RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 F2RL2O00254 374 aa12.31□□□□□ -0.44
CLSTN3-216ENST00000545663 RER1O15258 196 aa12.31□□□□□ -0.44
CLSTN3-216ENST00000545663 JTBO76095 146 aa12.31□□□□□ -0.44
CLSTN3-216ENST00000545663 OR7A10O76100 309 aa12.31□□□□□ -0.44
CLSTN3-216ENST00000545663 TNFRSF1BP20333 461 aa12.31□□□□□ -0.44
CLSTN3-216ENST00000545663 THBS3P49746 956 aa12.31□□□□□ -0.44
CLSTN3-216ENST00000545663 ACTR3P61158 418 aa12.31□□□□□ -0.44
CLSTN3-216ENST00000545663 PCK2Q16822 640 aa12.31□□□□□ -0.44
CLSTN3-216ENST00000545663 RSPO1Q2MKA7 263 aaPredicted RBP12.31□□□□□ -0.44
CLSTN3-216ENST00000545663 C18orf65Q6ZTR6 163 aa12.31□□□□□ -0.44
CLSTN3-216ENST00000545663 ACOT11Q8WXI4 607 aaPredicted RBP12.31□□□□□ -0.44
CLSTN3-216ENST00000545663 SLCO4A1Q96BD0 722 aa12.31□□□□□ -0.44
CLSTN3-216ENST00000545663 PRSS27Q9BQR3 290 aa12.31□□□□□ -0.44
CLSTN3-216ENST00000545663 NMNAT1Q9HAN9 279 aaPredicted RBP12.31□□□□□ -0.44
CLSTN3-216ENST00000545663 MED31Q9Y3C7 131 aa12.31□□□□□ -0.44
CLSTN3-216ENST00000545663 A6NLC8 198 aa12.3□□□□□ -0.44
CLSTN3-216ENST00000545663 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.3□□□□□ -0.44
CLSTN3-216ENST00000545663 J3QW42 95 aa12.3□□□□□ -0.44
CLSTN3-216ENST00000545663 TSPAN19P0C672 248 aa12.3□□□□□ -0.44
CLSTN3-216ENST00000545663 ECI1P42126 302 aa12.3□□□□□ -0.44
CLSTN3-216ENST00000545663 TGM4P49221 684 aa12.3□□□□□ -0.44
CLSTN3-216ENST00000545663 ANKDD1AQ495B1 522 aa12.3□□□□□ -0.44
CLSTN3-216ENST00000545663 OVCH2Q7RTZ1 564 aa12.3□□□□□ -0.44
CLSTN3-216ENST00000545663 MKXQ8IYA7 352 aa12.3□□□□□ -0.44
CLSTN3-216ENST00000545663 ADGRG5Q8IZF4 528 aa12.3□□□□□ -0.44
CLSTN3-216ENST00000545663 FAM86B1Q8N7N1 296 aa12.3□□□□□ -0.44
CLSTN3-216ENST00000545663 CANT1Q8WVQ1 401 aa12.3□□□□□ -0.44
CLSTN3-216ENST00000545663 TMEM239Q8WW34 195 aa12.3□□□□□ -0.44
CLSTN3-216ENST00000545663 SPRYD4Q8WW59 207 aaPredicted RBP12.3□□□□□ -0.44
CLSTN3-216ENST00000545663 DHRS1Q96LJ7 313 aa12.3□□□□□ -0.44
CLSTN3-216ENST00000545663 ADAT1Q9BUB4 502 aaKnown RBP12.3□□□□□ -0.44
CLSTN3-216ENST00000545663 REEP1Q9H902 201 aa12.3□□□□□ -0.44
CLSTN3-216ENST00000545663 TMEM5Q9Y2B1 443 aa12.3□□□□□ -0.44
CLSTN3-216ENST00000545663 A0A1W2PQ09 198 aa12.29□□□□□ -0.44
CLSTN3-216ENST00000545663 VGLL3A8MV65 326 aa12.29□□□□□ -0.44
CLSTN3-216ENST00000545663 H0YAE9 185 aa12.29□□□□□ -0.44
CLSTN3-216ENST00000545663 GNGT2O14610 69 aa12.29□□□□□ -0.44
CLSTN3-216ENST00000545663 RRP9O43818 475 aaKnown RBP12.29□□□□□ -0.44
CLSTN3-216ENST00000545663 GADD45GO95257 159 aa12.29□□□□□ -0.44
CLSTN3-216ENST00000545663 MT-ND1P03886 318 aa12.29□□□□□ -0.44
CLSTN3-216ENST00000545663 NR2C1P13056 603 aa12.29□□□□□ -0.44
CLSTN3-216ENST00000545663 JUNBP17275 347 aaPredicted RBP12.29□□□□□ -0.44
CLSTN3-216ENST00000545663 HMGA2P52926 109 aa12.29□□□□□ -0.44
CLSTN3-216ENST00000545663 ERVFRD-1P60508 538 aa12.29□□□□□ -0.44
CLSTN3-216ENST00000545663 RPL27P61353 136 aaKnown RBP12.29□□□□□ -0.44
CLSTN3-216ENST00000545663 MICBQ29980 383 aa12.29□□□□□ -0.44
CLSTN3-216ENST00000545663 OR2T5Q6IEZ7 315 aa12.29□□□□□ -0.44
CLSTN3-216ENST00000545663 KCTD18Q6PI47 426 aaPredicted RBP12.29□□□□□ -0.44
CLSTN3-216ENST00000545663 ZNF730Q6ZMV8 503 aa12.29□□□□□ -0.44
CLSTN3-216ENST00000545663 SLC36A1Q7Z2H8 476 aa12.29□□□□□ -0.44
CLSTN3-216ENST00000545663 NAA40Q86UY6 237 aa12.29□□□□□ -0.44
CLSTN3-216ENST00000545663 C11orf53Q8IXP5 236 aa12.29□□□□□ -0.44
CLSTN3-216ENST00000545663 OR2T29Q8NH02 315 aa12.29□□□□□ -0.44
CLSTN3-216ENST00000545663 UTP4Q969X6 686 aaKnown RBP12.29□□□□□ -0.44
CLSTN3-216ENST00000545663 WACQ9BTA9 647 aa12.29□□□□□ -0.44
CLSTN3-216ENST00000545663 NDEL1Q9GZM8 345 aa12.29□□□□□ -0.44
CLSTN3-216ENST00000545663 ELL3Q9HB65 397 aaPredicted RBP12.29□□□□□ -0.44
CLSTN3-216ENST00000545663 ARMC1Q9NVT9 282 aa12.29□□□□□ -0.44
CLSTN3-216ENST00000545663 AP4S1Q9Y587 144 aa12.29□□□□□ -0.44
CLSTN3-216ENST00000545663 NPIPB13A6NJU9 1138 aa12.28□□□□□ -0.44
CLSTN3-216ENST00000545663 NPIPB4C9JG80 1138 aa12.28□□□□□ -0.44
CLSTN3-216ENST00000545663 FFAR1O14842 300 aa12.28□□□□□ -0.44
CLSTN3-216ENST00000545663 FKBP6O75344 327 aa12.28□□□□□ -0.44
CLSTN3-216ENST00000545663 CST1P01037 141 aa12.28□□□□□ -0.44
CLSTN3-216ENST00000545663 ALDOBP05062 364 aa12.28□□□□□ -0.44
CLSTN3-216ENST00000545663 POU1F1P28069 291 aa12.28□□□□□ -0.44
CLSTN3-216ENST00000545663 RRM2P31350 389 aa12.28□□□□□ -0.44
CLSTN3-216ENST00000545663 YAP1P46937 504 aaKnown RBP12.28□□□□□ -0.44
CLSTN3-216ENST00000545663 SPIBQ01892 262 aa12.28□□□□□ -0.44
CLSTN3-216ENST00000545663 AQP6Q13520 282 aa12.28□□□□□ -0.44
CLSTN3-216ENST00000545663 BLMHQ13867 455 aa12.28□□□□□ -0.44
CLSTN3-216ENST00000545663 LRRC10Q5BKY1 277 aa12.28□□□□□ -0.44
CLSTN3-216ENST00000545663 FGD3Q5JSP0 725 aa12.28□□□□□ -0.44
CLSTN3-216ENST00000545663 MBOAT2Q6ZWT7 520 aa12.28□□□□□ -0.44
CLSTN3-216ENST00000545663 PLPP7Q8NBV4 271 aa12.28□□□□□ -0.44
CLSTN3-216ENST00000545663 OR9Q1Q8NGQ5 310 aa12.28□□□□□ -0.44
CLSTN3-216ENST00000545663 LRRC29Q8WV35 223 aa12.28□□□□□ -0.44
CLSTN3-216ENST00000545663 STMN2Q93045 179 aa12.28□□□□□ -0.44
CLSTN3-216ENST00000545663 DUX3Q96PT4 197 aa12.28□□□□□ -0.44
CLSTN3-216ENST00000545663 EDA2RQ9HAV5 297 aa12.28□□□□□ -0.44
CLSTN3-216ENST00000545663 DNAJB9Q9UBS3 223 aa12.28□□□□□ -0.44
CLSTN3-216ENST00000545663 ABCA13Q86UQ4 5058 aa12.28□□□□□ -0.44
CLSTN3-216ENST00000545663 MUC1P15941 1255 aaPredicted RBP12.27□□□□□ -0.45
CLSTN3-216ENST00000545663 COX7A1P24310 79 aa12.27□□□□□ -0.45
CLSTN3-216ENST00000545663 FASP25445 335 aa12.27□□□□□ -0.45
CLSTN3-216ENST00000545663 SLC9A3P48764 834 aa12.27□□□□□ -0.45
CLSTN3-216ENST00000545663 GMFBP60983 142 aa12.27□□□□□ -0.45
CLSTN3-216ENST00000545663 DGUOKQ16854 277 aa12.27□□□□□ -0.45
CLSTN3-216ENST00000545663 ALG10Q5BKT4 473 aa12.27□□□□□ -0.45
CLSTN3-216ENST00000545663 C8orf86Q6ZUL3 223 aa12.27□□□□□ -0.45
CLSTN3-216ENST00000545663 NKAIN4Q8IVV8 208 aa12.27□□□□□ -0.45
CLSTN3-216ENST00000545663 OR4X2Q8NGF9 303 aa12.27□□□□□ -0.45
CLSTN3-216ENST00000545663 OR5D13Q8NGL4 314 aa12.27□□□□□ -0.45
CLSTN3-216ENST00000545663 LIPHQ8WWY8 451 aa12.27□□□□□ -0.45
CLSTN3-216ENST00000545663 SGTBQ96EQ0 304 aa12.27□□□□□ -0.45
CLSTN3-216ENST00000545663 ERICH4A6NGS2 130 aa12.26□□□□□ -0.45
CLSTN3-216ENST00000545663 CD300LBA8K4G0 201 aa12.26□□□□□ -0.45
CLSTN3-216ENST00000545663 J3KTA2 159 aa12.26□□□□□ -0.45
CLSTN3-216ENST00000545663 TNFRSF11BO00300 401 aa12.26□□□□□ -0.45
CLSTN3-216ENST00000545663 GMDSO60547 372 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms