RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 AUNIPQ9H7T9 357 aa16.3■□□□□ 0.2
SFSWAP-203ENST00000535236 FBXO8Q9NRD0 319 aa16.3■□□□□ 0.2
SFSWAP-203ENST00000535236 EVX1P49640 407 aa16.3■□□□□ 0.2
SFSWAP-203ENST00000535236 METAP1P53582 386 aa16.3■□□□□ 0.2
SFSWAP-203ENST00000535236 PDZD11Q5EBL8 140 aa16.3■□□□□ 0.2
SFSWAP-203ENST00000535236 TMEM108Q6UXF1 575 aa16.3■□□□□ 0.2
SFSWAP-203ENST00000535236 ADGRG7Q96K78 797 aa16.3■□□□□ 0.2
SFSWAP-203ENST00000535236 OR8B4Q96RC9 309 aa16.3■□□□□ 0.2
SFSWAP-203ENST00000535236 GPNMBQ14956 572 aa16.29■□□□□ 0.2
SFSWAP-203ENST00000535236 SLC24A4Q8NFF2 622 aa16.29■□□□□ 0.2
SFSWAP-203ENST00000535236 OR13G1Q8NGZ3 307 aa16.29■□□□□ 0.2
SFSWAP-203ENST00000535236 DYNC2LI1Q8TCX1 351 aa16.29■□□□□ 0.2
SFSWAP-203ENST00000535236 NGFP01138 241 aa16.29■□□□□ 0.2
SFSWAP-203ENST00000535236 S100A8P05109 93 aa16.29■□□□□ 0.2
SFSWAP-203ENST00000535236 LIMS3P0CW19 117 aa16.29■□□□□ 0.2
SFSWAP-203ENST00000535236 LIMS4P0CW20 117 aa16.29■□□□□ 0.2
SFSWAP-203ENST00000535236 RIMKLAQ8IXN7 391 aa16.29■□□□□ 0.2
SFSWAP-203ENST00000535236 NHLRC2Q8NBF2 726 aa16.29■□□□□ 0.2
SFSWAP-203ENST00000535236 PRDM7Q9NQW5 492 aa16.29■□□□□ 0.2
SFSWAP-203ENST00000535236 KCNE3Q9Y6H6 103 aa16.29■□□□□ 0.2
SFSWAP-203ENST00000535236 SERTM1A2A2V5 107 aa16.29■□□□□ 0.2
SFSWAP-203ENST00000535236 FABP9Q0Z7S8 132 aa16.29■□□□□ 0.2
SFSWAP-203ENST00000535236 IGHV1OR21-1A0A087WYE8 117 aa16.29■□□□□ 0.2
SFSWAP-203ENST00000535236 SNRPGP15A8MWD9 76 aa16.29■□□□□ 0.2
SFSWAP-203ENST00000535236 ZNF17P17021 662 aa16.29■□□□□ 0.2
SFSWAP-203ENST00000535236 CCL17Q92583 94 aa16.29■□□□□ 0.2
SFSWAP-203ENST00000535236 TNFRSF12AQ9NP84 129 aa16.29■□□□□ 0.2
SFSWAP-203ENST00000535236 YTHDF2Q9Y5A9 579 aaKnown RBP16.29■□□□□ 0.2
SFSWAP-203ENST00000535236 IGHV5-51A0A0C4DH38 117 aa16.29■□□□□ 0.2
SFSWAP-203ENST00000535236 UBE2L5PA0A1B0GUS4 154 aa16.29■□□□□ 0.2
SFSWAP-203ENST00000535236 TMEM231Q9H6L2 316 aa16.29■□□□□ 0.2
SFSWAP-203ENST00000535236 SLC2A8Q9NY64 477 aa16.29■□□□□ 0.2
SFSWAP-203ENST00000535236 A0A1B0GUH1 482 aa16.28■□□□□ 0.2
SFSWAP-203ENST00000535236 HRASP01112 189 aa16.28■□□□□ 0.2
SFSWAP-203ENST00000535236 CD37P11049 281 aa16.28■□□□□ 0.2
SFSWAP-203ENST00000535236 DCTDP32321 178 aa16.28■□□□□ 0.2
SFSWAP-203ENST00000535236 TCTN1Q2MV58 587 aa16.28■□□□□ 0.2
SFSWAP-203ENST00000535236 CA6P23280 308 aa16.28■□□□□ 0.2
SFSWAP-203ENST00000535236 MISP3Q96FF7 219 aa16.28■□□□□ 0.2
SFSWAP-203ENST00000535236 DUSP21Q9H596 190 aa16.28■□□□□ 0.2
SFSWAP-203ENST00000535236 RAB18Q9NP72 206 aa16.28■□□□□ 0.2
SFSWAP-203ENST00000535236 ZFP64Q9NPA5 681 aa16.28■□□□□ 0.2
SFSWAP-203ENST00000535236 ZNF586Q9NXT0 402 aa16.28■□□□□ 0.2
SFSWAP-203ENST00000535236 TRAV1-2A0A0B4J238 106 aa16.28■□□□□ 0.2
SFSWAP-203ENST00000535236 SPP1P10451 314 aa16.28■□□□□ 0.2
SFSWAP-203ENST00000535236 TMEM229BQ8NBD8 167 aa16.28■□□□□ 0.2
SFSWAP-203ENST00000535236 TGIF2Q9GZN2 237 aa16.28■□□□□ 0.2
SFSWAP-203ENST00000535236 TAAR3PQ9P1P4 343 aa16.28■□□□□ 0.2
SFSWAP-203ENST00000535236 PLEKHB1Q9UF11 243 aaPredicted RBP16.28■□□□□ 0.2
SFSWAP-203ENST00000535236 MTCH2Q9Y6C9 303 aa16.28■□□□□ 0.2
SFSWAP-203ENST00000535236 ANKRD36CQ5JPF3 1778 aa16.28■□□□□ 0.2
SFSWAP-203ENST00000535236 Q6ZNX1 250 aa16.28■□□□□ 0.2
SFSWAP-203ENST00000535236 MOB1BQ7L9L4 216 aa16.28■□□□□ 0.2
SFSWAP-203ENST00000535236 CMBLQ96DG6 245 aa16.28■□□□□ 0.2
SFSWAP-203ENST00000535236 ZNF71Q9NQZ8 489 aaPredicted RBP16.28■□□□□ 0.2
SFSWAP-203ENST00000535236 PPIL1Q9Y3C6 166 aa16.28■□□□□ 0.2
SFSWAP-203ENST00000535236 LOXHD1Q8IVV2 1947 aa16.27■□□□□ 0.2
SFSWAP-203ENST00000535236 TCAPO15273 167 aa16.27■□□□□ 0.2
SFSWAP-203ENST00000535236 TMEM127O75204 238 aa16.27■□□□□ 0.2
SFSWAP-203ENST00000535236 PPP1CAP62136 330 aa16.27■□□□□ 0.2
SFSWAP-203ENST00000535236 H3F3AP84243 136 aa16.27■□□□□ 0.2
SFSWAP-203ENST00000535236 TNFAIP6P98066 277 aaPredicted RBP16.27■□□□□ 0.2
SFSWAP-203ENST00000535236 NCR3LG1Q68D85 454 aa16.27■□□□□ 0.2
SFSWAP-203ENST00000535236 TMEM179BQ7Z7N9 219 aa16.27■□□□□ 0.2
SFSWAP-203ENST00000535236 LYG1Q8N1E2 194 aa16.27■□□□□ 0.2
SFSWAP-203ENST00000535236 ADGRL4Q9HBW9 690 aa16.27■□□□□ 0.2
SFSWAP-203ENST00000535236 MMP25Q9NPA2 562 aa16.27■□□□□ 0.2
SFSWAP-203ENST00000535236 SLC17A2O00624 439 aa16.27■□□□□ 0.2
SFSWAP-203ENST00000535236 EPXP11678 715 aa16.27■□□□□ 0.2
SFSWAP-203ENST00000535236 EPHA8P29322 1005 aaPredicted RBP16.27■□□□□ 0.2
SFSWAP-203ENST00000535236 CEACAM6P40199 344 aa16.27■□□□□ 0.2
SFSWAP-203ENST00000535236 HES3Q5TGS1 186 aa16.27■□□□□ 0.2
SFSWAP-203ENST00000535236 JMJD6Q6NYC1 403 aaPredicted RBP16.27■□□□□ 0.2
SFSWAP-203ENST00000535236 HGDQ93099 445 aa16.27■□□□□ 0.2
SFSWAP-203ENST00000535236 SERGEFQ9UGK8 458 aa16.27■□□□□ 0.2
SFSWAP-203ENST00000535236 H3BP45 60 aa16.27■□□□□ 0.2
SFSWAP-203ENST00000535236 NKX2-2O95096 273 aa16.27■□□□□ 0.2
SFSWAP-203ENST00000535236 SMIM18P0DKX4 95 aa16.27■□□□□ 0.2
SFSWAP-203ENST00000535236 RPL13AP40429 203 aaKnown RBP16.27■□□□□ 0.2
SFSWAP-203ENST00000535236 DGAT2L6Q6ZPD8 337 aa16.27■□□□□ 0.2
SFSWAP-203ENST00000535236 OR4C16Q8NGL9 310 aa16.27■□□□□ 0.2
SFSWAP-203ENST00000535236 SLC26A1Q9H2B4 701 aa16.27■□□□□ 0.2
SFSWAP-203ENST00000535236 RFPL4AA6NLU0 287 aa16.27■□□□□ 0.19
SFSWAP-203ENST00000535236 RFPL4AL1F8VTS6 287 aa16.27■□□□□ 0.19
SFSWAP-203ENST00000535236 KRASP01116 189 aa16.27■□□□□ 0.19
SFSWAP-203ENST00000535236 BAP18Q8IXM2 172 aa16.27■□□□□ 0.19
SFSWAP-203ENST00000535236 OR2A5Q96R48 311 aa16.27■□□□□ 0.19
SFSWAP-203ENST00000535236 TMEM147Q9BVK8 224 aa16.27■□□□□ 0.19
SFSWAP-203ENST00000535236 A0A0B4J2E0 115 aa16.27■□□□□ 0.19
SFSWAP-203ENST00000535236 A0A1B0GX12 115 aa16.27■□□□□ 0.19
SFSWAP-203ENST00000535236 FZD5Q13467 585 aa16.27■□□□□ 0.19
SFSWAP-203ENST00000535236 IGFBP7Q16270 282 aa16.27■□□□□ 0.19
SFSWAP-203ENST00000535236 BCL2L2Q92843 193 aaPredicted RBP16.27■□□□□ 0.19
SFSWAP-203ENST00000535236 RAB1BQ9H0U4 201 aa16.27■□□□□ 0.19
SFSWAP-203ENST00000535236 MPGP29372 298 aa16.26■□□□□ 0.19
SFSWAP-203ENST00000535236 OR4D9Q8NGE8 314 aa16.26■□□□□ 0.19
SFSWAP-203ENST00000535236 ST8SIA2Q92186 375 aa16.26■□□□□ 0.19
SFSWAP-203ENST00000535236 DERL3Q96Q80 235 aa16.26■□□□□ 0.19
SFSWAP-203ENST00000535236 CABLES2Q9BTV7 478 aa16.26■□□□□ 0.19
SFSWAP-203ENST00000535236 GAL3ST2Q9H3Q3 398 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms