RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 MICU1Q9BPX6 476 aa13.87□□□□□ -0.19
VAMP1-205ENST00000535927 FUNDC2Q9BWH2 189 aa13.87□□□□□ -0.19
VAMP1-205ENST00000535927 PLEKHF2Q9H8W4 249 aa13.87□□□□□ -0.19
VAMP1-205ENST00000535927 BATF3Q9NR55 127 aa13.87□□□□□ -0.19
VAMP1-205ENST00000535927 RAI1Q7Z5J4 1906 aaPredicted RBP13.87□□□□□ -0.19
VAMP1-205ENST00000535927 DSCAMO60469 2012 aa13.86□□□□□ -0.19
VAMP1-205ENST00000535927 SMIM31A0A1B0GVY4 71 aa13.86□□□□□ -0.19
VAMP1-205ENST00000535927 TMEM210A6NLX4 147 aa13.86□□□□□ -0.19
VAMP1-205ENST00000535927 MAGEB3O15480 346 aa13.86□□□□□ -0.19
VAMP1-205ENST00000535927 AIREO43918 545 aa13.86□□□□□ -0.19
VAMP1-205ENST00000535927 CD55P08174 381 aa13.86□□□□□ -0.19
VAMP1-205ENST00000535927 IGFBP3P17936 291 aaPredicted RBP13.86□□□□□ -0.19
VAMP1-205ENST00000535927 SRMP19623 302 aa13.86□□□□□ -0.19
VAMP1-205ENST00000535927 RAB3AP20336 220 aa13.86□□□□□ -0.19
VAMP1-205ENST00000535927 ZNF81P51508 661 aa13.86□□□□□ -0.19
VAMP1-205ENST00000535927 FUT6P51993 359 aa13.86□□□□□ -0.19
VAMP1-205ENST00000535927 MST1LQ2TV78 715 aa13.86□□□□□ -0.19
VAMP1-205ENST00000535927 ZDHHC23Q8IYP9 409 aa13.86□□□□□ -0.19
VAMP1-205ENST00000535927 NKAIN3Q8N8D7 197 aa13.86□□□□□ -0.19
VAMP1-205ENST00000535927 OR51A4Q8NGJ6 313 aa13.86□□□□□ -0.19
VAMP1-205ENST00000535927 OR10AC1Q8NH08 325 aa13.86□□□□□ -0.19
VAMP1-205ENST00000535927 RAB2BQ8WUD1 216 aa13.86□□□□□ -0.19
VAMP1-205ENST00000535927 KCTD7Q96MP8 289 aa13.86□□□□□ -0.19
VAMP1-205ENST00000535927 OR14A2Q96R54 314 aa13.86□□□□□ -0.19
VAMP1-205ENST00000535927 SYT3Q9BQG1 590 aa13.86□□□□□ -0.19
VAMP1-205ENST00000535927 PAPOLGQ9BWT3 736 aaKnown RBP13.86□□□□□ -0.19
VAMP1-205ENST00000535927 TCF7L1Q9HCS4 588 aa13.86□□□□□ -0.19
VAMP1-205ENST00000535927 TMEM138Q9NPI0 162 aa13.86□□□□□ -0.19
VAMP1-205ENST00000535927 SNTG1Q9NSN8 517 aa13.86□□□□□ -0.19
VAMP1-205ENST00000535927 RHBDD3Q9Y3P4 386 aa13.86□□□□□ -0.19
VAMP1-205ENST00000535927 ARFGEF3Q5TH69 2177 aa13.86□□□□□ -0.19
VAMP1-205ENST00000535927 C17orf100A8MU93 164 aa13.85□□□□□ -0.19
VAMP1-205ENST00000535927 IFNL4K9M1U5 179 aa13.85□□□□□ -0.19
VAMP1-205ENST00000535927 PDCD5O14737 125 aa13.85□□□□□ -0.19
VAMP1-205ENST00000535927 SULT1B1O43704 296 aa13.85□□□□□ -0.19
VAMP1-205ENST00000535927 NOL3O60936 208 aaKnown RBP13.85□□□□□ -0.19
VAMP1-205ENST00000535927 FAHP16930 419 aa13.85□□□□□ -0.19
VAMP1-205ENST00000535927 ATF1P18846 271 aa13.85□□□□□ -0.19
VAMP1-205ENST00000535927 ANOS1P23352 680 aa13.85□□□□□ -0.19
VAMP1-205ENST00000535927 MYL9P24844 172 aa13.85□□□□□ -0.19
VAMP1-205ENST00000535927 SRP9P49458 86 aaKnown RBP13.85□□□□□ -0.19
VAMP1-205ENST00000535927 OR8G1Q15617 311 aa13.85□□□□□ -0.19
VAMP1-205ENST00000535927 MSMPQ1L6U9 139 aa13.85□□□□□ -0.19
VAMP1-205ENST00000535927 FAM76BQ5HYJ3 339 aa13.85□□□□□ -0.19
VAMP1-205ENST00000535927 TMEM200AQ86VY9 491 aa13.85□□□□□ -0.19
VAMP1-205ENST00000535927 UBASH3BQ8TF42 649 aa13.85□□□□□ -0.19
VAMP1-205ENST00000535927 PIGCQ92535 297 aa13.85□□□□□ -0.19
VAMP1-205ENST00000535927 NEUROG1Q92886 237 aa13.85□□□□□ -0.19
VAMP1-205ENST00000535927 MARVELD3Q96A59 401 aa13.85□□□□□ -0.19
VAMP1-205ENST00000535927 ADAT3Q96EY9 351 aaPredicted RBP13.85□□□□□ -0.19
VAMP1-205ENST00000535927 TRAF4Q9BUZ4 470 aaPredicted RBP13.85□□□□□ -0.19
VAMP1-205ENST00000535927 RTL8AQ9BWD3 113 aa13.85□□□□□ -0.19
VAMP1-205ENST00000535927 EGLN1Q9GZT9 426 aa13.85□□□□□ -0.19
VAMP1-205ENST00000535927 RAB1BQ9H0U4 201 aa13.85□□□□□ -0.19
VAMP1-205ENST00000535927 CXXC4Q9H2H0 198 aa13.85□□□□□ -0.19
VAMP1-205ENST00000535927 DYNLRB1Q9NP97 96 aa13.85□□□□□ -0.19
VAMP1-205ENST00000535927 NOX4Q9NPH5 578 aa13.85□□□□□ -0.19
VAMP1-205ENST00000535927 TXNL4BQ9NX01 149 aaKnown RBP13.85□□□□□ -0.19
VAMP1-205ENST00000535927 IL19Q9UHD0 177 aa13.85□□□□□ -0.19
VAMP1-205ENST00000535927 GABARAPO95166 117 aa13.84□□□□□ -0.19
VAMP1-205ENST00000535927 PTBP3O95758 552 aaKnown RBP13.84□□□□□ -0.19
VAMP1-205ENST00000535927 OCMP0CE72 109 aaPredicted RBP13.84□□□□□ -0.19
VAMP1-205ENST00000535927 CD37P11049 281 aa13.84□□□□□ -0.19
VAMP1-205ENST00000535927 TNFRSF1AP19438 455 aa13.84□□□□□ -0.19
VAMP1-205ENST00000535927 GADD45AP24522 165 aa13.84□□□□□ -0.19
VAMP1-205ENST00000535927 COL8A1P27658 744 aa13.84□□□□□ -0.19
VAMP1-205ENST00000535927 CD200P41217 278 aa13.84□□□□□ -0.19
VAMP1-205ENST00000535927 SOX2P48431 317 aa13.84□□□□□ -0.19
VAMP1-205ENST00000535927 MTNR1BP49286 362 aa13.84□□□□□ -0.19
VAMP1-205ENST00000535927 GNG3P63215 75 aa13.84□□□□□ -0.19
VAMP1-205ENST00000535927 PRDX4Q13162 271 aa13.84□□□□□ -0.19
VAMP1-205ENST00000535927 C11orf71Q6IPW1 123 aa13.84□□□□□ -0.19
VAMP1-205ENST00000535927 LHFPL2Q6ZUX7 228 aa13.84□□□□□ -0.19
VAMP1-205ENST00000535927 LRP11Q86VZ4 500 aa13.84□□□□□ -0.19
VAMP1-205ENST00000535927 CROCCP3Q8IVE0 287 aa13.84□□□□□ -0.19
VAMP1-205ENST00000535927 OR1M1Q8NGA1 313 aa13.84□□□□□ -0.19
VAMP1-205ENST00000535927 OR8S1Q8NH09 359 aa13.84□□□□□ -0.19
VAMP1-205ENST00000535927 NEU4Q8WWR8 484 aaPredicted RBP13.84□□□□□ -0.19
VAMP1-205ENST00000535927 OR5P3Q8WZ94 311 aa13.84□□□□□ -0.19
VAMP1-205ENST00000535927 TMIGD2Q96BF3 282 aa13.84□□□□□ -0.19
VAMP1-205ENST00000535927 ITPKCQ96DU7 683 aa13.84□□□□□ -0.19
VAMP1-205ENST00000535927 SOX7Q9BT81 388 aa13.84□□□□□ -0.19
VAMP1-205ENST00000535927 EXOSC4Q9NPD3 245 aaKnown RBP13.84□□□□□ -0.19
VAMP1-205ENST00000535927 TRIM64BA6NI03 449 aa13.83□□□□□ -0.2
VAMP1-205ENST00000535927 ZNF850A8MQ14 1090 aa13.83□□□□□ -0.2
VAMP1-205ENST00000535927 H7C417 338 aa13.83□□□□□ -0.2
VAMP1-205ENST00000535927 PRF1P14222 555 aa13.83□□□□□ -0.2
VAMP1-205ENST00000535927 CA6P23280 308 aa13.83□□□□□ -0.2
VAMP1-205ENST00000535927 BDKRB2P30411 391 aa13.83□□□□□ -0.2
VAMP1-205ENST00000535927 GATA4P43694 442 aa13.83□□□□□ -0.2
VAMP1-205ENST00000535927 RBP2P50120 134 aa13.83□□□□□ -0.2
VAMP1-205ENST00000535927 CAPZA1P52907 286 aa13.83□□□□□ -0.2
VAMP1-205ENST00000535927 ATP1B3P54709 279 aa13.83□□□□□ -0.2
VAMP1-205ENST00000535927 MRPS11P82912 194 aaKnown RBP13.83□□□□□ -0.2
VAMP1-205ENST00000535927 TESK1Q15569 626 aa13.83□□□□□ -0.2
VAMP1-205ENST00000535927 MOB3CQ70IA8 216 aa13.83□□□□□ -0.2
VAMP1-205ENST00000535927 ZNF573Q86YE8 665 aa13.83□□□□□ -0.2
VAMP1-205ENST00000535927 OR5AS1Q8N127 324 aa13.83□□□□□ -0.2
VAMP1-205ENST00000535927 BHLHE23Q8NDY6 225 aa13.83□□□□□ -0.2
VAMP1-205ENST00000535927 CHCHD6Q9BRQ6 235 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 404.5 ms