RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 DAPP51397 102 aa12.79□□□□□ -0.36
CPSF1-211ENST00000533492 GMFBP60983 142 aa12.79□□□□□ -0.36
CPSF1-211ENST00000533492 PDCD1Q15116 288 aa12.79□□□□□ -0.36
CPSF1-211ENST00000533492 PTGES3Q15185 160 aaKnown RBP12.79□□□□□ -0.36
CPSF1-211ENST00000533492 WDR38Q5JTN6 314 aa12.79□□□□□ -0.36
CPSF1-211ENST00000533492 C16orf87Q6PH81 154 aa12.79□□□□□ -0.36
CPSF1-211ENST00000533492 DEGS2Q6QHC5 323 aa12.79□□□□□ -0.36
CPSF1-211ENST00000533492 ZDHHC23Q8IYP9 409 aa12.79□□□□□ -0.36
CPSF1-211ENST00000533492 OR5K1Q8NHB7 308 aa12.79□□□□□ -0.36
CPSF1-211ENST00000533492 GATAD2BQ8WXI9 593 aa12.79□□□□□ -0.36
CPSF1-211ENST00000533492 OR5P3Q8WZ94 311 aa12.79□□□□□ -0.36
CPSF1-211ENST00000533492 C12orf43Q96C57 262 aaKnown RBP12.79□□□□□ -0.36
CPSF1-211ENST00000533492 LYZL4Q96KX0 146 aa12.79□□□□□ -0.36
CPSF1-211ENST00000533492 PKP2Q99959 881 aa12.79□□□□□ -0.36
CPSF1-211ENST00000533492 ZNF747Q9BV97 191 aa12.79□□□□□ -0.36
CPSF1-211ENST00000533492 CADM1Q9BY67 442 aaKnown RBP12.79□□□□□ -0.36
CPSF1-211ENST00000533492 FAM53CQ9NYF3 392 aa12.79□□□□□ -0.36
CPSF1-211ENST00000533492 H2AFY2Q9P0M6 372 aaPredicted RBP12.79□□□□□ -0.36
CPSF1-211ENST00000533492 DNAJB11Q9UBS4 358 aa12.79□□□□□ -0.36
CPSF1-211ENST00000533492 TMEM14AQ9Y6G1 99 aa12.79□□□□□ -0.36
CPSF1-211ENST00000533492 ACOD1A6NK06 481 aa12.78□□□□□ -0.36
CPSF1-211ENST00000533492 SRRM5B3KS81 715 aa12.78□□□□□ -0.36
CPSF1-211ENST00000533492 PSMD9O00233 223 aa12.78□□□□□ -0.36
CPSF1-211ENST00000533492 MMP9P14780 707 aa12.78□□□□□ -0.36
CPSF1-211ENST00000533492 RASSF2P50749 326 aa12.78□□□□□ -0.36
CPSF1-211ENST00000533492 ESRRGP62508 458 aa12.78□□□□□ -0.36
CPSF1-211ENST00000533492 IL13RA1P78552 427 aa12.78□□□□□ -0.36
CPSF1-211ENST00000533492 RUSC1-AS1Q66K80 236 aa12.78□□□□□ -0.36
CPSF1-211ENST00000533492 FAHD1Q6P587 224 aa12.78□□□□□ -0.36
CPSF1-211ENST00000533492 SHISA2Q6UWI4 295 aa12.78□□□□□ -0.36
CPSF1-211ENST00000533492 COMMD2Q86X83 199 aa12.78□□□□□ -0.36
CPSF1-211ENST00000533492 OR5T2Q8NGG2 359 aa12.78□□□□□ -0.36
CPSF1-211ENST00000533492 OR10Z1Q8NGY1 313 aa12.78□□□□□ -0.36
CPSF1-211ENST00000533492 RPL3LQ92901 407 aaKnown RBP12.78□□□□□ -0.36
CPSF1-211ENST00000533492 LHX4Q969G2 390 aa12.78□□□□□ -0.36
CPSF1-211ENST00000533492 UTP4Q969X6 686 aaKnown RBP12.78□□□□□ -0.36
CPSF1-211ENST00000533492 SEH1LQ96EE3 360 aa12.78□□□□□ -0.36
CPSF1-211ENST00000533492 FAM71F1Q96KD3 344 aaPredicted RBP12.78□□□□□ -0.36
CPSF1-211ENST00000533492 TBX15Q96SF7 602 aa12.78□□□□□ -0.36
CPSF1-211ENST00000533492 TLNRD1Q9H1K6 362 aa12.78□□□□□ -0.36
CPSF1-211ENST00000533492 NOX4Q9NPH5 578 aa12.78□□□□□ -0.36
CPSF1-211ENST00000533492 TNFRSF19Q9NS68 423 aa12.78□□□□□ -0.36
CPSF1-211ENST00000533492 KRT84Q9NSB2 600 aa12.78□□□□□ -0.36
CPSF1-211ENST00000533492 HAO2Q9NYQ3 351 aa12.78□□□□□ -0.36
CPSF1-211ENST00000533492 RPUSD1Q9UJJ7 312 aaKnown RBP12.78□□□□□ -0.36
CPSF1-211ENST00000533492 CENPVL3A0A0U1RRI6 287 aa12.77□□□□□ -0.37
CPSF1-211ENST00000533492 ZNF816-ZNF321PA0A0X1KG74 233 aa12.77□□□□□ -0.37
CPSF1-211ENST00000533492 G3V2T6 193 aa12.77□□□□□ -0.37
CPSF1-211ENST00000533492 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.77□□□□□ -0.37
CPSF1-211ENST00000533492 GPR37O15354 613 aa12.77□□□□□ -0.37
CPSF1-211ENST00000533492 SPRY1O43609 319 aaPredicted RBP12.77□□□□□ -0.37
CPSF1-211ENST00000533492 ZNF254O75437 659 aa12.77□□□□□ -0.37
CPSF1-211ENST00000533492 CRYBA1P05813 215 aa12.77□□□□□ -0.37
CPSF1-211ENST00000533492 ELF3P78545 371 aaPredicted RBP12.77□□□□□ -0.37
CPSF1-211ENST00000533492 BNIP1Q12981 228 aa12.77□□□□□ -0.37
CPSF1-211ENST00000533492 IKZF1Q13422 519 aa12.77□□□□□ -0.37
CPSF1-211ENST00000533492 LRRC10Q5BKY1 277 aa12.77□□□□□ -0.37
CPSF1-211ENST00000533492 Q6YL49 198 aa12.77□□□□□ -0.37
CPSF1-211ENST00000533492 THAP5Q7Z6K1 395 aa12.77□□□□□ -0.37
CPSF1-211ENST00000533492 ZNF679Q8IYX0 411 aa12.77□□□□□ -0.37
CPSF1-211ENST00000533492 FAM216BQ8N7L0 139 aa12.77□□□□□ -0.37
CPSF1-211ENST00000533492 SCCPDHQ8NBX0 429 aa12.77□□□□□ -0.37
CPSF1-211ENST00000533492 ASB17Q8WXJ9 295 aa12.77□□□□□ -0.37
CPSF1-211ENST00000533492 CNN2Q99439 309 aaKnown RBP12.77□□□□□ -0.37
CPSF1-211ENST00000533492 SIRPDQ9H106 197 aa12.77□□□□□ -0.37
CPSF1-211ENST00000533492 PRDM13Q9H4Q3 707 aa12.77□□□□□ -0.37
CPSF1-211ENST00000533492 UNKLQ9H9P5 680 aaKnown RBP12.77□□□□□ -0.37
CPSF1-211ENST00000533492 SNTG1Q9NSN8 517 aa12.77□□□□□ -0.37
CPSF1-211ENST00000533492 ACOXLQ9NUZ1 547 aa12.77□□□□□ -0.37
CPSF1-211ENST00000533492 IKZF2Q9UKS7 526 aa12.77□□□□□ -0.37
CPSF1-211ENST00000533492 IGHV1-69DA0A0B4J2H0 117 aa12.76□□□□□ -0.37
CPSF1-211ENST00000533492 A0A0U1RQV5 110 aa12.76□□□□□ -0.37
CPSF1-211ENST00000533492 A0A1B0GW55 424 aa12.76□□□□□ -0.37
CPSF1-211ENST00000533492 CCDC182A6NF36 153 aa12.76□□□□□ -0.37
CPSF1-211ENST00000533492 NKX6-3A6NJ46 265 aa12.76□□□□□ -0.37
CPSF1-211ENST00000533492 POM121CA8CG34 1229 aa12.76□□□□□ -0.37
CPSF1-211ENST00000533492 AKR7A2O43488 359 aa12.76□□□□□ -0.37
CPSF1-211ENST00000533492 PRKYO43930 277 aa12.76□□□□□ -0.37
CPSF1-211ENST00000533492 FCN3O75636 299 aa12.76□□□□□ -0.37
CPSF1-211ENST00000533492 IGHV1-69P01742 117 aa12.76□□□□□ -0.37
CPSF1-211ENST00000533492 DUX4L2P0CJ85 424 aa12.76□□□□□ -0.37
CPSF1-211ENST00000533492 DUX4L3P0CJ86 424 aa12.76□□□□□ -0.37
CPSF1-211ENST00000533492 DUX4L4P0CJ87 422 aa12.76□□□□□ -0.37
CPSF1-211ENST00000533492 DUX4L5P0CJ88 424 aa12.76□□□□□ -0.37
CPSF1-211ENST00000533492 DUX4L6P0CJ89 424 aa12.76□□□□□ -0.37
CPSF1-211ENST00000533492 DUX4L7P0CJ90 424 aa12.76□□□□□ -0.37
CPSF1-211ENST00000533492 ATP6V1B1P15313 513 aa12.76□□□□□ -0.37
CPSF1-211ENST00000533492 DCTDP32321 178 aa12.76□□□□□ -0.37
CPSF1-211ENST00000533492 GPM6AP51674 278 aa12.76□□□□□ -0.37
CPSF1-211ENST00000533492 RIDAP52758 137 aaKnown RBP12.76□□□□□ -0.37
CPSF1-211ENST00000533492 ACTR3P61158 418 aa12.76□□□□□ -0.37
CPSF1-211ENST00000533492 RIPPLY1Q0D2K3 151 aa12.76□□□□□ -0.37
CPSF1-211ENST00000533492 ZNF829Q3KNS6 432 aaPredicted RBP12.76□□□□□ -0.37
CPSF1-211ENST00000533492 CDONQ4KMG0 1287 aa12.76□□□□□ -0.37
CPSF1-211ENST00000533492 FAM76BQ5HYJ3 339 aa12.76□□□□□ -0.37
CPSF1-211ENST00000533492 DUX4L9Q6RFH8 374 aaPredicted RBP12.76□□□□□ -0.37
CPSF1-211ENST00000533492 CMTM4Q8IZR5 234 aa12.76□□□□□ -0.37
CPSF1-211ENST00000533492 FGFRL1Q8N441 504 aa12.76□□□□□ -0.37
CPSF1-211ENST00000533492 TCEANCQ8N8B7 351 aa12.76□□□□□ -0.37
CPSF1-211ENST00000533492 ITFG2Q969R8 447 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms