RNA–Protein interactions for RNA: ENST00000542663.1

CLSTN3-214, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-214ENST00000542663 SEMG1P04279 462 aa14.45□□□□□ -0.1
CLSTN3-214ENST00000542663 ACAA1P09110 424 aaPredicted RBP14.45□□□□□ -0.1
CLSTN3-214ENST00000542663 COX4I1P13073 169 aa14.45□□□□□ -0.1
CLSTN3-214ENST00000542663 NDUFB7P17568 137 aa14.45□□□□□ -0.1
CLSTN3-214ENST00000542663 CX3CR1P49238 355 aa14.45□□□□□ -0.1
CLSTN3-214ENST00000542663 GSK3AP49840 483 aa14.45□□□□□ -0.1
CLSTN3-214ENST00000542663 ENTPD1P49961 510 aa14.45□□□□□ -0.1
CLSTN3-214ENST00000542663 KRT72Q14CN4 511 aa14.45□□□□□ -0.1
CLSTN3-214ENST00000542663 AANATQ16613 207 aa14.45□□□□□ -0.1
CLSTN3-214ENST00000542663 TIGD6Q17RP2 521 aa14.45□□□□□ -0.1
CLSTN3-214ENST00000542663 ZNF511Q8NB15 262 aa14.45□□□□□ -0.1
CLSTN3-214ENST00000542663 OR4S1Q8NGB4 309 aa14.45□□□□□ -0.1
CLSTN3-214ENST00000542663 OR2T4Q8NH00 348 aa14.45□□□□□ -0.1
CLSTN3-214ENST00000542663 RPL3LQ92901 407 aaKnown RBP14.45□□□□□ -0.1
CLSTN3-214ENST00000542663 MED30Q96HR3 178 aa14.45□□□□□ -0.1
CLSTN3-214ENST00000542663 NPFFR1Q9GZQ6 430 aa14.45□□□□□ -0.1
CLSTN3-214ENST00000542663 FGF23Q9GZV9 251 aaPredicted RBP14.45□□□□□ -0.1
CLSTN3-214ENST00000542663 EGLN3Q9H6Z9 239 aa14.45□□□□□ -0.1
CLSTN3-214ENST00000542663 RAB18Q9NP72 206 aa14.45□□□□□ -0.1
CLSTN3-214ENST00000542663 ZNF319Q9P2F9 582 aa14.45□□□□□ -0.1
CLSTN3-214ENST00000542663 ZNF593O00488 134 aaPredicted RBP14.44□□□□□ -0.1
CLSTN3-214ENST00000542663 AKR7A2O43488 359 aa14.44□□□□□ -0.1
CLSTN3-214ENST00000542663 ANGPTL7O43827 346 aa14.44□□□□□ -0.1
CLSTN3-214ENST00000542663 ANXA2P07355 339 aaKnown RBP14.44□□□□□ -0.1
CLSTN3-214ENST00000542663 BMXP51813 675 aa14.44□□□□□ -0.1
CLSTN3-214ENST00000542663 SPIBQ01892 262 aa14.44□□□□□ -0.1
CLSTN3-214ENST00000542663 EMX1Q04741 257 aaPredicted RBP14.44□□□□□ -0.1
CLSTN3-214ENST00000542663 TSPAN31Q12999 210 aa14.44□□□□□ -0.1
CLSTN3-214ENST00000542663 GLYATQ6IB77 296 aa14.44□□□□□ -0.1
CLSTN3-214ENST00000542663 C11orf87Q6NUJ2 197 aa14.44□□□□□ -0.1
CLSTN3-214ENST00000542663 R3HDM4Q96D70 268 aa14.44□□□□□ -0.1
CLSTN3-214ENST00000542663 PAPOLGQ9BWT3 736 aaKnown RBP14.44□□□□□ -0.1
CLSTN3-214ENST00000542663 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.44□□□□□ -0.1
CLSTN3-214ENST00000542663 ABCD2Q9UBJ2 740 aa14.44□□□□□ -0.1
CLSTN3-214ENST00000542663 CD300AQ9UGN4 299 aa14.44□□□□□ -0.1
CLSTN3-214ENST00000542663 SAMD4AQ9UPU9 718 aaKnown RBP14.44□□□□□ -0.1
CLSTN3-214ENST00000542663 IGKV1D-17A0A075B6S4 117 aa14.43□□□□□ -0.1
CLSTN3-214ENST00000542663 DHRS12A0PJE2 317 aa14.43□□□□□ -0.1
CLSTN3-214ENST00000542663 H0YAE9 185 aa14.43□□□□□ -0.1
CLSTN3-214ENST00000542663 GYPBP06028 91 aa14.43□□□□□ -0.1
CLSTN3-214ENST00000542663 GRB2P62993 217 aaKnown RBP14.43□□□□□ -0.1
CLSTN3-214ENST00000542663 BLMHQ13867 455 aa14.43□□□□□ -0.1
CLSTN3-214ENST00000542663 TEX30Q5JUR7 227 aa14.43□□□□□ -0.1
CLSTN3-214ENST00000542663 ZBTB37Q5TC79 503 aa14.43□□□□□ -0.1
CLSTN3-214ENST00000542663 LIAT1Q6ZQX7 453 aa14.43□□□□□ -0.1
CLSTN3-214ENST00000542663 NDUFA11Q86Y39 141 aa14.43□□□□□ -0.1
CLSTN3-214ENST00000542663 Q8N2B8 174 aa14.43□□□□□ -0.1
CLSTN3-214ENST00000542663 SLC37A3Q8NCC5 494 aa14.43□□□□□ -0.1
CLSTN3-214ENST00000542663 ZNRF1Q8ND25 227 aa14.43□□□□□ -0.1
CLSTN3-214ENST00000542663 OR5D13Q8NGL4 314 aa14.43□□□□□ -0.1
CLSTN3-214ENST00000542663 CITED2Q99967 270 aaPredicted RBP14.43□□□□□ -0.1
CLSTN3-214ENST00000542663 MICU1Q9BPX6 476 aa14.43□□□□□ -0.1
CLSTN3-214ENST00000542663 V9GYQ6 96 aa14.43□□□□□ -0.1
CLSTN3-214ENST00000542663 OR2AT4A6NND4 320 aa14.42□□□□□ -0.1
CLSTN3-214ENST00000542663 MPIG6BO95866 241 aa14.42□□□□□ -0.1
CLSTN3-214ENST00000542663 VSIG8P0DPA2 414 aa14.42□□□□□ -0.1
CLSTN3-214ENST00000542663 ACKR3P25106 362 aa14.42□□□□□ -0.1
CLSTN3-214ENST00000542663 POU1F1P28069 291 aa14.42□□□□□ -0.1
CLSTN3-214ENST00000542663 FMO3P31513 532 aa14.42□□□□□ -0.1
CLSTN3-214ENST00000542663 DCTDP32321 178 aa14.42□□□□□ -0.1
CLSTN3-214ENST00000542663 GNALP38405 381 aa14.42□□□□□ -0.1
CLSTN3-214ENST00000542663 SMIM11AP58511 58 aa14.42□□□□□ -0.1
CLSTN3-214ENST00000542663 IL5RAQ01344 420 aa14.42□□□□□ -0.1
CLSTN3-214ENST00000542663 GFOD2Q3B7J2 385 aa14.42□□□□□ -0.1
CLSTN3-214ENST00000542663 FAM76BQ5HYJ3 339 aa14.42□□□□□ -0.1
CLSTN3-214ENST00000542663 HACD2Q6Y1H2 254 aa14.42□□□□□ -0.1
CLSTN3-214ENST00000542663 FAM57BQ71RH2 274 aa14.42□□□□□ -0.1
CLSTN3-214ENST00000542663 MKXQ8IYA7 352 aa14.42□□□□□ -0.1
CLSTN3-214ENST00000542663 C11orf42Q8N5U0 333 aa14.42□□□□□ -0.1
CLSTN3-214ENST00000542663 CSNK2A3Q8NEV1 391 aa14.42□□□□□ -0.1
CLSTN3-214ENST00000542663 OR4F17Q8NGA8 305 aa14.42□□□□□ -0.1
CLSTN3-214ENST00000542663 OR8D4Q8NGM9 314 aa14.42□□□□□ -0.1
CLSTN3-214ENST00000542663 GNPDA2Q8TDQ7 276 aa14.42□□□□□ -0.1
CLSTN3-214ENST00000542663 OR5P3Q8WZ94 311 aa14.42□□□□□ -0.1
CLSTN3-214ENST00000542663 OR4F4Q96R69 305 aa14.42□□□□□ -0.1
CLSTN3-214ENST00000542663 NKX3-1Q99801 234 aaPredicted RBP14.42□□□□□ -0.1
CLSTN3-214ENST00000542663 RTL8AQ9BWD3 113 aa14.42□□□□□ -0.1
CLSTN3-214ENST00000542663 NMNAT2Q9BZQ4 307 aa14.42□□□□□ -0.1
CLSTN3-214ENST00000542663 NLKQ9UBE8 527 aa14.42□□□□□ -0.1
CLSTN3-214ENST00000542663 ZNF222Q9UK12 451 aa14.42□□□□□ -0.1
CLSTN3-214ENST00000542663 TMEM210A6NLX4 147 aa14.41□□□□□ -0.1
CLSTN3-214ENST00000542663 ANXA2P2A6NMY6 339 aa14.41□□□□□ -0.1
CLSTN3-214ENST00000542663 K7EIL1 84 aa14.41□□□□□ -0.1
CLSTN3-214ENST00000542663 CLUP10909 449 aa14.41□□□□□ -0.1
CLSTN3-214ENST00000542663 SLC15A1P46059 708 aa14.41□□□□□ -0.1
CLSTN3-214ENST00000542663 ZNF121P58317 390 aaPredicted RBP14.41□□□□□ -0.1
CLSTN3-214ENST00000542663 PRDX4Q13162 271 aa14.41□□□□□ -0.1
CLSTN3-214ENST00000542663 CCBE1Q6UXH8 406 aaPredicted RBP14.41□□□□□ -0.1
CLSTN3-214ENST00000542663 FAM185AQ8N0U4 392 aa14.41□□□□□ -0.1
CLSTN3-214ENST00000542663 DYNAPQ8N1N2 210 aa14.41□□□□□ -0.1
CLSTN3-214ENST00000542663 HPSE2Q8WWQ2 592 aa14.41□□□□□ -0.1
CLSTN3-214ENST00000542663 AMELYQ99218 206 aa14.41□□□□□ -0.1
CLSTN3-214ENST00000542663 EFCAB1Q9HAE3 211 aa14.41□□□□□ -0.1
CLSTN3-214ENST00000542663 C19orf12Q9NSK7 152 aa14.41□□□□□ -0.1
CLSTN3-214ENST00000542663 DNAJC27Q9NZQ0 273 aa14.41□□□□□ -0.1
CLSTN3-214ENST00000542663 MPC1Q9Y5U8 109 aa14.41□□□□□ -0.1
CLSTN3-214ENST00000542663 CDH10Q9Y6N8 788 aa14.41□□□□□ -0.1
CLSTN3-214ENST00000542663 TENM3Q9P273 2699 aa14.4□□□□□ -0.1
CLSTN3-214ENST00000542663 TRBV23-1A0A0A0MS06 115 aa14.4□□□□□ -0.1
CLSTN3-214ENST00000542663 ZNF850A8MQ14 1090 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms