RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 PDLIM1O00151 329 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 FAAHO00519 579 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 SH2D1BO14796 132 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 OR10H3O60404 316 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 NPIPB7O75200 414 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 SOX14O95416 240 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 BGLAPP02818 100 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 PNMTP11086 282 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 ANPEPP15144 967 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 ELK4P28324 431 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 AQP2P41181 271 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 CA7P43166 264 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 ST3GAL3Q11203 375 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 ZNF239Q16600 458 aaKnown RBP3.16□□□□□ -1.9
APAF1-208ENST00000549007 KCTD21Q4G0X4 260 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 OTUD3Q5T2D3 398 aaPredicted RBP3.16□□□□□ -1.9
APAF1-208ENST00000549007 C9orf135Q5VTT2 229 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 OTPQ5XKR4 325 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 CARD17Q5XLA6 110 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 ASPHD2Q6ICH7 369 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 OR2T5Q6IEZ7 315 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 FCRLAQ7L513 359 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 OR2T29Q8NH02 315 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 SMAP2Q8WU79 429 aaPredicted RBP3.16□□□□□ -1.9
APAF1-208ENST00000549007 SORCS2Q96PQ0 1159 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 SSX3Q99909 188 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 EMC6Q9BV81 110 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 TAPBPLQ9BX59 468 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 C1QTNF4Q9BXJ3 329 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 UCK2Q9BZX2 261 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 EVA1AQ9H8M9 152 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 CLCF1Q9UBD9 225 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 ZNF835Q9Y2P0 537 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 AP4S1Q9Y587 144 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 AP4B1Q9Y6B7 739 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 PRR14LQ5THK1 2151 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 INTS1Q8N201 2190 aaKnown RBP3.16□□□□□ -1.9
APAF1-208ENST00000549007 MED12LQ86YW9 2145 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 UBR5O95071 2799 aaPredicted RBP3.16□□□□□ -1.9
APAF1-208ENST00000549007 TRAV36DV7A0A075B6V5 113 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 NKX2-6A6NCS4 301 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 FTCDNL1E5RQL4 147 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 BCKDKO14874 412 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 ALPLP05186 524 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 CPN1P15169 458 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 GTF2E2P29084 291 aaKnown RBP3.16□□□□□ -1.9
APAF1-208ENST00000549007 MAGEA2P43356 314 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 LINC01547P58512 204 aaPredicted RBP3.16□□□□□ -1.9
APAF1-208ENST00000549007 P2RY14Q15391 338 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 TSC22D1Q15714 1073 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 ZSWIM7Q19AV6 140 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 LRRC36Q1X8D7 754 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 CLEC12AQ5QGZ9 265 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 NCR3LG1Q68D85 454 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 NUFIP2Q7Z417 695 aaKnown RBP3.16□□□□□ -1.9
APAF1-208ENST00000549007 LUZP2Q86TE4 346 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 CLDN22Q8N7P3 220 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 RPL3LQ92901 407 aaKnown RBP3.16□□□□□ -1.9
APAF1-208ENST00000549007 SGTBQ96EQ0 304 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 RAB40CQ96S21 281 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 TTYH2Q9BSA4 534 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 KRTAP4-8Q9BYQ9 185 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 REEP1Q9H902 201 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 MARCH7Q9H992 704 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 NTN4Q9HB63 628 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 MED29Q9NX70 200 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 PDP1Q9P0J1 537 aaPredicted RBP3.16□□□□□ -1.9
APAF1-208ENST00000549007 ERVK-18Q9QC07 812 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 MIOXQ9UGB7 285 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 MEMO1Q9Y316 297 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 MED31Q9Y3C7 131 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 MRPS18CQ9Y3D5 142 aaKnown RBP3.16□□□□□ -1.9
APAF1-208ENST00000549007 FREM1Q5H8C1 2179 aa3.16□□□□□ -1.9
APAF1-208ENST00000549007 DOPEY1Q5JWR5 2465 aa3.15□□□□□ -1.9
APAF1-208ENST00000549007 USP9YO00507 2555 aaPredicted RBP3.15□□□□□ -1.9
APAF1-208ENST00000549007 EEF1E1-BLOC1S5C9J1V9 151 aa3.15□□□□□ -1.9
APAF1-208ENST00000549007 H7C1C5 153 aa3.15□□□□□ -1.9
APAF1-208ENST00000549007 M0R129 80 aa3.15□□□□□ -1.9
APAF1-208ENST00000549007 IMPA2O14732 288 aa3.15□□□□□ -1.9
APAF1-208ENST00000549007 CLOCKO15516 846 aa3.15□□□□□ -1.9
APAF1-208ENST00000549007 EEF1E1O43324 174 aaKnown RBP3.15□□□□□ -1.9
APAF1-208ENST00000549007 ZNF208O43345 1280 aa3.15□□□□□ -1.9
APAF1-208ENST00000549007 DFFBO76075 338 aa3.15□□□□□ -1.9
APAF1-208ENST00000549007 STSP08842 583 aa3.15□□□□□ -1.9
APAF1-208ENST00000549007 ADORA3P0DMS8 318 aa3.15□□□□□ -1.9
APAF1-208ENST00000549007 ZNF23P17027 643 aa3.15□□□□□ -1.9
APAF1-208ENST00000549007 ZNF26P17031 533 aaPredicted RBP3.15□□□□□ -1.9
APAF1-208ENST00000549007 FOXG1P55316 489 aaPredicted RBP3.15□□□□□ -1.9
APAF1-208ENST00000549007 LCN6P62502 163 aa3.15□□□□□ -1.9
APAF1-208ENST00000549007 ELF3P78545 371 aaPredicted RBP3.15□□□□□ -1.9
APAF1-208ENST00000549007 POU3F1Q03052 451 aaPredicted RBP3.15□□□□□ -1.9
APAF1-208ENST00000549007 PMS2P3Q13401 168 aa3.15□□□□□ -1.9
APAF1-208ENST00000549007 RCN1Q15293 331 aa3.15□□□□□ -1.9
APAF1-208ENST00000549007 TAF13Q15543 124 aa3.15□□□□□ -1.9
APAF1-208ENST00000549007 ZNF74Q16587 644 aa3.15□□□□□ -1.9
APAF1-208ENST00000549007 STEAP1BQ6NZ63 245 aa3.15□□□□□ -1.9
APAF1-208ENST00000549007 Q6ZPB1 254 aaPredicted RBP3.15□□□□□ -1.9
APAF1-208ENST00000549007 Q6ZRG5 221 aa3.15□□□□□ -1.9
APAF1-208ENST00000549007 RFPL4BQ6ZWI9 263 aa3.15□□□□□ -1.9
APAF1-208ENST00000549007 NANOGNBQ7Z5D8 188 aa3.15□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 148.6 ms