RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 H3BSH0 61 aa6.49□□□□□ -1.37
TDP1-214ENST00000556063 MAGEB3O15480 346 aa6.49□□□□□ -1.37
TDP1-214ENST00000556063 LILRA1O75019 489 aa6.49□□□□□ -1.37
TDP1-214ENST00000556063 HLA-DPB1P04440 258 aa6.49□□□□□ -1.37
TDP1-214ENST00000556063 IRF2P14316 349 aa6.49□□□□□ -1.37
TDP1-214ENST00000556063 DAOP14920 347 aa6.49□□□□□ -1.37
TDP1-214ENST00000556063 CPEP16870 476 aa6.49□□□□□ -1.37
TDP1-214ENST00000556063 PRKACBP22694 351 aa6.49□□□□□ -1.37
TDP1-214ENST00000556063 ANOS1P23352 680 aa6.49□□□□□ -1.37
TDP1-214ENST00000556063 PSMB9P28065 219 aa6.49□□□□□ -1.37
TDP1-214ENST00000556063 CD200P41217 278 aa6.49□□□□□ -1.37
TDP1-214ENST00000556063 MAGEB1P43366 347 aa6.49□□□□□ -1.37
TDP1-214ENST00000556063 PDLIM4P50479 330 aa6.49□□□□□ -1.37
TDP1-214ENST00000556063 PPP3R1P63098 170 aa6.49□□□□□ -1.37
TDP1-214ENST00000556063 GNG3P63215 75 aa6.49□□□□□ -1.37
TDP1-214ENST00000556063 CCL8P80075 99 aa6.49□□□□□ -1.37
TDP1-214ENST00000556063 TNK1Q13470 666 aa6.49□□□□□ -1.37
TDP1-214ENST00000556063 CNN3Q15417 329 aaKnown RBP6.49□□□□□ -1.37
TDP1-214ENST00000556063 HFEQ30201 348 aa6.49□□□□□ -1.37
TDP1-214ENST00000556063 CEACAM21Q3KPI0 293 aa6.49□□□□□ -1.37
TDP1-214ENST00000556063 Q499Y3 187 aa6.49□□□□□ -1.37
TDP1-214ENST00000556063 ARMCX4Q5H9R4 360 aa6.49□□□□□ -1.37
TDP1-214ENST00000556063 TMEM255AQ5JRV8 349 aa6.49□□□□□ -1.37
TDP1-214ENST00000556063 UBE2UQ5VVX9 321 aa6.49□□□□□ -1.37
TDP1-214ENST00000556063 LIPKQ5VXJ0 399 aa6.49□□□□□ -1.37
TDP1-214ENST00000556063 SHEQ5VZ18 495 aa6.49□□□□□ -1.37
TDP1-214ENST00000556063 PLCXD3Q63HM9 321 aa6.49□□□□□ -1.37
TDP1-214ENST00000556063 TMEM42Q69YG0 159 aa6.49□□□□□ -1.37
TDP1-214ENST00000556063 CLEC2AQ6UVW9 174 aa6.49□□□□□ -1.37
TDP1-214ENST00000556063 Q6ZR03 302 aa6.49□□□□□ -1.37
TDP1-214ENST00000556063 KCTD8Q6ZWB6 473 aa6.49□□□□□ -1.37
TDP1-214ENST00000556063 UTS2BQ765I0 119 aa6.49□□□□□ -1.37
TDP1-214ENST00000556063 PEG10Q86TG7 708 aaKnown RBP6.49□□□□□ -1.37
TDP1-214ENST00000556063 SERPINA12Q8IW75 414 aa6.49□□□□□ -1.37
TDP1-214ENST00000556063 ZCCHC24Q8N2G6 241 aaKnown RBP6.49□□□□□ -1.37
TDP1-214ENST00000556063 OR10AD1Q8NGE0 317 aa6.49□□□□□ -1.37
TDP1-214ENST00000556063 OR5A2Q8NGI9 324 aa6.49□□□□□ -1.37
TDP1-214ENST00000556063 OR11L1Q8NGX0 322 aa6.49□□□□□ -1.37
TDP1-214ENST00000556063 PHYHIPQ92561 330 aa6.49□□□□□ -1.37
TDP1-214ENST00000556063 HPS1Q92902 700 aa6.49□□□□□ -1.37
TDP1-214ENST00000556063 FGGYQ96C11 551 aa6.49□□□□□ -1.37
TDP1-214ENST00000556063 CPNE2Q96FN4 548 aaPredicted RBP6.49□□□□□ -1.37
TDP1-214ENST00000556063 RNF170Q96K19 258 aa6.49□□□□□ -1.37
TDP1-214ENST00000556063 MEGF10Q96KG7 1140 aa6.49□□□□□ -1.37
TDP1-214ENST00000556063 OR2V2Q96R30 315 aa6.49□□□□□ -1.37
TDP1-214ENST00000556063 FOXC2Q99958 501 aa6.49□□□□□ -1.37
TDP1-214ENST00000556063 SOX7Q9BT81 388 aa6.49□□□□□ -1.37
TDP1-214ENST00000556063 CHST5Q9GZS9 411 aa6.49□□□□□ -1.37
TDP1-214ENST00000556063 ZCCHC4Q9H5U6 513 aa6.49□□□□□ -1.37
TDP1-214ENST00000556063 FN3KRPQ9HA64 309 aa6.49□□□□□ -1.37
TDP1-214ENST00000556063 SIRT4Q9Y6E7 314 aaPredicted RBP6.49□□□□□ -1.37
TDP1-214ENST00000556063 PRRC2AP48634 2157 aaKnown RBP6.49□□□□□ -1.37
TDP1-214ENST00000556063 DYSFO75923 2080 aa6.49□□□□□ -1.37
TDP1-214ENST00000556063 UTP20O75691 2785 aaKnown RBP6.49□□□□□ -1.37
TDP1-214ENST00000556063 MYO9AB2RTY4 2548 aa6.48□□□□□ -1.37
TDP1-214ENST00000556063 IGHV1-69-2A0A0G2JMI3 117 aa6.48□□□□□ -1.37
TDP1-214ENST00000556063 TRBV5-5A0A0J9YX44 114 aa6.48□□□□□ -1.37
TDP1-214ENST00000556063 A6NLC8 198 aa6.48□□□□□ -1.37
TDP1-214ENST00000556063 ZNF879B4DU55 563 aa6.48□□□□□ -1.37
TDP1-214ENST00000556063 F5H5P2 479 aa6.48□□□□□ -1.37
TDP1-214ENST00000556063 NDUFS8O00217 210 aa6.48□□□□□ -1.37
TDP1-214ENST00000556063 CCRL2O00421 344 aa6.48□□□□□ -1.37
TDP1-214ENST00000556063 MLNRO43193 412 aa6.48□□□□□ -1.37
TDP1-214ENST00000556063 SSX4O60224 188 aa6.48□□□□□ -1.37
TDP1-214ENST00000556063 ALX3O95076 343 aa6.48□□□□□ -1.37
TDP1-214ENST00000556063 IGHV4-39P01824 125 aa6.48□□□□□ -1.37
TDP1-214ENST00000556063 HPXP02790 462 aa6.48□□□□□ -1.37
TDP1-214ENST00000556063 ATF1P18846 271 aa6.48□□□□□ -1.37
TDP1-214ENST00000556063 RAB3AP20336 220 aa6.48□□□□□ -1.37
TDP1-214ENST00000556063 PCMT1P22061 227 aa6.48□□□□□ -1.37
TDP1-214ENST00000556063 GABRA5P31644 462 aa6.48□□□□□ -1.37
TDP1-214ENST00000556063 CRYBB2P43320 205 aa6.48□□□□□ -1.37
TDP1-214ENST00000556063 GATA4P43694 442 aa6.48□□□□□ -1.37
TDP1-214ENST00000556063 SOX2P48431 317 aa6.48□□□□□ -1.37
TDP1-214ENST00000556063 FUT6P51993 359 aa6.48□□□□□ -1.37
TDP1-214ENST00000556063 ART1P52961 327 aa6.48□□□□□ -1.37
TDP1-214ENST00000556063 NEDD8Q15843 81 aa6.48□□□□□ -1.37
TDP1-214ENST00000556063 CARTPTQ16568 116 aa6.48□□□□□ -1.37
TDP1-214ENST00000556063 PRSS57Q6UWY2 283 aa6.48□□□□□ -1.37
TDP1-214ENST00000556063 ZNF573Q86YE8 665 aa6.48□□□□□ -1.37
TDP1-214ENST00000556063 PHC2Q8IXK0 858 aa6.48□□□□□ -1.37
TDP1-214ENST00000556063 C1orf87Q8N0U7 546 aa6.48□□□□□ -1.37
TDP1-214ENST00000556063 PARP16Q8N5Y8 322 aa6.48□□□□□ -1.37
TDP1-214ENST00000556063 DNAAF1Q8NEP3 725 aa6.48□□□□□ -1.37
TDP1-214ENST00000556063 OR51A4Q8NGJ6 313 aa6.48□□□□□ -1.37
TDP1-214ENST00000556063 OR10AC1Q8NH08 325 aa6.48□□□□□ -1.37
TDP1-214ENST00000556063 ZNF671Q8TAW3 534 aa6.48□□□□□ -1.37
TDP1-214ENST00000556063 ITLN1Q8WWA0 313 aa6.48□□□□□ -1.37
TDP1-214ENST00000556063 OR5P3Q8WZ94 311 aa6.48□□□□□ -1.37
TDP1-214ENST00000556063 GTF3AQ92664 365 aaKnown RBP6.48□□□□□ -1.37
TDP1-214ENST00000556063 TMEM106AQ96A25 262 aa6.48□□□□□ -1.37
TDP1-214ENST00000556063 SPSB1Q96BD6 273 aa6.48□□□□□ -1.37
TDP1-214ENST00000556063 ITPKCQ96DU7 683 aa6.48□□□□□ -1.37
TDP1-214ENST00000556063 ADAT3Q96EY9 351 aaPredicted RBP6.48□□□□□ -1.37
TDP1-214ENST00000556063 BORCS8Q96FH0 119 aa6.48□□□□□ -1.37
TDP1-214ENST00000556063 TIMD4Q96H15 378 aa6.48□□□□□ -1.37
TDP1-214ENST00000556063 PGLYRP3Q96LB9 341 aa6.48□□□□□ -1.37
TDP1-214ENST00000556063 OPALINQ96PE5 141 aa6.48□□□□□ -1.37
TDP1-214ENST00000556063 TMED9Q9BVK6 235 aa6.48□□□□□ -1.37
TDP1-214ENST00000556063 GPR173Q9NS66 373 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms