RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 PPP1R3EQ9H7J1 279 aa16.25■□□□□ 0.19
PRKCH-219ENST00000555906 BRD7Q9NPI1 651 aa16.25■□□□□ 0.19
PRKCH-219ENST00000555906 ONECUT1Q9UBC0 465 aa16.25■□□□□ 0.19
PRKCH-219ENST00000555906 NOTCH1P46531 2555 aa16.25■□□□□ 0.19
PRKCH-219ENST00000555906 CDIPTO14735 213 aa16.24■□□□□ 0.19
PRKCH-219ENST00000555906 PRODHO43272 600 aa16.24■□□□□ 0.19
PRKCH-219ENST00000555906 NDUFB3O43676 98 aa16.24■□□□□ 0.19
PRKCH-219ENST00000555906 IGHV4-59P01825 116 aa16.24■□□□□ 0.19
PRKCH-219ENST00000555906 CALB2P22676 271 aa16.24■□□□□ 0.19
PRKCH-219ENST00000555906 IER3P46695 156 aa16.24■□□□□ 0.19
PRKCH-219ENST00000555906 PSMA6P60900 246 aaKnown RBP16.24■□□□□ 0.19
PRKCH-219ENST00000555906 PRDX4Q13162 271 aa16.24■□□□□ 0.19
PRKCH-219ENST00000555906 PIP4P2Q8N4L2 257 aa16.24■□□□□ 0.19
PRKCH-219ENST00000555906 C8orf46Q8TAG6 207 aa16.24■□□□□ 0.19
PRKCH-219ENST00000555906 LRTOMTQ8WZ04 291 aa16.24■□□□□ 0.19
PRKCH-219ENST00000555906 LRGUKQ96M69 825 aa16.24■□□□□ 0.19
PRKCH-219ENST00000555906 OR51V1Q9H2C8 321 aa16.24■□□□□ 0.19
PRKCH-219ENST00000555906 ZNF391Q9UJN7 358 aa16.24■□□□□ 0.19
PRKCH-219ENST00000555906 PRKDCP78527 4128 aaKnown RBP16.24■□□□□ 0.19
PRKCH-219ENST00000555906 NKX6-3A6NJ46 265 aa16.23■□□□□ 0.19
PRKCH-219ENST00000555906 PRR23D1E9PI22 279 aaPredicted RBP16.23■□□□□ 0.19
PRKCH-219ENST00000555906 SELENOFO60613 162 aa16.23■□□□□ 0.19
PRKCH-219ENST00000555906 CST4P01036 141 aa16.23■□□□□ 0.19
PRKCH-219ENST00000555906 CST1P01037 141 aa16.23■□□□□ 0.19
PRKCH-219ENST00000555906 PRR23D2P0DMB1 279 aaPredicted RBP16.23■□□□□ 0.19
PRKCH-219ENST00000555906 ACKR3P25106 362 aa16.23■□□□□ 0.19
PRKCH-219ENST00000555906 TGM4P49221 684 aa16.23■□□□□ 0.19
PRKCH-219ENST00000555906 SRSF4Q08170 494 aaKnown RBP16.23■□□□□ 0.19
PRKCH-219ENST00000555906 LRRC10Q5BKY1 277 aa16.23■□□□□ 0.19
PRKCH-219ENST00000555906 ATPAF1Q5TC12 328 aaPredicted RBP16.23■□□□□ 0.19
PRKCH-219ENST00000555906 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.23■□□□□ 0.19
PRKCH-219ENST00000555906 PDZD9Q8IXQ8 264 aa16.23■□□□□ 0.19
PRKCH-219ENST00000555906 NPRL2Q8WTW4 380 aa16.23■□□□□ 0.19
PRKCH-219ENST00000555906 OR5P3Q8WZ94 311 aa16.23■□□□□ 0.19
PRKCH-219ENST00000555906 CCDC124Q96CT7 223 aaKnown RBP16.23■□□□□ 0.19
PRKCH-219ENST00000555906 SEH1LQ96EE3 360 aa16.23■□□□□ 0.19
PRKCH-219ENST00000555906 RAB3IPQ96QF0 476 aaPredicted RBP16.23■□□□□ 0.19
PRKCH-219ENST00000555906 PKP2Q99959 881 aa16.23■□□□□ 0.19
PRKCH-219ENST00000555906 DCTN5Q9BTE1 182 aa16.23■□□□□ 0.19
PRKCH-219ENST00000555906 DPAGT1Q9H3H5 408 aa16.23■□□□□ 0.19
PRKCH-219ENST00000555906 HAO2Q9NYQ3 351 aa16.23■□□□□ 0.19
PRKCH-219ENST00000555906 PDP1Q9P0J1 537 aaPredicted RBP16.23■□□□□ 0.19
PRKCH-219ENST00000555906 ZNRD1Q9P1U0 126 aa16.23■□□□□ 0.19
PRKCH-219ENST00000555906 DNAJB11Q9UBS4 358 aa16.23■□□□□ 0.19
PRKCH-219ENST00000555906 CAB39Q9Y376 341 aaPredicted RBP16.23■□□□□ 0.19
PRKCH-219ENST00000555906 FBP1P09467 338 aa16.22■□□□□ 0.19
PRKCH-219ENST00000555906 AMY2BP19961 511 aa16.22■□□□□ 0.19
PRKCH-219ENST00000555906 GUCA2AQ02747 115 aa16.22■□□□□ 0.19
PRKCH-219ENST00000555906 IKZF1Q13422 519 aa16.22■□□□□ 0.19
PRKCH-219ENST00000555906 PDLIM3Q53GG5 364 aaPredicted RBP16.22■□□□□ 0.19
PRKCH-219ENST00000555906 PLBD1Q6P4A8 553 aa16.22■□□□□ 0.19
PRKCH-219ENST00000555906 GDPGP1Q6ZNW5 385 aa16.22■□□□□ 0.19
PRKCH-219ENST00000555906 ADGRG5Q8IZF4 528 aa16.22■□□□□ 0.19
PRKCH-219ENST00000555906 HPSE2Q8WWQ2 592 aa16.22■□□□□ 0.19
PRKCH-219ENST00000555906 CHID1Q9BWS9 393 aa16.22■□□□□ 0.19
PRKCH-219ENST00000555906 NIPAL2Q9H841 368 aa16.22■□□□□ 0.19
PRKCH-219ENST00000555906 SIRT7Q9NRC8 400 aa16.22■□□□□ 0.19
PRKCH-219ENST00000555906 TGP01266 2768 aa16.21■□□□□ 0.19
PRKCH-219ENST00000555906 ZNF850A8MQ14 1090 aa16.21■□□□□ 0.19
PRKCH-219ENST00000555906 M0QZ24 198 aa16.21■□□□□ 0.19
PRKCH-219ENST00000555906 TIMM23O14925 209 aa16.21■□□□□ 0.19
PRKCH-219ENST00000555906 SELLP14151 372 aa16.21■□□□□ 0.19
PRKCH-219ENST00000555906 DEFA6Q01524 100 aa16.21■□□□□ 0.19
PRKCH-219ENST00000555906 GINS1Q14691 196 aa16.21■□□□□ 0.19
PRKCH-219ENST00000555906 FAM76BQ5HYJ3 339 aa16.21■□□□□ 0.19
PRKCH-219ENST00000555906 SLC35D3Q5M8T2 416 aa16.21■□□□□ 0.19
PRKCH-219ENST00000555906 ZDHHC23Q8IYP9 409 aa16.21■□□□□ 0.19
PRKCH-219ENST00000555906 OR8B12Q8NGG6 310 aa16.21■□□□□ 0.19
PRKCH-219ENST00000555906 LINC01006Q8NI28 216 aa16.21■□□□□ 0.19
PRKCH-219ENST00000555906 THEM6Q8WUY1 208 aa16.21■□□□□ 0.19
PRKCH-219ENST00000555906 RPL3LQ92901 407 aaKnown RBP16.21■□□□□ 0.19
PRKCH-219ENST00000555906 LYZL4Q96KX0 146 aa16.21■□□□□ 0.19
PRKCH-219ENST00000555906 FGF23Q9GZV9 251 aaPredicted RBP16.21■□□□□ 0.19
PRKCH-219ENST00000555906 WDR13Q9H1Z4 485 aa16.21■□□□□ 0.19
PRKCH-219ENST00000555906 KLHDC2Q9Y2U9 406 aa16.21■□□□□ 0.19
PRKCH-219ENST00000555906 FAM96BQ9Y3D0 163 aa16.21■□□□□ 0.19
PRKCH-219ENST00000555906 RNF114Q9Y508 228 aa16.21■□□□□ 0.19
PRKCH-219ENST00000555906 CLPXO76031 633 aa16.2■□□□□ 0.18
PRKCH-219ENST00000555906 HOXB6P17509 224 aaKnown RBP16.2■□□□□ 0.18
PRKCH-219ENST00000555906 POU1F1P28069 291 aa16.2■□□□□ 0.18
PRKCH-219ENST00000555906 DCTDP32321 178 aa16.2■□□□□ 0.18
PRKCH-219ENST00000555906 ZNF788Q6ZQV5 615 aa16.2■□□□□ 0.18
PRKCH-219ENST00000555906 KCTD8Q6ZWB6 473 aa16.2■□□□□ 0.18
PRKCH-219ENST00000555906 TMEM179BQ7Z7N9 219 aa16.2■□□□□ 0.18
PRKCH-219ENST00000555906 Q8N7P7 452 aa16.2■□□□□ 0.18
PRKCH-219ENST00000555906 ANGPTL6Q8NI99 470 aa16.2■□□□□ 0.18
PRKCH-219ENST00000555906 GAFA1Q96PS6 74 aa16.2■□□□□ 0.18
PRKCH-219ENST00000555906 CCT8L2Q96SF2 557 aa16.2■□□□□ 0.18
PRKCH-219ENST00000555906 VPREB3Q9UKI3 123 aa16.2■□□□□ 0.18
PRKCH-219ENST00000555906 LRP12Q9Y561 859 aa16.2■□□□□ 0.18
PRKCH-219ENST00000555906 BTBD17A6NE02 478 aa16.19■□□□□ 0.18
PRKCH-219ENST00000555906 AQP12BA6NM10 295 aa16.19■□□□□ 0.18
PRKCH-219ENST00000555906 RNASEK-C17orf49H0YIS7 233 aa16.19■□□□□ 0.18
PRKCH-219ENST00000555906 NPFFO15130 113 aa16.19■□□□□ 0.18
PRKCH-219ENST00000555906 SIGLEC5O15389 551 aa16.19■□□□□ 0.18
PRKCH-219ENST00000555906 HMGN1P05114 100 aa16.19■□□□□ 0.18
PRKCH-219ENST00000555906 OSMP13725 252 aa16.19■□□□□ 0.18
PRKCH-219ENST00000555906 EEF1B2P24534 225 aaKnown RBP16.19■□□□□ 0.18
PRKCH-219ENST00000555906 PROK1P58294 105 aa16.19■□□□□ 0.18
PRKCH-219ENST00000555906 KRTAP10-3P60369 221 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms