q9H147 329 aa18.59■□□□□ 0.57
ACTN1-220ENST00000556433 SIRT7Q9NRC8 400 aa18.59■□□□□ 0.57
ACTN1-220ENST00000556433 LRP12Q9Y561 859 aa18.59■□□□□ 0.57
ACTN1-220ENST00000556433 NKX6-3A6NJ46 265 aa18.58■□□□□ 0.56
ACTN1-220ENST00000556433 PRB3Q04118 309 aaPredicted RBP18.58■□□□□ 0.56
ACTN1-220ENST00000556433 FAM81AQ8TBF8 368 aa18.58■□□□□ 0.56
ACTN1-220ENST00000556433 HPSE2Q8WWQ2 592 aa18.58■□□□□ 0.56
ACTN1-220ENST00000556433 MED30Q96HR3 178 aa18.58■□□□□ 0.56
ACTN1-220ENST00000556433 DPAGT1Q9H3H5 408 aa18.58■□□□□ 0.56
ACTN1-220ENST00000556433 YY1AP1Q9H869 796 aa18.58■□□□□ 0.56
ACTN1-220ENST00000556433 TFF1P04155 84 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms