RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 PRPF19Q9UMS4 504 aaKnown RBP6.27□□□□□ -1.41
NEK3-201ENST00000550331 FAM96BQ9Y3D0 163 aa6.27□□□□□ -1.41
NEK3-201ENST00000550331 LYVE1Q9Y5Y7 322 aa6.27□□□□□ -1.41
NEK3-201ENST00000550331 IGHV3OR15-7A0A075B7D8 119 aa6.26□□□□□ -1.41
NEK3-201ENST00000550331 hCG_38984A0A1B0GV85 526 aa6.26□□□□□ -1.41
NEK3-201ENST00000550331 DHRS12A0PJE2 317 aa6.26□□□□□ -1.41
NEK3-201ENST00000550331 BTBD17A6NE02 478 aa6.26□□□□□ -1.41
NEK3-201ENST00000550331 SLC22A31A6NKX4 558 aa6.26□□□□□ -1.41
NEK3-201ENST00000550331 ANXA2P2A6NMY6 339 aa6.26□□□□□ -1.41
NEK3-201ENST00000550331 TNFRSF11BO00300 401 aa6.26□□□□□ -1.41
NEK3-201ENST00000550331 TBX1O43435 398 aa6.26□□□□□ -1.41
NEK3-201ENST00000550331 NDUFB3O43676 98 aa6.26□□□□□ -1.41
NEK3-201ENST00000550331 CCNB2O95067 398 aa6.26□□□□□ -1.41
NEK3-201ENST00000550331 GASTP01350 101 aa6.26□□□□□ -1.41
NEK3-201ENST00000550331 IFNGP01579 166 aa6.26□□□□□ -1.41
NEK3-201ENST00000550331 ANXA2P07355 339 aaKnown RBP6.26□□□□□ -1.41
NEK3-201ENST00000550331 FBP1P09467 338 aa6.26□□□□□ -1.41
NEK3-201ENST00000550331 ZNF3P17036 446 aa6.26□□□□□ -1.41
NEK3-201ENST00000550331 HSD11B1P28845 292 aa6.26□□□□□ -1.41
NEK3-201ENST00000550331 MSX2P35548 267 aaPredicted RBP6.26□□□□□ -1.41
NEK3-201ENST00000550331 GNALP38405 381 aa6.26□□□□□ -1.41
NEK3-201ENST00000550331 MAGEA2P43356 314 aa6.26□□□□□ -1.41
NEK3-201ENST00000550331 KRTAP10-3P60369 221 aa6.26□□□□□ -1.41
NEK3-201ENST00000550331 IL5RAQ01344 420 aa6.26□□□□□ -1.41
NEK3-201ENST00000550331 EIF2B1Q14232 305 aaKnown RBP6.26□□□□□ -1.41
NEK3-201ENST00000550331 LRRC10Q5BKY1 277 aa6.26□□□□□ -1.41
NEK3-201ENST00000550331 ATPAF1Q5TC12 328 aaPredicted RBP6.26□□□□□ -1.41
NEK3-201ENST00000550331 LINC01590Q5TEZ4 76 aa6.26□□□□□ -1.41
NEK3-201ENST00000550331 DHRS7BQ6IAN0 325 aaPredicted RBP6.26□□□□□ -1.41
NEK3-201ENST00000550331 ASPHD2Q6ICH7 369 aa6.26□□□□□ -1.41
NEK3-201ENST00000550331 Q6ZSV7 163 aa6.26□□□□□ -1.41
NEK3-201ENST00000550331 PRSS45Q7RTY3 260 aa6.26□□□□□ -1.41
NEK3-201ENST00000550331 DPY19L4Q7Z388 723 aa6.26□□□□□ -1.41
NEK3-201ENST00000550331 FAM216BQ8N7L0 139 aa6.26□□□□□ -1.41
NEK3-201ENST00000550331 AQP11Q8NBQ7 271 aa6.26□□□□□ -1.41
NEK3-201ENST00000550331 CSNK2A3Q8NEV1 391 aa6.26□□□□□ -1.41
NEK3-201ENST00000550331 OR6K6Q8NGW6 343 aa6.26□□□□□ -1.41
NEK3-201ENST00000550331 OR10Z1Q8NGY1 313 aa6.26□□□□□ -1.41
NEK3-201ENST00000550331 C8orf46Q8TAG6 207 aa6.26□□□□□ -1.41
NEK3-201ENST00000550331 SGK3Q96BR1 496 aa6.26□□□□□ -1.41
NEK3-201ENST00000550331 CDRT15Q96T59 188 aa6.26□□□□□ -1.41
NEK3-201ENST00000550331 CCL13Q99616 98 aa6.26□□□□□ -1.41
NEK3-201ENST00000550331 MICU1Q9BPX6 476 aa6.26□□□□□ -1.41
NEK3-201ENST00000550331 DCTN5Q9BTE1 182 aa6.26□□□□□ -1.41
NEK3-201ENST00000550331 TSSK6Q9BXA6 273 aa6.26□□□□□ -1.41
NEK3-201ENST00000550331 DNTTIP1Q9H147 329 aa6.26□□□□□ -1.41
NEK3-201ENST00000550331 C16orf95Q9H693 158 aa6.26□□□□□ -1.41
NEK3-201ENST00000550331 ZNRD1Q9P1U0 126 aa6.26□□□□□ -1.41
NEK3-201ENST00000550331 ONECUT1Q9UBC0 465 aa6.26□□□□□ -1.41
NEK3-201ENST00000550331 N6AMT1Q9Y5N5 214 aa6.26□□□□□ -1.41
NEK3-201ENST00000550331 A0A1B0GW55 424 aa6.25□□□□□ -1.41
NEK3-201ENST00000550331 NKX6-3A6NJ46 265 aa6.25□□□□□ -1.41
NEK3-201ENST00000550331 TMEM210A6NLX4 147 aa6.25□□□□□ -1.41
NEK3-201ENST00000550331 RIIAD1A6NNX1 92 aa6.25□□□□□ -1.41
NEK3-201ENST00000550331 ACOT8O14734 319 aa6.25□□□□□ -1.41
NEK3-201ENST00000550331 CDIPTO14735 213 aa6.25□□□□□ -1.41
NEK3-201ENST00000550331 NPFFO15130 113 aa6.25□□□□□ -1.41
NEK3-201ENST00000550331 SNX3O60493 162 aa6.25□□□□□ -1.41
NEK3-201ENST00000550331 TSPAN9O75954 239 aa6.25□□□□□ -1.41
NEK3-201ENST00000550331 GYPBP06028 91 aa6.25□□□□□ -1.41
NEK3-201ENST00000550331 DUX4L2P0CJ85 424 aa6.25□□□□□ -1.41
NEK3-201ENST00000550331 DUX4L3P0CJ86 424 aa6.25□□□□□ -1.41
NEK3-201ENST00000550331 DUX4L4P0CJ87 422 aa6.25□□□□□ -1.41
NEK3-201ENST00000550331 DUX4L5P0CJ88 424 aa6.25□□□□□ -1.41
NEK3-201ENST00000550331 DUX4L6P0CJ89 424 aa6.25□□□□□ -1.41
NEK3-201ENST00000550331 DUX4L7P0CJ90 424 aa6.25□□□□□ -1.41
NEK3-201ENST00000550331 CLUP10909 449 aa6.25□□□□□ -1.41
NEK3-201ENST00000550331 EEF1B2P24534 225 aaKnown RBP6.25□□□□□ -1.41
NEK3-201ENST00000550331 TGFBR2P37173 567 aa6.25□□□□□ -1.41
NEK3-201ENST00000550331 OPRL1P41146 370 aa6.25□□□□□ -1.41
NEK3-201ENST00000550331 TGM4P49221 684 aa6.25□□□□□ -1.41
NEK3-201ENST00000550331 ZNF121P58317 390 aaPredicted RBP6.25□□□□□ -1.41
NEK3-201ENST00000550331 CSNK2BP67870 215 aa6.25□□□□□ -1.41
NEK3-201ENST00000550331 ACSM1Q08AH1 577 aa6.25□□□□□ -1.41
NEK3-201ENST00000550331 MICAQ29983 383 aa6.25□□□□□ -1.41
NEK3-201ENST00000550331 C2orf68Q2NKX9 166 aa6.25□□□□□ -1.41
NEK3-201ENST00000550331 KLHL12Q53G59 568 aa6.25□□□□□ -1.41
NEK3-201ENST00000550331 NCR3LG1Q68D85 454 aa6.25□□□□□ -1.41
NEK3-201ENST00000550331 STUMQ69YW2 141 aa6.25□□□□□ -1.41
NEK3-201ENST00000550331 DUX4L9Q6RFH8 374 aaPredicted RBP6.25□□□□□ -1.41
NEK3-201ENST00000550331 C16orf89Q6UX73 402 aa6.25□□□□□ -1.41
NEK3-201ENST00000550331 C1orf122Q6ZSJ8 110 aa6.25□□□□□ -1.41
NEK3-201ENST00000550331 PDZD9Q8IXQ8 264 aa6.25□□□□□ -1.41
NEK3-201ENST00000550331 FGFRL1Q8N441 504 aa6.25□□□□□ -1.41
NEK3-201ENST00000550331 OR6N2Q8NGY6 317 aa6.25□□□□□ -1.41
NEK3-201ENST00000550331 OR4Q3Q8NH05 313 aa6.25□□□□□ -1.41
NEK3-201ENST00000550331 OR5R1Q8NH85 324 aa6.25□□□□□ -1.41
NEK3-201ENST00000550331 RNF133Q8WVZ7 376 aa6.25□□□□□ -1.41
NEK3-201ENST00000550331 INTS14Q96SY0 518 aa6.25□□□□□ -1.41
NEK3-201ENST00000550331 ABHD6Q9BV23 337 aa6.25□□□□□ -1.41
NEK3-201ENST00000550331 RTL8AQ9BWD3 113 aa6.25□□□□□ -1.41
NEK3-201ENST00000550331 PAPOLGQ9BWT3 736 aaKnown RBP6.25□□□□□ -1.41
NEK3-201ENST00000550331 DGCR6LQ9BY27 220 aa6.25□□□□□ -1.41
NEK3-201ENST00000550331 OR10A2Q9H208 303 aa6.25□□□□□ -1.41
NEK3-201ENST00000550331 MAGIXQ9H6Y5 334 aa6.25□□□□□ -1.41
NEK3-201ENST00000550331 TCF7L1Q9HCS4 588 aa6.25□□□□□ -1.41
NEK3-201ENST00000550331 CMC2Q9NRP2 79 aa6.25□□□□□ -1.41
NEK3-201ENST00000550331 ARMC1Q9NVT9 282 aa6.25□□□□□ -1.41
NEK3-201ENST00000550331 ACTR3BQ9P1U1 418 aa6.25□□□□□ -1.41
NEK3-201ENST00000550331 DUX4Q9UBX2 424 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms