RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 TGFBR1P36897 503 aa4.24□□□□□ -1.73
APP-217ENST00000548570 CDKN1AP38936 164 aa4.24□□□□□ -1.73
APP-217ENST00000548570 SOX2P48431 317 aa4.24□□□□□ -1.73
APP-217ENST00000548570 EVX1P49640 407 aa4.24□□□□□ -1.73
APP-217ENST00000548570 KLF3P57682 345 aaPredicted RBP4.24□□□□□ -1.73
APP-217ENST00000548570 FABP5Q01469 135 aa4.24□□□□□ -1.73
APP-217ENST00000548570 MRPL28Q13084 256 aaKnown RBP4.24□□□□□ -1.73
APP-217ENST00000548570 GPR50Q13585 617 aa4.24□□□□□ -1.73
APP-217ENST00000548570 C11orf91Q3C1V1 193 aa4.24□□□□□ -1.73
APP-217ENST00000548570 CEP78Q5JTW2 689 aa4.24□□□□□ -1.73
APP-217ENST00000548570 SLC16A12Q6ZSM3 486 aa4.24□□□□□ -1.73
APP-217ENST00000548570 DOK3Q7L591 496 aa4.24□□□□□ -1.73
APP-217ENST00000548570 FAM220AQ7Z4H9 259 aa4.24□□□□□ -1.73
APP-217ENST00000548570 LRRTM1Q86UE6 522 aa4.24□□□□□ -1.73
APP-217ENST00000548570 NR2C2APQ86WQ0 139 aa4.24□□□□□ -1.73
APP-217ENST00000548570 C1orf174Q8IYL3 243 aa4.24□□□□□ -1.73
APP-217ENST00000548570 MUC15Q8N387 334 aa4.24□□□□□ -1.73
APP-217ENST00000548570 PARP16Q8N5Y8 322 aa4.24□□□□□ -1.73
APP-217ENST00000548570 BHLHE23Q8NDY6 225 aa4.24□□□□□ -1.73
APP-217ENST00000548570 OR10AD1Q8NGE0 317 aa4.24□□□□□ -1.73
APP-217ENST00000548570 OR51A2Q8NGJ7 313 aa4.24□□□□□ -1.73
APP-217ENST00000548570 OR5L1Q8NGL2 311 aa4.24□□□□□ -1.73
APP-217ENST00000548570 OR13F1Q8NGS4 319 aa4.24□□□□□ -1.73
APP-217ENST00000548570 OR5AK2Q8NH90 309 aa4.24□□□□□ -1.73
APP-217ENST00000548570 RPL3LQ92901 407 aaKnown RBP4.24□□□□□ -1.73
APP-217ENST00000548570 YIPF5Q969M3 257 aa4.24□□□□□ -1.73
APP-217ENST00000548570 FBXW5Q969U6 566 aa4.24□□□□□ -1.73
APP-217ENST00000548570 FGGYQ96C11 551 aa4.24□□□□□ -1.73
APP-217ENST00000548570 CYYR1Q96J86 154 aa4.24□□□□□ -1.73
APP-217ENST00000548570 SORCS2Q96PQ0 1159 aa4.24□□□□□ -1.73
APP-217ENST00000548570 DERL3Q96Q80 235 aa4.24□□□□□ -1.73
APP-217ENST00000548570 OR14A2Q96R54 314 aa4.24□□□□□ -1.73
APP-217ENST00000548570 OR51E2Q9H255 320 aa4.24□□□□□ -1.73
APP-217ENST00000548570 RGCCQ9H4X1 137 aa4.24□□□□□ -1.73
APP-217ENST00000548570 C7orf69Q9H7B7 122 aa4.24□□□□□ -1.73
APP-217ENST00000548570 UBTD1Q9HAC8 227 aa4.24□□□□□ -1.73
APP-217ENST00000548570 TUBG2Q9NRH3 451 aa4.24□□□□□ -1.73
APP-217ENST00000548570 ZNF275Q9NSD4 429 aaPredicted RBP4.24□□□□□ -1.73
APP-217ENST00000548570 CBLN4Q9NTU7 201 aa4.24□□□□□ -1.73
APP-217ENST00000548570 NDUFB11Q9NX14 153 aa4.24□□□□□ -1.73
APP-217ENST00000548570 CHCHD3Q9NX63 227 aaKnown RBP4.24□□□□□ -1.73
APP-217ENST00000548570 DCAF16Q9NXF7 216 aa4.24□□□□□ -1.73
APP-217ENST00000548570 TAAR3PQ9P1P4 343 aa4.24□□□□□ -1.73
APP-217ENST00000548570 POU2F3Q9UKI9 436 aa4.24□□□□□ -1.73
APP-217ENST00000548570 LAMP3Q9UQV4 416 aa4.24□□□□□ -1.73
APP-217ENST00000548570 PIGLQ9Y2B2 252 aa4.24□□□□□ -1.73
APP-217ENST00000548570 CMAHPQ9Y471 501 aa4.24□□□□□ -1.73
APP-217ENST00000548570 CACNG2Q9Y698 323 aa4.24□□□□□ -1.73
APP-217ENST00000548570 LRBAP50851 2863 aa4.24□□□□□ -1.73
APP-217ENST00000548570 VPS13CQ709C8 3753 aa4.24□□□□□ -1.73
APP-217ENST00000548570 UNC79Q9P2D8 2635 aa4.24□□□□□ -1.73
APP-217ENST00000548570 MPDZO75970 2070 aa4.23□□□□□ -1.73
APP-217ENST00000548570 HECTD1Q9ULT8 2610 aa4.23□□□□□ -1.73
APP-217ENST00000548570 ZNF816-ZNF321PA0A0X1KG74 233 aa4.23□□□□□ -1.73
APP-217ENST00000548570 A0A1B0GVI7 797 aa4.23□□□□□ -1.73
APP-217ENST00000548570 TRDV1A0A1B0GX56 115 aa4.23□□□□□ -1.73
APP-217ENST00000548570 PQLC2LA1A4F0 135 aa4.23□□□□□ -1.73
APP-217ENST00000548570 GGT3PA6NGU5 568 aa4.23□□□□□ -1.73
APP-217ENST00000548570 DHRS7CA6NNS2 312 aa4.23□□□□□ -1.73
APP-217ENST00000548570 ZNF850A8MQ14 1090 aa4.23□□□□□ -1.73
APP-217ENST00000548570 C17orf100A8MU93 164 aa4.23□□□□□ -1.73
APP-217ENST00000548570 VSTM5A8MXK1 200 aa4.23□□□□□ -1.73
APP-217ENST00000548570 F5H5P2 479 aa4.23□□□□□ -1.73
APP-217ENST00000548570 F8VVB4 439 aa4.23□□□□□ -1.73
APP-217ENST00000548570 F8VWA3 439 aa4.23□□□□□ -1.73
APP-217ENST00000548570 LYNX1G3V0Z9 82 aa4.23□□□□□ -1.73
APP-217ENST00000548570 CCRL2O00421 344 aa4.23□□□□□ -1.73
APP-217ENST00000548570 GABRPO00591 440 aa4.23□□□□□ -1.73
APP-217ENST00000548570 IGHV4-39P01824 125 aa4.23□□□□□ -1.73
APP-217ENST00000548570 CD55P08174 381 aa4.23□□□□□ -1.73
APP-217ENST00000548570 UCHL1P09936 223 aa4.23□□□□□ -1.73
APP-217ENST00000548570 UBCP0CG48 685 aaKnown RBP4.23□□□□□ -1.73
APP-217ENST00000548570 LYNX1P0DP58 116 aa4.23□□□□□ -1.73
APP-217ENST00000548570 PAX1P15863 534 aa4.23□□□□□ -1.73
APP-217ENST00000548570 GADD45AP24522 165 aa4.23□□□□□ -1.73
APP-217ENST00000548570 COL8A2P25067 703 aa4.23□□□□□ -1.73
APP-217ENST00000548570 PSMB9P28065 219 aa4.23□□□□□ -1.73
APP-217ENST00000548570 GCH1P30793 250 aa4.23□□□□□ -1.73
APP-217ENST00000548570 SSTR2P30874 369 aa4.23□□□□□ -1.73
APP-217ENST00000548570 DDOSTP39656 456 aa4.23□□□□□ -1.73
APP-217ENST00000548570 PPOXP50336 477 aa4.23□□□□□ -1.73
APP-217ENST00000548570 TAS2R43P59537 309 aa4.23□□□□□ -1.73
APP-217ENST00000548570 RPS23P62266 143 aaKnown RBP4.23□□□□□ -1.73
APP-217ENST00000548570 MALLQ13021 153 aa4.23□□□□□ -1.73
APP-217ENST00000548570 MPPED2Q15777 294 aa4.23□□□□□ -1.73
APP-217ENST00000548570 C21orf62-AS1Q17RA5 79 aa4.23□□□□□ -1.73
APP-217ENST00000548570 ZNF718Q3SXZ3 478 aa4.23□□□□□ -1.73
APP-217ENST00000548570 ACSM3Q53FZ2 586 aa4.23□□□□□ -1.73
APP-217ENST00000548570 YIF1BQ5BJH7 314 aa4.23□□□□□ -1.73
APP-217ENST00000548570 ZMAT1Q5H9K5 638 aa4.23□□□□□ -1.73
APP-217ENST00000548570 FAM76BQ5HYJ3 339 aa4.23□□□□□ -1.73
APP-217ENST00000548570 ZBTB37Q5TC79 503 aa4.23□□□□□ -1.73
APP-217ENST00000548570 TMEM244Q5VVB8 128 aa4.23□□□□□ -1.73
APP-217ENST00000548570 PRAMEF6Q5VXH4 476 aa4.23□□□□□ -1.73
APP-217ENST00000548570 PAMR1Q6UXH9 720 aa4.23□□□□□ -1.73
APP-217ENST00000548570 DNM1P46Q6ZS02 220 aa4.23□□□□□ -1.73
APP-217ENST00000548570 MRPL21Q7Z2W9 205 aaKnown RBP4.23□□□□□ -1.73
APP-217ENST00000548570 TMEM200AQ86VY9 491 aa4.23□□□□□ -1.73
APP-217ENST00000548570 ZNF676Q8N7Q3 588 aa4.23□□□□□ -1.73
APP-217ENST00000548570 SEMA6DQ8NFY4 1073 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms