RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 GSX2Q9BZM3 304 aa11.92□□□□□ -0.5
VIPAS39-208ENST00000556412 CXXC4Q9H2H0 198 aa11.92□□□□□ -0.5
VIPAS39-208ENST00000556412 ITGB1BP2Q9UKP3 347 aa11.92□□□□□ -0.5
VIPAS39-208ENST00000556412 MAGEA13PA6NCF6 341 aa11.91□□□□□ -0.5
VIPAS39-208ENST00000556412 LYNX1G3V0Z9 82 aa11.91□□□□□ -0.5
VIPAS39-208ENST00000556412 F12P00748 615 aaPredicted RBP11.91□□□□□ -0.5
VIPAS39-208ENST00000556412 CD1AP06126 327 aa11.91□□□□□ -0.5
VIPAS39-208ENST00000556412 ADH4P08319 380 aa11.91□□□□□ -0.5
VIPAS39-208ENST00000556412 LYNX1P0DP58 116 aa11.91□□□□□ -0.5
VIPAS39-208ENST00000556412 DAOP14920 347 aa11.91□□□□□ -0.5
VIPAS39-208ENST00000556412 GPM6AP51674 278 aa11.91□□□□□ -0.5
VIPAS39-208ENST00000556412 RPS11P62280 158 aaKnown RBP eCLIP11.91□□□□□ -0.5
VIPAS39-208ENST00000556412 HNRNPA0Q13151 305 aaKnown RBP11.91□□□□□ -0.5
VIPAS39-208ENST00000556412 MAB21L1Q13394 359 aa11.91□□□□□ -0.5
VIPAS39-208ENST00000556412 INSL4Q14641 139 aa11.91□□□□□ -0.5
VIPAS39-208ENST00000556412 Q499Y3 187 aa11.91□□□□□ -0.5
VIPAS39-208ENST00000556412 PRAMEF6Q5VXH4 476 aa11.91□□□□□ -0.5
VIPAS39-208ENST00000556412 MS4A15Q8N5U1 240 aa11.91□□□□□ -0.5
VIPAS39-208ENST00000556412 SPERTQ8NA61 448 aa11.91□□□□□ -0.5
VIPAS39-208ENST00000556412 UBASH3BQ8TF42 649 aa11.91□□□□□ -0.5
VIPAS39-208ENST00000556412 PP6455Q8WZ26 134 aa11.91□□□□□ -0.5
VIPAS39-208ENST00000556412 OR5P3Q8WZ94 311 aa11.91□□□□□ -0.5
VIPAS39-208ENST00000556412 ITFG2Q969R8 447 aa11.91□□□□□ -0.5
VIPAS39-208ENST00000556412 ORAI1Q96D31 301 aa11.91□□□□□ -0.5
VIPAS39-208ENST00000556412 ITPKCQ96DU7 683 aa11.91□□□□□ -0.5
VIPAS39-208ENST00000556412 CHST5Q9GZS9 411 aa11.91□□□□□ -0.5
VIPAS39-208ENST00000556412 BARX1Q9HBU1 254 aaPredicted RBP11.91□□□□□ -0.5
VIPAS39-208ENST00000556412 UFSP2Q9NUQ7 469 aa11.91□□□□□ -0.5
VIPAS39-208ENST00000556412 C14orf119Q9NWQ9 140 aa11.91□□□□□ -0.5
VIPAS39-208ENST00000556412 IL19Q9UHD0 177 aa11.91□□□□□ -0.5
VIPAS39-208ENST00000556412 FAM230AA0A1W2PPH8 454 aa11.9□□□□□ -0.5
VIPAS39-208ENST00000556412 A6NLC8 198 aa11.9□□□□□ -0.5
VIPAS39-208ENST00000556412 GATBO75879 557 aaKnown RBP11.9□□□□□ -0.5
VIPAS39-208ENST00000556412 CD55P08174 381 aa11.9□□□□□ -0.5
VIPAS39-208ENST00000556412 TNFRSF1AP19438 455 aa11.9□□□□□ -0.5
VIPAS39-208ENST00000556412 MZT1Q08AG7 82 aa11.9□□□□□ -0.5
VIPAS39-208ENST00000556412 GPR50Q13585 617 aa11.9□□□□□ -0.5
VIPAS39-208ENST00000556412 TESK1Q15569 626 aa11.9□□□□□ -0.5
VIPAS39-208ENST00000556412 UBE2V2Q15819 145 aa11.9□□□□□ -0.5
VIPAS39-208ENST00000556412 SSX1Q16384 188 aa11.9□□□□□ -0.5
VIPAS39-208ENST00000556412 CEACAM21Q3KPI0 293 aa11.9□□□□□ -0.5
VIPAS39-208ENST00000556412 SERPINA12Q8IW75 414 aa11.9□□□□□ -0.5
VIPAS39-208ENST00000556412 HPSE2Q8WWQ2 592 aa11.9□□□□□ -0.5
VIPAS39-208ENST00000556412 C10orf35Q96D05 121 aa11.9□□□□□ -0.5
VIPAS39-208ENST00000556412 MBD6Q96DN6 1003 aa11.9□□□□□ -0.5
VIPAS39-208ENST00000556412 ABCB9Q9NP78 766 aa11.9□□□□□ -0.5
VIPAS39-208ENST00000556412 TAS2R4Q9NYW5 299 aa11.9□□□□□ -0.5
VIPAS39-208ENST00000556412 SLC7A11Q9UPY5 501 aa11.9□□□□□ -0.5
VIPAS39-208ENST00000556412 TACC2O95359 2948 aa11.9□□□□□ -0.5
VIPAS39-208ENST00000556412 ABCA12Q86UK0 2595 aa11.9□□□□□ -0.5
VIPAS39-208ENST00000556412 RTTNQ86VV8 2226 aa11.9□□□□□ -0.5
VIPAS39-208ENST00000556412 IGHV1-69-2A0A0G2JMI3 117 aa11.9□□□□□ -0.5
VIPAS39-208ENST00000556412 TRBV5-5A0A0J9YX44 114 aa11.9□□□□□ -0.5
VIPAS39-208ENST00000556412 LOC100289279A0A1B0GTE1 492 aa11.9□□□□□ -0.5
VIPAS39-208ENST00000556412 A0A1B0GWJ7 208 aa11.9□□□□□ -0.5
VIPAS39-208ENST00000556412 ZNF879B4DU55 563 aa11.9□□□□□ -0.5
VIPAS39-208ENST00000556412 ZNF732B4DXR9 585 aa11.9□□□□□ -0.5
VIPAS39-208ENST00000556412 CCRL2O00421 344 aa11.9□□□□□ -0.5
VIPAS39-208ENST00000556412 SMIM18P0DKX4 95 aa11.9□□□□□ -0.5
VIPAS39-208ENST00000556412 THBS2P35442 1172 aa11.9□□□□□ -0.5
VIPAS39-208ENST00000556412 RBMXP38159 391 aaKnown RBP11.9□□□□□ -0.5
VIPAS39-208ENST00000556412 GP2P55259 537 aaKnown RBP11.9□□□□□ -0.5
VIPAS39-208ENST00000556412 ACSM3Q53FZ2 586 aa11.9□□□□□ -0.5
VIPAS39-208ENST00000556412 TMEM42Q69YG0 159 aa11.9□□□□□ -0.5
VIPAS39-208ENST00000556412 MOGAT3Q86VF5 341 aa11.9□□□□□ -0.5
VIPAS39-208ENST00000556412 ZNF525Q8N782 197 aa11.9□□□□□ -0.5
VIPAS39-208ENST00000556412 OR5D14Q8NGL3 314 aa11.9□□□□□ -0.5
VIPAS39-208ENST00000556412 CCL17Q92583 94 aa11.9□□□□□ -0.5
VIPAS39-208ENST00000556412 MUL1Q969V5 352 aa11.9□□□□□ -0.5
VIPAS39-208ENST00000556412 PPP1R3CQ9UQK1 317 aa11.9□□□□□ -0.5
VIPAS39-208ENST00000556412 CACNG2Q9Y698 323 aa11.9□□□□□ -0.5
VIPAS39-208ENST00000556412 HEATR1Q9H583 2144 aaKnown RBP11.9□□□□□ -0.51
VIPAS39-208ENST00000556412 FLNBO75369 2602 aaKnown RBP11.89□□□□□ -0.51
VIPAS39-208ENST00000556412 RAI1Q7Z5J4 1906 aaPredicted RBP11.89□□□□□ -0.51
VIPAS39-208ENST00000556412 GABRA5P31644 462 aa11.89□□□□□ -0.51
VIPAS39-208ENST00000556412 CD200P41217 278 aa11.89□□□□□ -0.51
VIPAS39-208ENST00000556412 CNN3Q15417 329 aaKnown RBP11.89□□□□□ -0.51
VIPAS39-208ENST00000556412 MPPED2Q15777 294 aa11.89□□□□□ -0.51
VIPAS39-208ENST00000556412 CEACAM19Q7Z692 300 aa11.89□□□□□ -0.51
VIPAS39-208ENST00000556412 TGIF2LYQ8IUE0 185 aa11.89□□□□□ -0.51
VIPAS39-208ENST00000556412 PARP16Q8N5Y8 322 aa11.89□□□□□ -0.51
VIPAS39-208ENST00000556412 ZNF420Q8TAQ5 688 aaPredicted RBP11.89□□□□□ -0.51
VIPAS39-208ENST00000556412 RDH5Q92781 318 aa11.89□□□□□ -0.51
VIPAS39-208ENST00000556412 MRPS26Q9BYN8 205 aaKnown RBP11.89□□□□□ -0.51
VIPAS39-208ENST00000556412 FGF23Q9GZV9 251 aaPredicted RBP11.89□□□□□ -0.51
VIPAS39-208ENST00000556412 ZCCHC4Q9H5U6 513 aa11.89□□□□□ -0.51
VIPAS39-208ENST00000556412 NOX4Q9NPH5 578 aa11.89□□□□□ -0.51
VIPAS39-208ENST00000556412 NDUFB11Q9NX14 153 aa11.89□□□□□ -0.51
VIPAS39-208ENST00000556412 CKLFQ9UBR5 152 aa11.89□□□□□ -0.51
VIPAS39-208ENST00000556412 APCP25054 2843 aa11.88□□□□□ -0.51
VIPAS39-208ENST00000556412 hCG_1807616A0A1W2PRN6 198 aa11.88□□□□□ -0.51
VIPAS39-208ENST00000556412 RGS9O75916 674 aaPredicted RBP11.88□□□□□ -0.51
VIPAS39-208ENST00000556412 HCKP08631 526 aa11.88□□□□□ -0.51
VIPAS39-208ENST00000556412 PAX1P15863 534 aa11.88□□□□□ -0.51
VIPAS39-208ENST00000556412 ATF1P18846 271 aa11.88□□□□□ -0.51
VIPAS39-208ENST00000556412 COL8A2P25067 703 aa11.88□□□□□ -0.51
VIPAS39-208ENST00000556412 MAPK3P27361 379 aaPredicted RBP11.88□□□□□ -0.51
VIPAS39-208ENST00000556412 ART1P52961 327 aa11.88□□□□□ -0.51
VIPAS39-208ENST00000556412 PPP3R1P63098 170 aa11.88□□□□□ -0.51
VIPAS39-208ENST00000556412 GNG3P63215 75 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms