RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 CD47Q08722 323 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 ITPR2Q14571 2701 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 ZNF846Q147U1 533 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 HIST3H3Q16695 136 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 TBC1D28Q2M2D7 210 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 TRIM16LQ309B1 348 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 FAM98BQ52LJ0 330 aaKnown RBP4.59□□□□□ -1.67
CPSF7-220ENST00000541963 FGD3Q5JSP0 725 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 C10orf128Q5T292 105 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 ARMC4Q5T2S8 1044 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 PODNL1Q6PEZ8 512 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 TBPL2Q6SJ96 375 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 RAI1Q7Z5J4 1906 aaPredicted RBP4.59□□□□□ -1.67
CPSF7-220ENST00000541963 MDP1Q86V88 176 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 DHFR2Q86XF0 187 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 SKA3Q8IX90 412 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 C1orf174Q8IYL3 243 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 SYT14Q8NB59 555 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 NOXO1Q8NFA2 376 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 OR52J3Q8NH60 311 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 MOSPD2Q8NHP6 518 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 GRPEL2Q8TAA5 225 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 FBXO17Q96EF6 278 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 MED30Q96HR3 178 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 TNFRSF13CQ96RJ3 184 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 WACQ9BTA9 647 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 CACNG6Q9BXT2 260 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 MRPL13Q9BYD1 178 aaKnown RBP4.59□□□□□ -1.67
CPSF7-220ENST00000541963 KRTAP4-9Q9BYQ8 210 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 TRIM15Q9C019 465 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 RAB1BQ9H0U4 201 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 ZNF442Q9H7R0 627 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 SIAEQ9HAT2 523 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 CCNB1IP1Q9NPC3 277 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 IL1RAPQ9NPH3 570 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 CA10Q9NS85 328 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 ARMC1Q9NVT9 282 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 TMEM38BQ9NVV0 291 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 B3GNT2Q9NY97 397 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 ACTR3BQ9P1U1 418 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 EIF3KQ9UBQ5 218 aaKnown RBP4.59□□□□□ -1.67
CPSF7-220ENST00000541963 FKBP7Q9Y680 259 aa4.59□□□□□ -1.67
CPSF7-220ENST00000541963 DCHS2Q6V1P9 2916 aa4.59□□□□□ -1.68
CPSF7-220ENST00000541963 PDZD2O15018 2839 aa4.59□□□□□ -1.68
CPSF7-220ENST00000541963 ANKHD1Q8IWZ3 2542 aaKnown RBP4.58□□□□□ -1.68
CPSF7-220ENST00000541963 PRRC2AP48634 2157 aaKnown RBP4.58□□□□□ -1.68
CPSF7-220ENST00000541963 CSMD2Q7Z408 3487 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 TRAV27A0A087WT01 109 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 IGHV2OR16-5A0A0B4J2B6 119 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 FAM172BPA6NC97 362 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 C15orf62A8K5M9 175 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 C12orf71A8MTZ7 269 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 H7C417 338 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 J3QR06 171 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 IMPA2O14732 288 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 ARPC2O15144 300 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 SSX4O60224 188 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 OR10H3O60404 316 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 OR4A8P0C604 315 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 FCGR1AP12314 374 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 ZNF14P17017 642 aaPredicted RBP4.58□□□□□ -1.68
CPSF7-220ENST00000541963 DCKP27707 260 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 APLNRP35414 380 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 GLRXP35754 106 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 GPR4P46093 362 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 GSSP48637 474 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 EVX1P49640 407 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 EIF2B2P49770 351 aaKnown RBP4.58□□□□□ -1.68
CPSF7-220ENST00000541963 ZNF133P52736 654 aaPredicted RBP4.58□□□□□ -1.68
CPSF7-220ENST00000541963 EFNA4P52798 201 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 AQP4P55087 323 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 CD81P60033 236 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 ERVK-25P63136 954 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 VLDLRP98155 873 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 MYBPC1Q00872 1141 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 HSF2Q03933 536 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 SPOCK1Q08629 439 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 TRAP1Q12931 704 aaKnown RBP4.58□□□□□ -1.68
CPSF7-220ENST00000541963 SGCAQ16586 387 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 FAM27BQ5VT28 67 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 AWAT2Q6E213 333 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 RPL13AP3Q6NVV1 102 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 DNM1P34Q6PK57 102 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 SLC25A47Q6Q0C1 308 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 ARL9Q6T311 187 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 CLEC2AQ6UVW9 174 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 B3GLCTQ6Y288 498 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 DPY19L2P2Q6ZN68 376 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 ZDHHC21Q8IVQ6 265 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 LRRC18Q8N456 261 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 ARIH2OSQ8N7S6 290 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 ZNF540Q8NDQ6 660 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 OR2AK2Q8NG84 335 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 OR4K5Q8NGD3 323 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 ANGPTL6Q8NI99 470 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 SLC7A13Q8TCU3 470 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 GNPDA2Q8TDQ7 276 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 RAB2BQ8WUD1 216 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 NSMAFQ92636 917 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 DUS3LQ96G46 650 aaKnown RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms