RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 BARX1Q9HBU1 254 aaPredicted RBP3.4□□□□□ -1.86
LINC00648-202ENST00000555985 ISYNA1Q9NPH2 558 aa3.4□□□□□ -1.86
LINC00648-202ENST00000555985 TAS2R3Q9NYW6 316 aa3.4□□□□□ -1.86
LINC00648-202ENST00000555985 TREM2Q9NZC2 230 aa3.4□□□□□ -1.86
LINC00648-202ENST00000555985 DNAJC27Q9NZQ0 273 aa3.4□□□□□ -1.86
LINC00648-202ENST00000555985 RPS6KB2Q9UBS0 482 aa3.4□□□□□ -1.86
LINC00648-202ENST00000555985 HIF3AQ9Y2N7 669 aa3.4□□□□□ -1.86
LINC00648-202ENST00000555985 MAST4O15021 2626 aa3.4□□□□□ -1.86
LINC00648-202ENST00000555985 SHISA3A0PJX4 238 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 TMEM218A2RU14 115 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 DPRXA6NFQ7 191 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 J3KTA2 159 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 SLC31A2O15432 143 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 PRAF2O60831 178 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 UPK3AO75631 287 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 OR2A4O95047 310 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 AHSA1O95433 338 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 IGKV3-15P01624 115 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 HIST1H2ABP04908 130 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 HEXAP06865 529 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 DANCRP0C864 163 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 PGA4P0DJD7 388 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 PGA3P0DJD8 388 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 FOLR2P14207 255 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 CBR1P16152 277 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 NPR2P20594 1047 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 LAP3P28838 519 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 MPGP29372 298 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 OMPP47874 163 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 OR1E2P47887 323 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 PITPNBP48739 271 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 CCR6P51684 374 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 WNT4P56705 351 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 TAS2R60P59551 318 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 RAB5BP61020 215 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 SPIBQ01892 262 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 ALKBH1Q13686 389 aaKnown RBP3.4□□□□□ -1.87
LINC00648-202ENST00000555985 SMCO1Q147U7 214 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 SEC23BQ15437 767 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 GUCA2BQ16661 112 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 NRN1LQ496H8 165 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 ZNF770Q6IQ21 691 aaPredicted RBP3.4□□□□□ -1.87
LINC00648-202ENST00000555985 UQCC3Q6UW78 93 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 Q6ZTK2 550 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 TMPRSS11FQ6ZWK6 438 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 HIST3H2AQ7L7L0 130 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 SSX9Q7RTT3 188 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 FAM122BQ7Z309 247 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 OAFQ86UD1 273 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 LRRC28Q86X40 367 aaPredicted RBP3.4□□□□□ -1.87
LINC00648-202ENST00000555985 RNF113BQ8IZP6 322 aaKnown RBP3.4□□□□□ -1.87
LINC00648-202ENST00000555985 SPAG16Q8N0X2 631 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 LRRC75A-AS1Q8N1F1 130 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 TOMM5Q8N4H5 51 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 POMGNT2Q8NAT1 580 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 OR52I1Q8NGK6 324 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 OR10K1Q8NGX5 313 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 OR5J2Q8NH18 312 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 OR6X1Q8NH79 312 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 ZNF519Q8TB69 540 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 GEMIN6Q8WXD5 167 aaKnown RBP3.4□□□□□ -1.87
LINC00648-202ENST00000555985 ASB10Q8WXI3 467 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 NRGNQ92686 78 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 HIST1H2ACQ93077 130 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 GTPBP3Q969Y2 492 aaKnown RBP3.4□□□□□ -1.87
LINC00648-202ENST00000555985 ZNF837Q96EG3 531 aaPredicted RBP3.4□□□□□ -1.87
LINC00648-202ENST00000555985 ADAD1Q96M93 576 aaKnown RBP3.4□□□□□ -1.87
LINC00648-202ENST00000555985 HS6ST2Q96MM7 605 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 OR2A7Q96R45 310 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 GPX7Q96SL4 187 aaPredicted RBP3.4□□□□□ -1.87
LINC00648-202ENST00000555985 TSSK6Q9BXA6 273 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 PRRG4Q9BZD6 226 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 ZNF701Q9NV72 531 aaPredicted RBP3.4□□□□□ -1.87
LINC00648-202ENST00000555985 PARPBPQ9NWS1 579 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 KLHL28Q9NXS3 571 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 MGAT4CQ9UBM8 478 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 ENPP4Q9Y6X5 453 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 PCNX1Q96RV3 2341 aa3.4□□□□□ -1.87
LINC00648-202ENST00000555985 ZFHX3Q15911 3703 aa3.39□□□□□ -1.87
LINC00648-202ENST00000555985 A0A087WUU8 490 aa3.39□□□□□ -1.87
LINC00648-202ENST00000555985 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.39□□□□□ -1.87
LINC00648-202ENST00000555985 CUBNO60494 3623 aa3.39□□□□□ -1.87
LINC00648-202ENST00000555985 LY86O95711 162 aa3.39□□□□□ -1.87
LINC00648-202ENST00000555985 RAB36O95755 333 aa3.39□□□□□ -1.87
LINC00648-202ENST00000555985 PLGP00747 810 aaPredicted RBP3.39□□□□□ -1.87
LINC00648-202ENST00000555985 PLAUP00749 431 aa3.39□□□□□ -1.87
LINC00648-202ENST00000555985 CD8AP01732 235 aa3.39□□□□□ -1.87
LINC00648-202ENST00000555985 NDUFB7P17568 137 aa3.39□□□□□ -1.87
LINC00648-202ENST00000555985 MAKP20794 623 aa3.39□□□□□ -1.87
LINC00648-202ENST00000555985 HOXC12P31275 282 aa3.39□□□□□ -1.87
LINC00648-202ENST00000555985 PRRC2AP48634 2157 aaKnown RBP3.39□□□□□ -1.87
LINC00648-202ENST00000555985 PGGHGQ32M88 737 aa3.39□□□□□ -1.87
LINC00648-202ENST00000555985 IFI44LQ53G44 452 aa3.39□□□□□ -1.87
LINC00648-202ENST00000555985 BEX5Q5H9J7 111 aa3.39□□□□□ -1.87
LINC00648-202ENST00000555985 C10orf128Q5T292 105 aa3.39□□□□□ -1.87
LINC00648-202ENST00000555985 LCE2AQ5TA79 106 aaPredicted RBP3.39□□□□□ -1.87
LINC00648-202ENST00000555985 LRRN1Q6UXK5 716 aa3.39□□□□□ -1.87
LINC00648-202ENST00000555985 MBOAT2Q6ZWT7 520 aa3.39□□□□□ -1.87
LINC00648-202ENST00000555985 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.39□□□□□ -1.87
LINC00648-202ENST00000555985 DTX2Q86UW9 622 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms