RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 EMX1Q04741 257 aaPredicted RBP7.36□□□□□ -1.23
SYNE2-209ENST00000553308 BLMHQ13867 455 aa7.36□□□□□ -1.23
SYNE2-209ENST00000553308 TIGD6Q17RP2 521 aa7.36□□□□□ -1.23
SYNE2-209ENST00000553308 GFOD2Q3B7J2 385 aa7.36□□□□□ -1.23
SYNE2-209ENST00000553308 CGB2Q6NT52 195 aa7.36□□□□□ -1.23
SYNE2-209ENST00000553308 CCBE1Q6UXH8 406 aaPredicted RBP7.36□□□□□ -1.23
SYNE2-209ENST00000553308 MKXQ8IYA7 352 aa7.36□□□□□ -1.23
SYNE2-209ENST00000553308 FAM185AQ8N0U4 392 aa7.36□□□□□ -1.23
SYNE2-209ENST00000553308 WIPF2Q8TF74 440 aaPredicted RBP7.36□□□□□ -1.23
SYNE2-209ENST00000553308 RPL3LQ92901 407 aaKnown RBP7.36□□□□□ -1.23
SYNE2-209ENST00000553308 SGK3Q96BR1 496 aa7.36□□□□□ -1.23
SYNE2-209ENST00000553308 REEP6Q96HR9 211 aa7.36□□□□□ -1.23
SYNE2-209ENST00000553308 DDOQ99489 341 aa7.36□□□□□ -1.23
SYNE2-209ENST00000553308 FGF23Q9GZV9 251 aaPredicted RBP7.36□□□□□ -1.23
SYNE2-209ENST00000553308 MRGBPQ9NV56 204 aa7.36□□□□□ -1.23
SYNE2-209ENST00000553308 RHBDD3Q9Y3P4 386 aa7.36□□□□□ -1.23
SYNE2-209ENST00000553308 V9GYQ6 96 aa7.36□□□□□ -1.23
SYNE2-209ENST00000553308 A0A1W2PRX2 142 aa7.35□□□□□ -1.23
SYNE2-209ENST00000553308 IDH3BO43837 385 aa7.35□□□□□ -1.23
SYNE2-209ENST00000553308 GADD45GO95257 159 aa7.35□□□□□ -1.23
SYNE2-209ENST00000553308 ANXA2P07355 339 aaKnown RBP7.35□□□□□ -1.23
SYNE2-209ENST00000553308 ACAA1P09110 424 aaPredicted RBP7.35□□□□□ -1.23
SYNE2-209ENST00000553308 CD33P20138 364 aa7.35□□□□□ -1.23
SYNE2-209ENST00000553308 GABRA2P47869 451 aa7.35□□□□□ -1.23
SYNE2-209ENST00000553308 GSSP48637 474 aa7.35□□□□□ -1.23
SYNE2-209ENST00000553308 GSK3AP49840 483 aa7.35□□□□□ -1.23
SYNE2-209ENST00000553308 ENTPD1P49961 510 aa7.35□□□□□ -1.23
SYNE2-209ENST00000553308 SPIBQ01892 262 aa7.35□□□□□ -1.23
SYNE2-209ENST00000553308 KRT72Q14CN4 511 aa7.35□□□□□ -1.23
SYNE2-209ENST00000553308 AANATQ16613 207 aa7.35□□□□□ -1.23
SYNE2-209ENST00000553308 PLA1AQ53H76 456 aa7.35□□□□□ -1.23
SYNE2-209ENST00000553308 C8orf82Q6P1X6 216 aaPredicted RBP7.35□□□□□ -1.23
SYNE2-209ENST00000553308 LIAT1Q6ZQX7 453 aa7.35□□□□□ -1.23
SYNE2-209ENST00000553308 FAM57BQ71RH2 274 aa7.35□□□□□ -1.23
SYNE2-209ENST00000553308 PRSS45Q7RTY3 260 aa7.35□□□□□ -1.23
SYNE2-209ENST00000553308 Q8N2B8 174 aa7.35□□□□□ -1.23
SYNE2-209ENST00000553308 ZNF511Q8NB15 262 aa7.35□□□□□ -1.23
SYNE2-209ENST00000553308 ZNRF1Q8ND25 227 aa7.35□□□□□ -1.23
SYNE2-209ENST00000553308 TMEM185AQ8NFB2 350 aa7.35□□□□□ -1.23
SYNE2-209ENST00000553308 OR5D13Q8NGL4 314 aa7.35□□□□□ -1.23
SYNE2-209ENST00000553308 OR10Z1Q8NGY1 313 aa7.35□□□□□ -1.23
SYNE2-209ENST00000553308 OR2T4Q8NH00 348 aa7.35□□□□□ -1.23
SYNE2-209ENST00000553308 MED30Q96HR3 178 aa7.35□□□□□ -1.23
SYNE2-209ENST00000553308 OR5M11Q96RB7 305 aa7.35□□□□□ -1.23
SYNE2-209ENST00000553308 MICU1Q9BPX6 476 aa7.35□□□□□ -1.23
SYNE2-209ENST00000553308 KCTD14Q9BQ13 255 aaPredicted RBP7.35□□□□□ -1.23
SYNE2-209ENST00000553308 RTL8AQ9BWD3 113 aa7.35□□□□□ -1.23
SYNE2-209ENST00000553308 EGLN3Q9H6Z9 239 aa7.35□□□□□ -1.23
SYNE2-209ENST00000553308 C19orf12Q9NSK7 152 aa7.35□□□□□ -1.23
SYNE2-209ENST00000553308 FGFR1OP2Q9NVK5 253 aa7.35□□□□□ -1.23
SYNE2-209ENST00000553308 DNAJC27Q9NZQ0 273 aa7.35□□□□□ -1.23
SYNE2-209ENST00000553308 ZNF319Q9P2F9 582 aa7.35□□□□□ -1.23
SYNE2-209ENST00000553308 NLKQ9UBE8 527 aa7.35□□□□□ -1.23
SYNE2-209ENST00000553308 IGKV1D-17A0A075B6S4 117 aa7.34□□□□□ -1.23
SYNE2-209ENST00000553308 DHRS12A0PJE2 317 aa7.34□□□□□ -1.23
SYNE2-209ENST00000553308 ANXA2P2A6NMY6 339 aa7.34□□□□□ -1.23
SYNE2-209ENST00000553308 OR2AT4A6NND4 320 aa7.34□□□□□ -1.23
SYNE2-209ENST00000553308 ZNF850A8MQ14 1090 aa7.34□□□□□ -1.23
SYNE2-209ENST00000553308 HMGB1P1B2RPK0 211 aaPredicted RBP7.34□□□□□ -1.23
SYNE2-209ENST00000553308 ZNF593O00488 134 aaPredicted RBP7.34□□□□□ -1.23
SYNE2-209ENST00000553308 RHBDL1O75783 438 aa7.34□□□□□ -1.23
SYNE2-209ENST00000553308 GYPBP06028 91 aa7.34□□□□□ -1.23
SYNE2-209ENST00000553308 CLUP10909 449 aa7.34□□□□□ -1.23
SYNE2-209ENST00000553308 COX7A1P24310 79 aa7.34□□□□□ -1.23
SYNE2-209ENST00000553308 ACKR3P25106 362 aa7.34□□□□□ -1.23
SYNE2-209ENST00000553308 HSD11B1P28845 292 aa7.34□□□□□ -1.23
SYNE2-209ENST00000553308 RAB13P51153 203 aa7.34□□□□□ -1.23
SYNE2-209ENST00000553308 ZNF121P58317 390 aaPredicted RBP7.34□□□□□ -1.23
SYNE2-209ENST00000553308 ERVFRD-1P60508 538 aa7.34□□□□□ -1.23
SYNE2-209ENST00000553308 GRB2P62993 217 aaKnown RBP7.34□□□□□ -1.23
SYNE2-209ENST00000553308 IL5RAQ01344 420 aa7.34□□□□□ -1.23
SYNE2-209ENST00000553308 PRDX4Q13162 271 aa7.34□□□□□ -1.23
SYNE2-209ENST00000553308 TMEM95Q3KNT9 176 aa7.34□□□□□ -1.23
SYNE2-209ENST00000553308 Q6ZS46 218 aa7.34□□□□□ -1.23
SYNE2-209ENST00000553308 KCTD8Q6ZWB6 473 aa7.34□□□□□ -1.23
SYNE2-209ENST00000553308 LHFPL4Q7Z7J7 247 aa7.34□□□□□ -1.23
SYNE2-209ENST00000553308 TMEM219Q86XT9 240 aa7.34□□□□□ -1.23
SYNE2-209ENST00000553308 DYNAPQ8N1N2 210 aa7.34□□□□□ -1.23
SYNE2-209ENST00000553308 SLC37A3Q8NCC5 494 aa7.34□□□□□ -1.23
SYNE2-209ENST00000553308 CSNK2A3Q8NEV1 391 aa7.34□□□□□ -1.23
SYNE2-209ENST00000553308 HPSE2Q8WWQ2 592 aa7.34□□□□□ -1.23
SYNE2-209ENST00000553308 CDCA4Q9BXL8 241 aa7.34□□□□□ -1.23
SYNE2-209ENST00000553308 BRD7Q9NPI1 651 aa7.34□□□□□ -1.23
SYNE2-209ENST00000553308 DCAF13Q9NV06 445 aaKnown RBP7.34□□□□□ -1.23
SYNE2-209ENST00000553308 ZNF222Q9UK12 451 aa7.34□□□□□ -1.23
SYNE2-209ENST00000553308 TCF19Q9Y242 345 aa7.34□□□□□ -1.23
SYNE2-209ENST00000553308 TRBV23-1A0A0A0MS06 115 aa7.33□□□□□ -1.24
SYNE2-209ENST00000553308 WI2-2373I1.2A0A1W2PRP0 233 aa7.33□□□□□ -1.24
SYNE2-209ENST00000553308 TMEM210A6NLX4 147 aa7.33□□□□□ -1.24
SYNE2-209ENST00000553308 SEMG1P04279 462 aa7.33□□□□□ -1.24
SYNE2-209ENST00000553308 PSG2P11465 335 aa7.33□□□□□ -1.24
SYNE2-209ENST00000553308 COX4I1P13073 169 aa7.33□□□□□ -1.24
SYNE2-209ENST00000553308 CCL3L1P16619 93 aa7.33□□□□□ -1.24
SYNE2-209ENST00000553308 GLRA1P23415 457 aa7.33□□□□□ -1.24
SYNE2-209ENST00000553308 CFL1P23528 166 aaKnown RBP7.33□□□□□ -1.24
SYNE2-209ENST00000553308 FMO3P31513 532 aa7.33□□□□□ -1.24
SYNE2-209ENST00000553308 DCTDP32321 178 aa7.33□□□□□ -1.24
SYNE2-209ENST00000553308 SLC15A1P46059 708 aa7.33□□□□□ -1.24
SYNE2-209ENST00000553308 SMIM11AP58511 58 aa7.33□□□□□ -1.24
SYNE2-209ENST00000553308 KRTAP10-11P60412 298 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms