RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 CST4P01036 141 aa7.96□□□□□ -1.14
DDX55-208ENST00000541259 CD8AP01732 235 aa7.96□□□□□ -1.14
DDX55-208ENST00000541259 SELEP16581 610 aa7.96□□□□□ -1.14
DDX55-208ENST00000541259 ZNF12P17014 697 aa7.96□□□□□ -1.14
DDX55-208ENST00000541259 IGFBP3P17936 291 aaPredicted RBP7.96□□□□□ -1.14
DDX55-208ENST00000541259 CA6P23280 308 aa7.96□□□□□ -1.14
DDX55-208ENST00000541259 CALRP27797 417 aaKnown RBP7.96□□□□□ -1.14
DDX55-208ENST00000541259 FGF9P31371 208 aaPredicted RBP7.96□□□□□ -1.14
DDX55-208ENST00000541259 TTKP33981 857 aa7.96□□□□□ -1.14
DDX55-208ENST00000541259 DDOSTP39656 456 aa7.96□□□□□ -1.14
DDX55-208ENST00000541259 ALDH3B1P43353 468 aa7.96□□□□□ -1.14
DDX55-208ENST00000541259 MMP15P51511 669 aa7.96□□□□□ -1.14
DDX55-208ENST00000541259 VBP1P61758 197 aa7.96□□□□□ -1.14
DDX55-208ENST00000541259 NCS1P62166 190 aa7.96□□□□□ -1.14
DDX55-208ENST00000541259 PRDX4Q13162 271 aa7.96□□□□□ -1.14
DDX55-208ENST00000541259 UBE2V2Q15819 145 aa7.96□□□□□ -1.14
DDX55-208ENST00000541259 CTF1Q16619 201 aa7.96□□□□□ -1.14
DDX55-208ENST00000541259 CEP78Q5JTW2 689 aa7.96□□□□□ -1.14
DDX55-208ENST00000541259 FOXB2Q5VYV0 432 aa7.96□□□□□ -1.14
DDX55-208ENST00000541259 TMEM42Q69YG0 159 aa7.96□□□□□ -1.14
DDX55-208ENST00000541259 MOB3CQ70IA8 216 aa7.96□□□□□ -1.14
DDX55-208ENST00000541259 KRT74Q7RTS7 529 aa7.96□□□□□ -1.14
DDX55-208ENST00000541259 SERPINA12Q8IW75 414 aa7.96□□□□□ -1.14
DDX55-208ENST00000541259 ZCCHC24Q8N2G6 241 aaKnown RBP7.96□□□□□ -1.14
DDX55-208ENST00000541259 CCDC54Q8NEL0 328 aa7.96□□□□□ -1.14
DDX55-208ENST00000541259 CSNK2A3Q8NEV1 391 aa7.96□□□□□ -1.14
DDX55-208ENST00000541259 OR8G5Q8NG78 346 aa7.96□□□□□ -1.14
DDX55-208ENST00000541259 OR51A2Q8NGJ7 313 aa7.96□□□□□ -1.14
DDX55-208ENST00000541259 UBASH3BQ8TF42 649 aa7.96□□□□□ -1.14
DDX55-208ENST00000541259 NPRL2Q8WTW4 380 aa7.96□□□□□ -1.14
DDX55-208ENST00000541259 FBXW5Q969U6 566 aa7.96□□□□□ -1.14
DDX55-208ENST00000541259 SLC30A2Q9BRI3 323 aa7.96□□□□□ -1.14
DDX55-208ENST00000541259 FGF23Q9GZV9 251 aaPredicted RBP7.96□□□□□ -1.14
DDX55-208ENST00000541259 RBM38Q9H0Z9 239 aaKnown RBP7.96□□□□□ -1.14
DDX55-208ENST00000541259 ZCCHC4Q9H5U6 513 aa7.96□□□□□ -1.14
DDX55-208ENST00000541259 UBTD1Q9HAC8 227 aa7.96□□□□□ -1.14
DDX55-208ENST00000541259 PLEKHA1Q9HB21 404 aa7.96□□□□□ -1.14
DDX55-208ENST00000541259 IGKV1-9A0A0C4DH69 117 aa7.95□□□□□ -1.14
DDX55-208ENST00000541259 ZSCAN5BA6NJL1 495 aa7.95□□□□□ -1.14
DDX55-208ENST00000541259 ANKRD30BLA7E2S9 258 aa7.95□□□□□ -1.14
DDX55-208ENST00000541259 VSTM5A8MXK1 200 aa7.95□□□□□ -1.14
DDX55-208ENST00000541259 MLNRO43193 412 aa7.95□□□□□ -1.14
DDX55-208ENST00000541259 WIPF1O43516 503 aa7.95□□□□□ -1.14
DDX55-208ENST00000541259 GABARAPO95166 117 aa7.95□□□□□ -1.14
DDX55-208ENST00000541259 GOSR1O95249 250 aa7.95□□□□□ -1.14
DDX55-208ENST00000541259 NRASP01111 189 aa7.95□□□□□ -1.14
DDX55-208ENST00000541259 MAS1P04201 325 aa7.95□□□□□ -1.14
DDX55-208ENST00000541259 CD2P06729 351 aa7.95□□□□□ -1.14
DDX55-208ENST00000541259 SOD3P08294 240 aa7.95□□□□□ -1.14
DDX55-208ENST00000541259 CLEC2LP0C7M8 214 aa7.95□□□□□ -1.14
DDX55-208ENST00000541259 DANCRP0C864 163 aa7.95□□□□□ -1.14
DDX55-208ENST00000541259 NAT2P11245 290 aa7.95□□□□□ -1.14
DDX55-208ENST00000541259 ADRA2CP18825 462 aa7.95□□□□□ -1.14
DDX55-208ENST00000541259 ATF1P18846 271 aa7.95□□□□□ -1.14
DDX55-208ENST00000541259 SRMP19623 302 aa7.95□□□□□ -1.14
DDX55-208ENST00000541259 GALP22466 123 aa7.95□□□□□ -1.14
DDX55-208ENST00000541259 TLE4Q04727 773 aa7.95□□□□□ -1.14
DDX55-208ENST00000541259 EFNB3Q15768 340 aa7.95□□□□□ -1.14
DDX55-208ENST00000541259 NKPD1Q17RQ9 610 aa7.95□□□□□ -1.14
DDX55-208ENST00000541259 HSD17B12Q53GQ0 312 aa7.95□□□□□ -1.14
DDX55-208ENST00000541259 SPRNQ5BIV9 151 aa7.95□□□□□ -1.14
DDX55-208ENST00000541259 CLVS2Q5SYC1 327 aa7.95□□□□□ -1.14
DDX55-208ENST00000541259 ZBTB37Q5TC79 503 aa7.95□□□□□ -1.14
DDX55-208ENST00000541259 ZNF529Q6P280 563 aa7.95□□□□□ -1.14
DDX55-208ENST00000541259 LRRTM1Q86UE6 522 aa7.95□□□□□ -1.14
DDX55-208ENST00000541259 FBXL14Q8N1E6 418 aa7.95□□□□□ -1.14
DDX55-208ENST00000541259 MUC15Q8N387 334 aa7.95□□□□□ -1.14
DDX55-208ENST00000541259 OR1M1Q8NGA1 313 aa7.95□□□□□ -1.14
DDX55-208ENST00000541259 OR5D14Q8NGL3 314 aa7.95□□□□□ -1.14
DDX55-208ENST00000541259 OR13C9Q8NGT0 318 aa7.95□□□□□ -1.14
DDX55-208ENST00000541259 TRMT10AQ8TBZ6 339 aaKnown RBP7.95□□□□□ -1.14
DDX55-208ENST00000541259 HPSE2Q8WWQ2 592 aa7.95□□□□□ -1.14
DDX55-208ENST00000541259 PIGTQ969N2 578 aa7.95□□□□□ -1.14
DDX55-208ENST00000541259 GFI1Q99684 422 aa7.95□□□□□ -1.14
DDX55-208ENST00000541259 NKX3-1Q99801 234 aaPredicted RBP7.95□□□□□ -1.14
DDX55-208ENST00000541259 PAPOLGQ9BWT3 736 aaKnown RBP7.95□□□□□ -1.14
DDX55-208ENST00000541259 CHST5Q9GZS9 411 aa7.95□□□□□ -1.14
DDX55-208ENST00000541259 CLEC4MQ9H2X3 399 aaPredicted RBP7.95□□□□□ -1.14
DDX55-208ENST00000541259 PLEKHF2Q9H8W4 249 aa7.95□□□□□ -1.14
DDX55-208ENST00000541259 TMEM100Q9NV29 134 aa7.95□□□□□ -1.14
DDX55-208ENST00000541259 MRPL15Q9P015 296 aaKnown RBP7.95□□□□□ -1.14
DDX55-208ENST00000541259 TANC2Q9HCD6 1990 aa7.95□□□□□ -1.14
DDX55-208ENST00000541259 IGHV3-64DA0A0J9YX35 117 aa7.94□□□□□ -1.14
DDX55-208ENST00000541259 SMIM30A4D0T7 59 aa7.94□□□□□ -1.14
DDX55-208ENST00000541259 CCDC160A6NGH7 325 aa7.94□□□□□ -1.14
DDX55-208ENST00000541259 B9A039 149 aa7.94□□□□□ -1.14
DDX55-208ENST00000541259 F5H5P2 479 aa7.94□□□□□ -1.14
DDX55-208ENST00000541259 SPRY3O43610 288 aa7.94□□□□□ -1.14
DDX55-208ENST00000541259 SULT1B1O43704 296 aa7.94□□□□□ -1.14
DDX55-208ENST00000541259 NCR1O76036 304 aa7.94□□□□□ -1.14
DDX55-208ENST00000541259 CDRT1O95170 752 aa7.94□□□□□ -1.14
DDX55-208ENST00000541259 RAF1P04049 648 aa7.94□□□□□ -1.14
DDX55-208ENST00000541259 FSTP19883 344 aa7.94□□□□□ -1.14
DDX55-208ENST00000541259 MAPK3P27361 379 aaPredicted RBP7.94□□□□□ -1.14
DDX55-208ENST00000541259 SDC2P34741 201 aa7.94□□□□□ -1.14
DDX55-208ENST00000541259 THBS2P35442 1172 aa7.94□□□□□ -1.14
DDX55-208ENST00000541259 RBMXP38159 391 aaKnown RBP7.94□□□□□ -1.14
DDX55-208ENST00000541259 EVX1P49640 407 aa7.94□□□□□ -1.14
DDX55-208ENST00000541259 TMBIM6P55061 237 aa7.94□□□□□ -1.14
DDX55-208ENST00000541259 SELENOVP59797 346 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms