RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 NRBF2Q96F24 287 aa18.37■□□□□ 0.53
SCARB1-206ENST00000539320 LYZL4Q96KX0 146 aa18.37■□□□□ 0.53
SCARB1-206ENST00000539320 CCL13Q99616 98 aa18.37■□□□□ 0.53
SCARB1-206ENST00000539320 YIPF3Q9GZM5 350 aa18.37■□□□□ 0.53
SCARB1-206ENST00000539320 SIRPDQ9H106 197 aa18.37■□□□□ 0.53
SCARB1-206ENST00000539320 PAPOLBQ9NRJ5 636 aaKnown RBP18.37■□□□□ 0.53
SCARB1-206ENST00000539320 TVP23BQ9NYZ1 205 aa18.37■□□□□ 0.53
SCARB1-206ENST00000539320 DUX4Q9UBX2 424 aa18.37■□□□□ 0.53
SCARB1-206ENST00000539320 CCDC182A6NF36 153 aa18.36■□□□□ 0.53
SCARB1-206ENST00000539320 ZNF850A8MQ14 1090 aa18.36■□□□□ 0.53
SCARB1-206ENST00000539320 CRISP1P54107 249 aa18.36■□□□□ 0.53
SCARB1-206ENST00000539320 ELF3P78545 371 aaPredicted RBP18.36■□□□□ 0.53
SCARB1-206ENST00000539320 PDCD1Q15116 288 aa18.36■□□□□ 0.53
SCARB1-206ENST00000539320 FAHD1Q6P587 224 aa18.36■□□□□ 0.53
SCARB1-206ENST00000539320 C16orf87Q6PH81 154 aa18.36■□□□□ 0.53
SCARB1-206ENST00000539320 ZDHHC23Q8IYP9 409 aa18.36■□□□□ 0.53
SCARB1-206ENST00000539320 FAM216BQ8N7L0 139 aa18.36■□□□□ 0.53
SCARB1-206ENST00000539320 OR10Z1Q8NGY1 313 aa18.36■□□□□ 0.53
SCARB1-206ENST00000539320 FAM81AQ8TBF8 368 aa18.36■□□□□ 0.53
SCARB1-206ENST00000539320 HPSE2Q8WWQ2 592 aa18.36■□□□□ 0.53
SCARB1-206ENST00000539320 GATAD2BQ8WXI9 593 aa18.36■□□□□ 0.53
SCARB1-206ENST00000539320 SEH1LQ96EE3 360 aa18.36■□□□□ 0.53
SCARB1-206ENST00000539320 PKP2Q99959 881 aa18.36■□□□□ 0.53
SCARB1-206ENST00000539320 UNKLQ9H9P5 680 aaKnown RBP18.36■□□□□ 0.53
SCARB1-206ENST00000539320 NOX4Q9NPH5 578 aa18.36■□□□□ 0.53
SCARB1-206ENST00000539320 RPUSD1Q9UJJ7 312 aaKnown RBP18.36■□□□□ 0.53
SCARB1-206ENST00000539320 CENPVL3A0A0U1RRI6 287 aa18.35■□□□□ 0.53
SCARB1-206ENST00000539320 MRPL3P09001 348 aaKnown RBP18.35■□□□□ 0.53
SCARB1-206ENST00000539320 KCTD18Q6PI47 426 aaPredicted RBP18.35■□□□□ 0.53
SCARB1-206ENST00000539320 KCTD8Q6ZWB6 473 aa18.35■□□□□ 0.53
SCARB1-206ENST00000539320 FGFRL1Q8N441 504 aa18.35■□□□□ 0.53
SCARB1-206ENST00000539320 OR5P3Q8WZ94 311 aa18.35■□□□□ 0.53
SCARB1-206ENST00000539320 PIGCQ92535 297 aa18.35■□□□□ 0.53
SCARB1-206ENST00000539320 RPL3LQ92901 407 aaKnown RBP18.35■□□□□ 0.53
SCARB1-206ENST00000539320 FGF23Q9GZV9 251 aaPredicted RBP18.35■□□□□ 0.53
SCARB1-206ENST00000539320 NKX6-3A6NJ46 265 aa18.34■□□□□ 0.53
SCARB1-206ENST00000539320 HCCSP53701 268 aa18.34■□□□□ 0.53
SCARB1-206ENST00000539320 ARF6P62330 175 aa18.34■□□□□ 0.53
SCARB1-206ENST00000539320 STUMQ69YW2 141 aa18.34■□□□□ 0.53
SCARB1-206ENST00000539320 DEGS2Q6QHC5 323 aa18.34■□□□□ 0.53
SCARB1-206ENST00000539320 LHX4Q969G2 390 aa18.34■□□□□ 0.53
SCARB1-206ENST00000539320 PRRG3Q9BZD7 231 aa18.34■□□□□ 0.53
SCARB1-206ENST00000539320 FAM206AQ9NX38 181 aa18.34■□□□□ 0.53
SCARB1-206ENST00000539320 DNAJB11Q9UBS4 358 aa18.34■□□□□ 0.53
SCARB1-206ENST00000539320 KPTNQ9Y664 436 aa18.34■□□□□ 0.53
SCARB1-206ENST00000539320 IGHV1-69DA0A0B4J2H0 117 aa18.33■□□□□ 0.52
SCARB1-206ENST00000539320 A0A0U1RQV5 110 aa18.33■□□□□ 0.52
SCARB1-206ENST00000539320 ZNF816-ZNF321PA0A0X1KG74 233 aa18.33■□□□□ 0.52
SCARB1-206ENST00000539320 ACOD1A6NK06 481 aa18.33■□□□□ 0.52
SCARB1-206ENST00000539320 PSMD9O00233 223 aa18.33■□□□□ 0.52
SCARB1-206ENST00000539320 IGHV1-69P01742 117 aa18.33■□□□□ 0.52
SCARB1-206ENST00000539320 DAPP51397 102 aa18.33■□□□□ 0.52
SCARB1-206ENST00000539320 GMFBP60983 142 aa18.33■□□□□ 0.52
SCARB1-206ENST00000539320 Q6YL49 198 aa18.33■□□□□ 0.52
SCARB1-206ENST00000539320 TMEM86BQ8N661 226 aa18.33■□□□□ 0.52
SCARB1-206ENST00000539320 SCCPDHQ8NBX0 429 aa18.33■□□□□ 0.52
SCARB1-206ENST00000539320 OR5K1Q8NHB7 308 aa18.33■□□□□ 0.52
SCARB1-206ENST00000539320 TAF15Q92804 592 aaKnown RBP eCLIP18.33■□□□□ 0.52
SCARB1-206ENST00000539320 UTP4Q969X6 686 aaKnown RBP18.33■□□□□ 0.52
SCARB1-206ENST00000539320 RNF170Q96K19 258 aa18.33■□□□□ 0.52
SCARB1-206ENST00000539320 FAM71F1Q96KD3 344 aaPredicted RBP18.33■□□□□ 0.52
SCARB1-206ENST00000539320 RAB3IPQ96QF0 476 aaPredicted RBP18.33■□□□□ 0.52
SCARB1-206ENST00000539320 TEAD3Q99594 435 aa18.33■□□□□ 0.52
SCARB1-206ENST00000539320 CADM1Q9BY67 442 aaKnown RBP18.33■□□□□ 0.52
SCARB1-206ENST00000539320 MROQ9BYG7 248 aa18.33■□□□□ 0.52
SCARB1-206ENST00000539320 CNTD2Q9H8S5 307 aa18.33■□□□□ 0.52
SCARB1-206ENST00000539320 ACOXLQ9NUZ1 547 aa18.33■□□□□ 0.52
SCARB1-206ENST00000539320 HAO2Q9NYQ3 351 aa18.33■□□□□ 0.52
SCARB1-206ENST00000539320 TMEM14AQ9Y6G1 99 aa18.33■□□□□ 0.52
SCARB1-206ENST00000539320 PRR32B1ATL7 298 aa18.32■□□□□ 0.52
SCARB1-206ENST00000539320 NDUFB3O43676 98 aa18.32■□□□□ 0.52
SCARB1-206ENST00000539320 MELTFP08582 738 aa18.32■□□□□ 0.52
SCARB1-206ENST00000539320 AMY2BP19961 511 aa18.32■□□□□ 0.52
SCARB1-206ENST00000539320 MAP2K3P46734 347 aa18.32■□□□□ 0.52
SCARB1-206ENST00000539320 ESRRGP62508 458 aa18.32■□□□□ 0.52
SCARB1-206ENST00000539320 IKZF1Q13422 519 aa18.32■□□□□ 0.52
SCARB1-206ENST00000539320 ZNF829Q3KNS6 432 aaPredicted RBP18.32■□□□□ 0.52
SCARB1-206ENST00000539320 CDONQ4KMG0 1287 aa18.32■□□□□ 0.52
SCARB1-206ENST00000539320 COMMD2Q86X83 199 aa18.32■□□□□ 0.52
SCARB1-206ENST00000539320 ASB17Q8WXJ9 295 aa18.32■□□□□ 0.52
SCARB1-206ENST00000539320 TMIGD2Q96BF3 282 aa18.32■□□□□ 0.52
SCARB1-206ENST00000539320 HIST1H2AAQ96QV6 131 aa18.32■□□□□ 0.52
SCARB1-206ENST00000539320 CNN2Q99439 309 aaKnown RBP18.32■□□□□ 0.52
SCARB1-206ENST00000539320 TTTY10Q9BZA0 68 aa18.32■□□□□ 0.52
SCARB1-206ENST00000539320 DNTTIP1Q9H147 329 aa18.32■□□□□ 0.52
SCARB1-206ENST00000539320 WDR13Q9H1Z4 485 aa18.32■□□□□ 0.52
SCARB1-206ENST00000539320 TNFRSF19Q9NS68 423 aa18.32■□□□□ 0.52
SCARB1-206ENST00000539320 SNTG1Q9NSN8 517 aa18.32■□□□□ 0.52
SCARB1-206ENST00000539320 ONECUT1Q9UBC0 465 aa18.32■□□□□ 0.52
SCARB1-206ENST00000539320 COPS3Q9UNS2 423 aa18.32■□□□□ 0.52
SCARB1-206ENST00000539320 TMEM269A0A1B0GVZ9 245 aa18.31■□□□□ 0.52
SCARB1-206ENST00000539320 POM121CA8CG34 1229 aa18.31■□□□□ 0.52
SCARB1-206ENST00000539320 GPR37O15354 613 aa18.31■□□□□ 0.52
SCARB1-206ENST00000539320 GSC2O15499 205 aa18.31■□□□□ 0.52
SCARB1-206ENST00000539320 PRKYO43930 277 aa18.31■□□□□ 0.52
SCARB1-206ENST00000539320 SELLP14151 372 aa18.31■□□□□ 0.52
SCARB1-206ENST00000539320 MDKP21741 143 aaPredicted RBP18.31■□□□□ 0.52
SCARB1-206ENST00000539320 DCTDP32321 178 aa18.31■□□□□ 0.52
SCARB1-206ENST00000539320 TGM4P49221 684 aa18.31■□□□□ 0.52
SCARB1-206ENST00000539320 RIDAP52758 137 aaKnown RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms