RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 CCL13Q99616 98 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 COQ7Q99807 217 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 PRSS27Q9BQR3 290 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 AIFM2Q9BRQ8 373 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 PAIP1Q9H074 479 aaKnown RBP3.68□□□□□ -1.82
SNHG1-214ENST00000540865 TMEM38AQ9H6F2 299 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 WDR55Q9H6Y2 383 aaPredicted RBP3.68□□□□□ -1.82
SNHG1-214ENST00000540865 WDR76Q9H967 626 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 RNPEPL1Q9HAU8 725 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.68□□□□□ -1.82
SNHG1-214ENST00000540865 SLC17A7Q9P2U7 560 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 DUX4Q9UBX2 424 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 SLC7A7Q9UM01 511 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 CORO2BQ9UQ03 480 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 TCF19Q9Y242 345 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 ANGPT4Q9Y264 503 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 RAP2CQ9Y3L5 183 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 CAPN7Q9Y6W3 813 aa3.68□□□□□ -1.82
SNHG1-214ENST00000540865 DNAH11Q96DT5 4516 aa3.67□□□□□ -1.82
SNHG1-214ENST00000540865 IGHV3OR15-7A0A075B7D8 119 aa3.67□□□□□ -1.82
SNHG1-214ENST00000540865 A0A087WWL8 130 aa3.67□□□□□ -1.82
SNHG1-214ENST00000540865 hCG_1807616A0A1W2PRN6 198 aa3.67□□□□□ -1.82
SNHG1-214ENST00000540865 RBMY1BA6NDE4 496 aaKnown RBP3.67□□□□□ -1.82
SNHG1-214ENST00000540865 RBMY1EA6NEQ0 496 aaKnown RBP3.67□□□□□ -1.82
SNHG1-214ENST00000540865 FAM90A8PA6NJQ4 464 aa3.67□□□□□ -1.82
SNHG1-214ENST00000540865 A6NLC8 198 aa3.67□□□□□ -1.82
SNHG1-214ENST00000540865 SMIM23A6NLE4 172 aa3.67□□□□□ -1.82
SNHG1-214ENST00000540865 CD300LBA8K4G0 201 aa3.67□□□□□ -1.82
SNHG1-214ENST00000540865 H0YAE9 185 aa3.67□□□□□ -1.82
SNHG1-214ENST00000540865 ITM2AO43736 263 aa3.67□□□□□ -1.82
SNHG1-214ENST00000540865 AHCYL1O43865 530 aa3.67□□□□□ -1.82
SNHG1-214ENST00000540865 JTBO76095 146 aa3.67□□□□□ -1.82
SNHG1-214ENST00000540865 GLCEO94923 617 aa3.67□□□□□ -1.82
SNHG1-214ENST00000540865 SHBGP04278 402 aa3.67□□□□□ -1.82
SNHG1-214ENST00000540865 CCDC159P0C7I6 412 aa3.67□□□□□ -1.82
SNHG1-214ENST00000540865 RBMY1DP0C7P1 496 aaKnown RBP3.67□□□□□ -1.82
SNHG1-214ENST00000540865 IDO1P14902 403 aa3.67□□□□□ -1.82
SNHG1-214ENST00000540865 HOXB9P17482 250 aaPredicted RBP3.67□□□□□ -1.82
SNHG1-214ENST00000540865 CA6P23280 308 aa3.67□□□□□ -1.82
SNHG1-214ENST00000540865 PPIBP23284 216 aaKnown RBP3.67□□□□□ -1.82
SNHG1-214ENST00000540865 GRK5P34947 590 aa3.67□□□□□ -1.82
SNHG1-214ENST00000540865 RBM34P42696 430 aaKnown RBP3.67□□□□□ -1.82
SNHG1-214ENST00000540865 ABCE1P61221 599 aaKnown RBP3.67□□□□□ -1.82
SNHG1-214ENST00000540865 RPS16P62249 146 aaKnown RBP3.67□□□□□ -1.82
SNHG1-214ENST00000540865 LSM6P62312 80 aaKnown RBP3.67□□□□□ -1.82
SNHG1-214ENST00000540865 BLCAPP62952 87 aa3.67□□□□□ -1.82
SNHG1-214ENST00000540865 HIST1H3AP68431 136 aa3.67□□□□□ -1.82
SNHG1-214ENST00000540865 ECH1Q13011 328 aa3.67□□□□□ -1.82
SNHG1-214ENST00000540865 SCARB2Q14108 478 aa3.67□□□□□ -1.82
SNHG1-214ENST00000540865 PCK2Q16822 640 aa3.67□□□□□ -1.82
SNHG1-214ENST00000540865 DUSP7Q16829 419 aa3.67□□□□□ -1.82
SNHG1-214ENST00000540865 ALG10Q5BKT4 473 aa3.67□□□□□ -1.82
SNHG1-214ENST00000540865 HIST2H3PS2Q5TEC6 136 aa3.67□□□□□ -1.82
SNHG1-214ENST00000540865 ADAMTSL5Q6ZMM2 481 aa3.67□□□□□ -1.82
SNHG1-214ENST00000540865 Q6ZNX1 250 aa3.67□□□□□ -1.82
SNHG1-214ENST00000540865 ZNF826PQ6ZT77 177 aa3.67□□□□□ -1.82
SNHG1-214ENST00000540865 HIST2H3AQ71DI3 136 aa3.67□□□□□ -1.82
SNHG1-214ENST00000540865 PGAP1Q75T13 922 aa3.67□□□□□ -1.82
SNHG1-214ENST00000540865 LNX2Q8N448 690 aa3.67□□□□□ -1.82
SNHG1-214ENST00000540865 FAM216BQ8N7L0 139 aa3.67□□□□□ -1.82
SNHG1-214ENST00000540865 SMYD1Q8NB12 490 aa3.67□□□□□ -1.82
SNHG1-214ENST00000540865 OR9Q1Q8NGQ5 310 aa3.67□□□□□ -1.82
SNHG1-214ENST00000540865 PFN4Q8NHR9 129 aa3.67□□□□□ -1.82
SNHG1-214ENST00000540865 RPS4Y2Q8TD47 263 aa3.67□□□□□ -1.82
SNHG1-214ENST00000540865 LINC00476Q8WZB0 136 aa3.67□□□□□ -1.82
SNHG1-214ENST00000540865 H1FXQ92522 213 aaKnown RBP3.67□□□□□ -1.82
SNHG1-214ENST00000540865 GTF2H4Q92759 462 aa3.67□□□□□ -1.82
SNHG1-214ENST00000540865 SLCO4A1Q96BD0 722 aa3.67□□□□□ -1.82
SNHG1-214ENST00000540865 DUS3LQ96G46 650 aaKnown RBP3.67□□□□□ -1.82
SNHG1-214ENST00000540865 ADAT1Q9BUB4 502 aaKnown RBP3.67□□□□□ -1.82
SNHG1-214ENST00000540865 HDHD2Q9H0R4 259 aa3.67□□□□□ -1.82
SNHG1-214ENST00000540865 DNTTIP1Q9H147 329 aa3.67□□□□□ -1.82
SNHG1-214ENST00000540865 HEXA-AS1Q9H8Q6 139 aa3.67□□□□□ -1.82
SNHG1-214ENST00000540865 GRPEL1Q9HAV7 217 aa3.67□□□□□ -1.82
SNHG1-214ENST00000540865 ABCB10Q9NRK6 738 aa3.67□□□□□ -1.82
SNHG1-214ENST00000540865 MRPL15Q9P015 296 aaKnown RBP3.67□□□□□ -1.82
SNHG1-214ENST00000540865 HAO1Q9UJM8 370 aa3.67□□□□□ -1.82
SNHG1-214ENST00000540865 NDUFAF1Q9Y375 327 aa3.67□□□□□ -1.82
SNHG1-214ENST00000540865 GMEB1Q9Y692 573 aa3.67□□□□□ -1.82
SNHG1-214ENST00000540865 TEX13CA0A0J9YWL9 993 aa3.66□□□□□ -1.82
SNHG1-214ENST00000540865 A0A1W2PQ09 198 aa3.66□□□□□ -1.82
SNHG1-214ENST00000540865 HTR3EA5X5Y0 456 aa3.66□□□□□ -1.82
SNHG1-214ENST00000540865 SDHDO14521 159 aa3.66□□□□□ -1.82
SNHG1-214ENST00000540865 ACOT8O14734 319 aa3.66□□□□□ -1.82
SNHG1-214ENST00000540865 RER1O15258 196 aa3.66□□□□□ -1.82
SNHG1-214ENST00000540865 TRIAP1O43715 76 aa3.66□□□□□ -1.82
SNHG1-214ENST00000540865 SPAG7O75391 227 aa3.66□□□□□ -1.82
SNHG1-214ENST00000540865 AZGP1P25311 298 aaKnown RBP3.66□□□□□ -1.82
SNHG1-214ENST00000540865 PAX6P26367 422 aa3.66□□□□□ -1.82
SNHG1-214ENST00000540865 POU1F1P28069 291 aa3.66□□□□□ -1.82
SNHG1-214ENST00000540865 AQP1P29972 269 aa3.66□□□□□ -1.82
SNHG1-214ENST00000540865 SLC6A1P30531 599 aa3.66□□□□□ -1.82
SNHG1-214ENST00000540865 MYCNOSP40205 109 aa3.66□□□□□ -1.82
SNHG1-214ENST00000540865 NAA10P41227 235 aaPredicted RBP3.66□□□□□ -1.82
SNHG1-214ENST00000540865 THBS3P49746 956 aa3.66□□□□□ -1.82
SNHG1-214ENST00000540865 DYNLT3P51808 116 aa3.66□□□□□ -1.82
SNHG1-214ENST00000540865 CAV3P56539 151 aa3.66□□□□□ -1.82
SNHG1-214ENST00000540865 ELF3P78545 371 aaPredicted RBP3.66□□□□□ -1.82
SNHG1-214ENST00000540865 IL5RAQ01344 420 aa3.66□□□□□ -1.82
SNHG1-214ENST00000540865 SPIBQ01892 262 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms