RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 PTX4Q96A99 478 aa2.94□□□□□ -1.94
USP47-211ENST00000531513 BMFQ96LC9 184 aa2.94□□□□□ -1.94
USP47-211ENST00000531513 HSD17B10Q99714 261 aaKnown RBP2.94□□□□□ -1.94
USP47-211ENST00000531513 PAIP2Q9BPZ3 127 aaKnown RBP2.94□□□□□ -1.94
USP47-211ENST00000531513 TMEM243Q9BU79 118 aa2.94□□□□□ -1.94
USP47-211ENST00000531513 SAMD10Q9BYL1 202 aa2.94□□□□□ -1.94
USP47-211ENST00000531513 SLC25A39Q9BZJ4 359 aaPredicted RBP2.94□□□□□ -1.94
USP47-211ENST00000531513 COA1Q9GZY4 146 aa2.94□□□□□ -1.94
USP47-211ENST00000531513 IFI27L2Q9H2X8 130 aa2.94□□□□□ -1.94
USP47-211ENST00000531513 PRORYQ9H606 182 aa2.94□□□□□ -1.94
USP47-211ENST00000531513 RPP21Q9H633 154 aaKnown RBP2.94□□□□□ -1.94
USP47-211ENST00000531513 RAB23Q9ULC3 237 aa2.94□□□□□ -1.94
USP47-211ENST00000531513 NDRG2Q9UN36 371 aaKnown RBP2.94□□□□□ -1.94
USP47-211ENST00000531513 HES2Q9Y543 173 aa2.94□□□□□ -1.94
USP47-211ENST00000531513 URGCP-MRPS24S4R325 110 aa2.94□□□□□ -1.94
USP47-211ENST00000531513 BRCA1P38398 1863 aaKnown RBP2.94□□□□□ -1.94
USP47-211ENST00000531513 PRRC2AP48634 2157 aaKnown RBP2.94□□□□□ -1.94
USP47-211ENST00000531513 MEGF6O75095 1541 aa2.93□□□□□ -1.94
USP47-211ENST00000531513 IGKV1-27A0A075B6S5 117 aa2.93□□□□□ -1.94
USP47-211ENST00000531513 TRAV19A0A0A6YYK7 116 aa2.93□□□□□ -1.94
USP47-211ENST00000531513 A0A1B0GVX0 72 aa2.93□□□□□ -1.94
USP47-211ENST00000531513 MKRN2OSH3BPM6 223 aa2.93□□□□□ -1.94
USP47-211ENST00000531513 TNFRSF11BO00300 401 aa2.93□□□□□ -1.94
USP47-211ENST00000531513 TOR1AO14656 332 aa2.93□□□□□ -1.94
USP47-211ENST00000531513 TAAR5O14804 337 aa2.93□□□□□ -1.94
USP47-211ENST00000531513 MYL12BO14950 172 aa2.93□□□□□ -1.94
USP47-211ENST00000531513 TLX1NBP0CAT3 122 aa2.93□□□□□ -1.94
USP47-211ENST00000531513 SLC35E2BP0CK96 405 aa2.93□□□□□ -1.94
USP47-211ENST00000531513 DTYMKP23919 212 aa2.93□□□□□ -1.94
USP47-211ENST00000531513 PSMB6P28072 239 aa2.93□□□□□ -1.94
USP47-211ENST00000531513 TEAD1P28347 426 aa2.93□□□□□ -1.94
USP47-211ENST00000531513 PCK1P35558 622 aa2.93□□□□□ -1.94
USP47-211ENST00000531513 GFERP55789 205 aa2.93□□□□□ -1.94
USP47-211ENST00000531513 OR12D2P58182 307 aa2.93□□□□□ -1.94
USP47-211ENST00000531513 INCA1Q0VD86 236 aa2.93□□□□□ -1.94
USP47-211ENST00000531513 TPBGQ13641 420 aa2.93□□□□□ -1.94
USP47-211ENST00000531513 RBMY1FQ15415 496 aaKnown RBP2.93□□□□□ -1.94
USP47-211ENST00000531513 C5orf47Q569G3 176 aa2.93□□□□□ -1.94
USP47-211ENST00000531513 AHSA2Q719I0 299 aa2.93□□□□□ -1.94
USP47-211ENST00000531513 C15orf56Q8N910 161 aa2.93□□□□□ -1.94
USP47-211ENST00000531513 OR1S1Q8NH92 325 aa2.93□□□□□ -1.94
USP47-211ENST00000531513 RXFP4Q8TDU9 374 aa2.93□□□□□ -1.94
USP47-211ENST00000531513 LRRC45Q96CN5 670 aa2.93□□□□□ -1.94
USP47-211ENST00000531513 SMARCD1Q96GM5 515 aa2.93□□□□□ -1.94
USP47-211ENST00000531513 CEP170P1Q96L14 293 aa2.93□□□□□ -1.94
USP47-211ENST00000531513 Q96MT0 163 aa2.93□□□□□ -1.94
USP47-211ENST00000531513 ZNF396Q96N95 335 aaPredicted RBP2.93□□□□□ -1.94
USP47-211ENST00000531513 OR2A5Q96R48 311 aa2.93□□□□□ -1.94
USP47-211ENST00000531513 VAT1Q99536 393 aa2.93□□□□□ -1.94
USP47-211ENST00000531513 PDCD1LG2Q9BQ51 273 aa2.93□□□□□ -1.94
USP47-211ENST00000531513 EMC6Q9BV81 110 aa2.93□□□□□ -1.94
USP47-211ENST00000531513 WDR55Q9H6Y2 383 aaPredicted RBP2.93□□□□□ -1.94
USP47-211ENST00000531513 PDFQ9HBH1 243 aa2.93□□□□□ -1.94
USP47-211ENST00000531513 SIRT7Q9NRC8 400 aa2.93□□□□□ -1.94
USP47-211ENST00000531513 RBFOX1Q9NWB1 397 aaKnown RBP2.93□□□□□ -1.94
USP47-211ENST00000531513 EURLQ9NYK6 297 aa2.93□□□□□ -1.94
USP47-211ENST00000531513 SLC7A11Q9UPY5 501 aa2.93□□□□□ -1.94
USP47-211ENST00000531513 A0A1B0GTI1 187 aa2.92□□□□□ -1.94
USP47-211ENST00000531513 TRIM49D1C9J1S8 452 aa2.92□□□□□ -1.94
USP47-211ENST00000531513 KRBOX1C9JBD0 128 aa2.92□□□□□ -1.94
USP47-211ENST00000531513 CLDN34H7C241 214 aa2.92□□□□□ -1.94
USP47-211ENST00000531513 PANO1I0J062 215 aa2.92□□□□□ -1.94
USP47-211ENST00000531513 J3QT63 122 aa2.92□□□□□ -1.94
USP47-211ENST00000531513 REM1O75628 298 aa2.92□□□□□ -1.94
USP47-211ENST00000531513 SLC22A5O76082 557 aa2.92□□□□□ -1.94
USP47-211ENST00000531513 GLSO94925 669 aaPredicted RBP2.92□□□□□ -1.94
USP47-211ENST00000531513 GP1BAP07359 652 aa2.92□□□□□ -1.94
USP47-211ENST00000531513 MMP7P09237 267 aaPredicted RBP2.92□□□□□ -1.94
USP47-211ENST00000531513 HSPD1P10809 573 aaKnown RBP2.92□□□□□ -1.94
USP47-211ENST00000531513 SYT1P21579 422 aa2.92□□□□□ -1.94
USP47-211ENST00000531513 UGT2B10P36537 528 aa2.92□□□□□ -1.94
USP47-211ENST00000531513 XKP51811 444 aa2.92□□□□□ -1.94
USP47-211ENST00000531513 SKP1P63208 163 aa2.92□□□□□ -1.94
USP47-211ENST00000531513 CRADDP78560 199 aa2.92□□□□□ -1.94
USP47-211ENST00000531513 CYP24A1Q07973 514 aa2.92□□□□□ -1.94
USP47-211ENST00000531513 TOMM34Q15785 309 aaPredicted RBP2.92□□□□□ -1.94
USP47-211ENST00000531513 PRSS8Q16651 343 aa2.92□□□□□ -1.94
USP47-211ENST00000531513 SYT6Q5T7P8 510 aaPredicted RBP2.92□□□□□ -1.94
USP47-211ENST00000531513 TMEM236Q5W0B7 351 aa2.92□□□□□ -1.94
USP47-211ENST00000531513 KDM4DQ6B0I6 523 aa2.92□□□□□ -1.94
USP47-211ENST00000531513 TMEM205Q6UW68 189 aa2.92□□□□□ -1.94
USP47-211ENST00000531513 Q6ZT83 130 aa2.92□□□□□ -1.94
USP47-211ENST00000531513 LGI3Q8N145 548 aa2.92□□□□□ -1.94
USP47-211ENST00000531513 LRRC52Q8N7C0 313 aa2.92□□□□□ -1.94
USP47-211ENST00000531513 NT5CQ8TCD5 201 aa2.92□□□□□ -1.94
USP47-211ENST00000531513 RNF138Q8WVD3 245 aa2.92□□□□□ -1.94
USP47-211ENST00000531513 IFT81Q8WYA0 676 aa2.92□□□□□ -1.94
USP47-211ENST00000531513 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.92□□□□□ -1.94
USP47-211ENST00000531513 SFXN3Q9BWM7 321 aa2.92□□□□□ -1.94
USP47-211ENST00000531513 ANGPTL4Q9BY76 406 aa2.92□□□□□ -1.94
USP47-211ENST00000531513 HDHD2Q9H0R4 259 aa2.92□□□□□ -1.94
USP47-211ENST00000531513 HEBP1Q9NRV9 189 aa2.92□□□□□ -1.94
USP47-211ENST00000531513 TMEM100Q9NV29 134 aa2.92□□□□□ -1.94
USP47-211ENST00000531513 RBAKQ9NYW8 714 aaPredicted RBP2.92□□□□□ -1.94
USP47-211ENST00000531513 SIGLEC7Q9Y286 467 aa2.92□□□□□ -1.94
USP47-211ENST00000531513 PRG3Q9Y2Y8 225 aaPredicted RBP2.92□□□□□ -1.94
USP47-211ENST00000531513 ATP6V1DQ9Y5K8 247 aa2.92□□□□□ -1.94
USP47-211ENST00000531513 ADAMTS13Q76LX8 1427 aa2.92□□□□□ -1.94
USP47-211ENST00000531513 TRBV6-6A0A0A6YYG2 114 aa2.91□□□□□ -1.94
USP47-211ENST00000531513 IGHV5-10-1A0A0J9YXX1 117 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms