RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 TBPP20226 339 aa7.71□□□□□ -1.18
CLIP1-218ENST00000545889 RTL8BQ17RB0 113 aa7.71□□□□□ -1.18
CLIP1-218ENST00000545889 Q499Y3 187 aa7.71□□□□□ -1.18
CLIP1-218ENST00000545889 PDZD11Q5EBL8 140 aa7.71□□□□□ -1.18
CLIP1-218ENST00000545889 BEX5Q5H9J7 111 aa7.71□□□□□ -1.18
CLIP1-218ENST00000545889 WDR74Q6RFH5 385 aaPredicted RBP7.71□□□□□ -1.18
CLIP1-218ENST00000545889 METAP1DQ6UB28 335 aaPredicted RBP7.71□□□□□ -1.18
CLIP1-218ENST00000545889 OR51A2Q8NGJ7 313 aa7.71□□□□□ -1.18
CLIP1-218ENST00000545889 APOBEC3DQ96AK3 386 aaPredicted RBP7.71□□□□□ -1.18
CLIP1-218ENST00000545889 RPEQ96AT9 228 aa7.71□□□□□ -1.18
CLIP1-218ENST00000545889 C14orf79Q96F83 325 aa7.71□□□□□ -1.18
CLIP1-218ENST00000545889 GPR137Q96N19 417 aa7.71□□□□□ -1.18
CLIP1-218ENST00000545889 OR51M1Q9H341 326 aa7.71□□□□□ -1.18
CLIP1-218ENST00000545889 UBQLN3Q9H347 655 aa7.71□□□□□ -1.18
CLIP1-218ENST00000545889 PLEKHF2Q9H8W4 249 aa7.71□□□□□ -1.18
CLIP1-218ENST00000545889 WDR1O75083 606 aa7.71□□□□□ -1.18
CLIP1-218ENST00000545889 NRASP01111 189 aa7.71□□□□□ -1.18
CLIP1-218ENST00000545889 UBBP0CG47 229 aa7.71□□□□□ -1.18
CLIP1-218ENST00000545889 ACP2P11117 423 aa7.71□□□□□ -1.18
CLIP1-218ENST00000545889 SELLP14151 372 aa7.71□□□□□ -1.18
CLIP1-218ENST00000545889 SRD5A2P31213 254 aa7.71□□□□□ -1.18
CLIP1-218ENST00000545889 GPR12P47775 334 aa7.71□□□□□ -1.18
CLIP1-218ENST00000545889 KLF3P57682 345 aaPredicted RBP7.71□□□□□ -1.18
CLIP1-218ENST00000545889 MAJINQ3KP22 176 aa7.71□□□□□ -1.18
CLIP1-218ENST00000545889 FAM122BQ7Z309 247 aa7.71□□□□□ -1.18
CLIP1-218ENST00000545889 ANGPTL5Q86XS5 388 aa7.71□□□□□ -1.18
CLIP1-218ENST00000545889 OR2M2Q96R28 347 aa7.71□□□□□ -1.18
CLIP1-218ENST00000545889 SDHCQ99643 169 aaPredicted RBP7.71□□□□□ -1.18
CLIP1-218ENST00000545889 ZNF649Q9BS31 505 aa7.71□□□□□ -1.18
CLIP1-218ENST00000545889 MFFQ9GZY8 342 aa7.71□□□□□ -1.18
CLIP1-218ENST00000545889 LPAR2Q9HBW0 351 aa7.71□□□□□ -1.18
CLIP1-218ENST00000545889 PURGQ9UJV8 347 aaKnown RBP7.71□□□□□ -1.18
CLIP1-218ENST00000545889 SNRNP200O75643 2136 aaKnown RBP7.71□□□□□ -1.18
CLIP1-218ENST00000545889 A0A0B4J293 547 aa7.71□□□□□ -1.18
CLIP1-218ENST00000545889 A0A0U1RQK1 487 aa7.71□□□□□ -1.18
CLIP1-218ENST00000545889 ASPDHA6ND91 283 aa7.71□□□□□ -1.18
CLIP1-218ENST00000545889 GOSR2O14653 212 aa7.71□□□□□ -1.18
CLIP1-218ENST00000545889 AGPAT2O15120 278 aa7.71□□□□□ -1.18
CLIP1-218ENST00000545889 CYTIPO60759 359 aa7.71□□□□□ -1.18
CLIP1-218ENST00000545889 CTSBP07858 339 aa7.71□□□□□ -1.18
CLIP1-218ENST00000545889 RPS2P15880 293 aaKnown RBP7.71□□□□□ -1.18
CLIP1-218ENST00000545889 TGIF1Q15583 401 aa7.71□□□□□ -1.18
CLIP1-218ENST00000545889 ZNF628Q5EBL2 1059 aa7.71□□□□□ -1.18
CLIP1-218ENST00000545889 BVESQ8NE79 360 aa7.71□□□□□ -1.18
CLIP1-218ENST00000545889 OR11H4Q8NGC9 324 aa7.71□□□□□ -1.18
CLIP1-218ENST00000545889 OR10D3Q8NH80 312 aa7.71□□□□□ -1.18
CLIP1-218ENST00000545889 OR10J5Q8NHC4 309 aa7.71□□□□□ -1.18
CLIP1-218ENST00000545889 TMEM230Q96A57 120 aa7.71□□□□□ -1.18
CLIP1-218ENST00000545889 SULT4A1Q9BR01 284 aa7.71□□□□□ -1.18
CLIP1-218ENST00000545889 SLC26A1Q9H2B4 701 aa7.71□□□□□ -1.18
CLIP1-218ENST00000545889 CCL27Q9Y4X3 112 aa7.71□□□□□ -1.18
CLIP1-218ENST00000545889 V9GYH0 126 aa7.71□□□□□ -1.18
CLIP1-218ENST00000545889 GBF1Q92538 1859 aa7.7□□□□□ -1.18
CLIP1-218ENST00000545889 A0A0A6YYD5 115 aa7.7□□□□□ -1.18
CLIP1-218ENST00000545889 IGHV5-10-1A0A0J9YXX1 117 aa7.7□□□□□ -1.18
CLIP1-218ENST00000545889 UPK1AO00322 258 aa7.7□□□□□ -1.18
CLIP1-218ENST00000545889 IGLV3-19P01714 112 aa7.7□□□□□ -1.18
CLIP1-218ENST00000545889 S100A11P31949 105 aa7.7□□□□□ -1.18
CLIP1-218ENST00000545889 DIO1P49895 249 aa7.7□□□□□ -1.18
CLIP1-218ENST00000545889 TNFAIP6P98066 277 aaPredicted RBP7.7□□□□□ -1.18
CLIP1-218ENST00000545889 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.7□□□□□ -1.18
CLIP1-218ENST00000545889 PLA1AQ53H76 456 aa7.7□□□□□ -1.18
CLIP1-218ENST00000545889 BRICD5Q6PL45 260 aa7.7□□□□□ -1.18
CLIP1-218ENST00000545889 PTOV1Q86YD1 416 aa7.7□□□□□ -1.18
CLIP1-218ENST00000545889 RIMKLAQ8IXN7 391 aa7.7□□□□□ -1.18
CLIP1-218ENST00000545889 ZDHHC23Q8IYP9 409 aa7.7□□□□□ -1.18
CLIP1-218ENST00000545889 BPIFB2Q8N4F0 458 aa7.7□□□□□ -1.18
CLIP1-218ENST00000545889 SLC7A13Q8TCU3 470 aa7.7□□□□□ -1.18
CLIP1-218ENST00000545889 GPR119Q8TDV5 335 aa7.7□□□□□ -1.18
CLIP1-218ENST00000545889 ANKRD9Q96BM1 317 aaPredicted RBP7.7□□□□□ -1.18
CLIP1-218ENST00000545889 WDR34Q96EX3 536 aa7.7□□□□□ -1.18
CLIP1-218ENST00000545889 PIK3IP1Q96FE7 263 aa7.7□□□□□ -1.18
CLIP1-218ENST00000545889 RSRP1Q9BUV0 290 aa7.7□□□□□ -1.18
CLIP1-218ENST00000545889 PBDC1Q9BVG4 233 aa7.7□□□□□ -1.18
CLIP1-218ENST00000545889 SLC25A31Q9H0C2 315 aa7.7□□□□□ -1.18
CLIP1-218ENST00000545889 ACER3Q9NUN7 267 aa7.7□□□□□ -1.18
CLIP1-218ENST00000545889 FBXO34Q9NWN3 711 aa7.7□□□□□ -1.18
CLIP1-218ENST00000545889 RNF150Q9ULK6 438 aa7.7□□□□□ -1.18
CLIP1-218ENST00000545889 C5orf42Q9H799 3197 aa7.7□□□□□ -1.18
CLIP1-218ENST00000545889 A8MXE2 369 aa7.7□□□□□ -1.18
CLIP1-218ENST00000545889 B4E171 279 aa7.7□□□□□ -1.18
CLIP1-218ENST00000545889 MPC2O95563 127 aa7.7□□□□□ -1.18
CLIP1-218ENST00000545889 TCRBP04435 133 aa7.7□□□□□ -1.18
CLIP1-218ENST00000545889 BMI1P35226 326 aa7.7□□□□□ -1.18
CLIP1-218ENST00000545889 TSPAN7P41732 249 aa7.7□□□□□ -1.18
CLIP1-218ENST00000545889 BATFQ16520 125 aa7.7□□□□□ -1.18
CLIP1-218ENST00000545889 GLIPR1L1Q6UWM5 242 aa7.7□□□□□ -1.18
CLIP1-218ENST00000545889 LYPD4Q6UWN0 246 aa7.7□□□□□ -1.18
CLIP1-218ENST00000545889 BBS1Q8NFJ9 593 aa7.7□□□□□ -1.18
CLIP1-218ENST00000545889 MS4A5Q9H3V2 200 aa7.7□□□□□ -1.18
CLIP1-218ENST00000545889 SONP18583 2426 aaKnown RBP7.7□□□□□ -1.18
CLIP1-218ENST00000545889 A0A1W2PRD5 423 aa7.7□□□□□ -1.18
CLIP1-218ENST00000545889 A0A1W2PRF3 423 aa7.7□□□□□ -1.18
CLIP1-218ENST00000545889 A0A1W2PRM7 423 aa7.7□□□□□ -1.18
CLIP1-218ENST00000545889 MED6O75586 246 aa7.7□□□□□ -1.18
CLIP1-218ENST00000545889 GASTP01350 101 aa7.7□□□□□ -1.18
CLIP1-218ENST00000545889 GABRB1P18505 474 aa7.7□□□□□ -1.18
CLIP1-218ENST00000545889 AKR1C3P42330 323 aa7.7□□□□□ -1.18
CLIP1-218ENST00000545889 RPL18Q07020 188 aaKnown RBP7.7□□□□□ -1.18
CLIP1-218ENST00000545889 PMPCAQ10713 525 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms