RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 H3BMQ9 156 aa13.7□□□□□ -0.22
PRPF40A-212ENST00000545856 HS3ST1O14792 307 aa13.7□□□□□ -0.22
PRPF40A-212ENST00000545856 PIN1P1O15428 100 aa13.7□□□□□ -0.22
PRPF40A-212ENST00000545856 NRASP01111 189 aa13.7□□□□□ -0.22
PRPF40A-212ENST00000545856 OR4A8P0C604 315 aa13.7□□□□□ -0.22
PRPF40A-212ENST00000545856 CD37P11049 281 aa13.7□□□□□ -0.22
PRPF40A-212ENST00000545856 BDKRB2P30411 391 aa13.7□□□□□ -0.22
PRPF40A-212ENST00000545856 MPV17P39210 176 aa13.7□□□□□ -0.22
PRPF40A-212ENST00000545856 FUT6P51993 359 aa13.7□□□□□ -0.22
PRPF40A-212ENST00000545856 CEACAM21Q3KPI0 293 aa13.7□□□□□ -0.22
PRPF40A-212ENST00000545856 C20orf204Q6ZNR8 217 aa13.7□□□□□ -0.22
PRPF40A-212ENST00000545856 LHFPL2Q6ZUX7 228 aa13.7□□□□□ -0.22
PRPF40A-212ENST00000545856 TRMT61AQ96FX7 289 aaKnown RBP13.7□□□□□ -0.22
PRPF40A-212ENST00000545856 HS3ST6Q96QI5 342 aa13.7□□□□□ -0.22
PRPF40A-212ENST00000545856 MICU1Q9BPX6 476 aa13.7□□□□□ -0.22
PRPF40A-212ENST00000545856 UQCC2Q9BRT2 126 aa13.7□□□□□ -0.22
PRPF40A-212ENST00000545856 MRPL37Q9BZE1 423 aaKnown RBP13.7□□□□□ -0.22
PRPF40A-212ENST00000545856 MS4A5Q9H3V2 200 aa13.7□□□□□ -0.22
PRPF40A-212ENST00000545856 NKIRAS2Q9NYR9 191 aa13.7□□□□□ -0.22
PRPF40A-212ENST00000545856 DUSP13Q9UII6 198 aa13.7□□□□□ -0.22
PRPF40A-212ENST00000545856 A0A1W2PPW3 197 aa13.69□□□□□ -0.22
PRPF40A-212ENST00000545856 M0R233 179 aa13.69□□□□□ -0.22
PRPF40A-212ENST00000545856 OCMP0CE72 109 aaPredicted RBP13.69□□□□□ -0.22
PRPF40A-212ENST00000545856 PRF1P14222 555 aa13.69□□□□□ -0.22
PRPF40A-212ENST00000545856 ATF1P18846 271 aa13.69□□□□□ -0.22
PRPF40A-212ENST00000545856 TNFSF4P23510 183 aa13.69□□□□□ -0.22
PRPF40A-212ENST00000545856 MMP15P51511 669 aa13.69□□□□□ -0.22
PRPF40A-212ENST00000545856 SNRPD2P62316 118 aaKnown RBP13.69□□□□□ -0.22
PRPF40A-212ENST00000545856 DYNC1I2Q13409 638 aaKnown RBP13.69□□□□□ -0.22
PRPF40A-212ENST00000545856 PCGF3Q3KNV8 242 aa13.69□□□□□ -0.22
PRPF40A-212ENST00000545856 AGAP6Q5VW22 663 aa13.69□□□□□ -0.22
PRPF40A-212ENST00000545856 GLT8D1Q68CQ7 371 aa13.69□□□□□ -0.22
PRPF40A-212ENST00000545856 SP5Q6BEB4 398 aaPredicted RBP13.69□□□□□ -0.22
PRPF40A-212ENST00000545856 DTX2Q86UW9 622 aa13.69□□□□□ -0.22
PRPF40A-212ENST00000545856 MUC15Q8N387 334 aa13.69□□□□□ -0.22
PRPF40A-212ENST00000545856 RPL3LQ92901 407 aaKnown RBP13.69□□□□□ -0.22
PRPF40A-212ENST00000545856 PSMG3-AS1Q96PY0 264 aa13.69□□□□□ -0.22
PRPF40A-212ENST00000545856 SOX7Q9BT81 388 aa13.69□□□□□ -0.22
PRPF40A-212ENST00000545856 RTL8AQ9BWD3 113 aa13.69□□□□□ -0.22
PRPF40A-212ENST00000545856 C14orf119Q9NWQ9 140 aa13.69□□□□□ -0.22
PRPF40A-212ENST00000545856 RHBDD3Q9Y3P4 386 aa13.69□□□□□ -0.22
PRPF40A-212ENST00000545856 UTP20O75691 2785 aaKnown RBP13.68□□□□□ -0.22
PRPF40A-212ENST00000545856 CTAG2O75638 210 aa13.68□□□□□ -0.22
PRPF40A-212ENST00000545856 PTBP3O95758 552 aaKnown RBP13.68□□□□□ -0.22
PRPF40A-212ENST00000545856 RAB3BP20337 219 aa13.68□□□□□ -0.22
PRPF40A-212ENST00000545856 RBP2P50120 134 aa13.68□□□□□ -0.22
PRPF40A-212ENST00000545856 PPOXP50336 477 aa13.68□□□□□ -0.22
PRPF40A-212ENST00000545856 SCAND1P57086 179 aa13.68□□□□□ -0.22
PRPF40A-212ENST00000545856 PRDX4Q13162 271 aa13.68□□□□□ -0.22
PRPF40A-212ENST00000545856 RIN1Q13671 783 aa13.68□□□□□ -0.22
PRPF40A-212ENST00000545856 NKPD1Q17RQ9 610 aa13.68□□□□□ -0.22
PRPF40A-212ENST00000545856 VHLLQ6RSH7 139 aa13.68□□□□□ -0.22
PRPF40A-212ENST00000545856 PNLDC1Q8NA58 520 aaKnown RBP13.68□□□□□ -0.22
PRPF40A-212ENST00000545856 OR13C9Q8NGT0 318 aa13.68□□□□□ -0.22
PRPF40A-212ENST00000545856 ERGIC1Q969X5 290 aa13.68□□□□□ -0.22
PRPF40A-212ENST00000545856 C12orf43Q96C57 262 aaKnown RBP13.68□□□□□ -0.22
PRPF40A-212ENST00000545856 ITPKCQ96DU7 683 aa13.68□□□□□ -0.22
PRPF40A-212ENST00000545856 ADAT1Q9BUB4 502 aaKnown RBP13.68□□□□□ -0.22
PRPF40A-212ENST00000545856 METTL17Q9H7H0 456 aaPredicted RBP13.68□□□□□ -0.22
PRPF40A-212ENST00000545856 CBLN4Q9NTU7 201 aa13.68□□□□□ -0.22
PRPF40A-212ENST00000545856 TAS2R4Q9NYW5 299 aa13.68□□□□□ -0.22
PRPF40A-212ENST00000545856 CD55P08174 381 aa13.67□□□□□ -0.22
PRPF40A-212ENST00000545856 AZGP1P25311 298 aaKnown RBP13.67□□□□□ -0.22
PRPF40A-212ENST00000545856 SSTR2P30874 369 aa13.67□□□□□ -0.22
PRPF40A-212ENST00000545856 CD200P41217 278 aa13.67□□□□□ -0.22
PRPF40A-212ENST00000545856 ATP1B3P54709 279 aa13.67□□□□□ -0.22
PRPF40A-212ENST00000545856 VBP1P61758 197 aa13.67□□□□□ -0.22
PRPF40A-212ENST00000545856 NCS1P62166 190 aa13.67□□□□□ -0.22
PRPF40A-212ENST00000545856 GNG3P63215 75 aa13.67□□□□□ -0.22
PRPF40A-212ENST00000545856 INSL4Q14641 139 aa13.67□□□□□ -0.22
PRPF40A-212ENST00000545856 FAM76BQ5HYJ3 339 aa13.67□□□□□ -0.22
PRPF40A-212ENST00000545856 PLCXD3Q63HM9 321 aa13.67□□□□□ -0.22
PRPF40A-212ENST00000545856 ASPHD2Q6ICH7 369 aa13.67□□□□□ -0.22
PRPF40A-212ENST00000545856 OR8S1Q8NH09 359 aa13.67□□□□□ -0.22
PRPF40A-212ENST00000545856 LILRB1Q8NHL6 650 aaPredicted RBP13.67□□□□□ -0.22
PRPF40A-212ENST00000545856 OR5P3Q8WZ94 311 aa13.67□□□□□ -0.22
PRPF40A-212ENST00000545856 PIGCQ92535 297 aa13.67□□□□□ -0.22
PRPF40A-212ENST00000545856 AP3S1Q92572 193 aa13.67□□□□□ -0.22
PRPF40A-212ENST00000545856 KCTD12Q96CX2 325 aaKnown RBP13.67□□□□□ -0.22
PRPF40A-212ENST00000545856 BORCS8Q96FH0 119 aa13.67□□□□□ -0.22
PRPF40A-212ENST00000545856 NAA50Q9GZZ1 169 aaKnown RBP13.67□□□□□ -0.22
PRPF40A-212ENST00000545856 DCSTAMPQ9H295 470 aa13.67□□□□□ -0.22
PRPF40A-212ENST00000545856 PPIL3Q9H2H8 161 aaKnown RBP13.67□□□□□ -0.22
PRPF40A-212ENST00000545856 TAAR3PQ9P1P4 343 aa13.67□□□□□ -0.22
PRPF40A-212ENST00000545856 GHRLQ9UBU3 117 aa13.67□□□□□ -0.22
PRPF40A-212ENST00000545856 DSCAMO60469 2012 aa13.66□□□□□ -0.22
PRPF40A-212ENST00000545856 TRAV8-7A0A075B6U6 113 aa13.66□□□□□ -0.22
PRPF40A-212ENST00000545856 ZNF850A8MQ14 1090 aa13.66□□□□□ -0.22
PRPF40A-212ENST00000545856 NOTOA8MTQ0 251 aa13.66□□□□□ -0.22
PRPF40A-212ENST00000545856 SDC2P34741 201 aa13.66□□□□□ -0.22
PRPF40A-212ENST00000545856 SOX6P35712 828 aa13.66□□□□□ -0.22
PRPF40A-212ENST00000545856 SERPINB10P48595 397 aa13.66□□□□□ -0.22
PRPF40A-212ENST00000545856 ZNF81P51508 661 aa13.66□□□□□ -0.22
PRPF40A-212ENST00000545856 OR8G1Q15617 311 aa13.66□□□□□ -0.22
PRPF40A-212ENST00000545856 UBE2V2Q15819 145 aa13.66□□□□□ -0.22
PRPF40A-212ENST00000545856 MSMPQ1L6U9 139 aa13.66□□□□□ -0.22
PRPF40A-212ENST00000545856 SWI5Q1ZZU3 235 aa13.66□□□□□ -0.22
PRPF40A-212ENST00000545856 FAM27D1Q5T7N8 215 aa13.66□□□□□ -0.22
PRPF40A-212ENST00000545856 LRRTM1Q86UE6 522 aa13.66□□□□□ -0.22
PRPF40A-212ENST00000545856 ZNF573Q86YE8 665 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms