RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 NPIPB7O75200 414 aa5.46□□□□□ -1.54
CSDE1-213ENST00000530784 ANP32DO95626 131 aa5.46□□□□□ -1.54
CSDE1-213ENST00000530784 IGHV3-13P01766 116 aa5.46□□□□□ -1.54
CSDE1-213ENST00000530784 TACSTD2P09758 323 aa5.46□□□□□ -1.54
CSDE1-213ENST00000530784 PNMTP11086 282 aa5.46□□□□□ -1.54
CSDE1-213ENST00000530784 PRG2P13727 222 aa5.46□□□□□ -1.54
CSDE1-213ENST00000530784 CBR1P16152 277 aa5.46□□□□□ -1.54
CSDE1-213ENST00000530784 ZNF43P17038 809 aa5.46□□□□□ -1.54
CSDE1-213ENST00000530784 BGNP21810 368 aa5.46□□□□□ -1.54
CSDE1-213ENST00000530784 PCMT1P22061 227 aa5.46□□□□□ -1.54
CSDE1-213ENST00000530784 IL12AP29459 219 aa5.46□□□□□ -1.54
CSDE1-213ENST00000530784 IL2RGP31785 369 aa5.46□□□□□ -1.54
CSDE1-213ENST00000530784 ARR3P36575 388 aa5.46□□□□□ -1.54
CSDE1-213ENST00000530784 ACAA2P42765 397 aaKnown RBP5.46□□□□□ -1.54
CSDE1-213ENST00000530784 CAPZA1P52907 286 aa5.46□□□□□ -1.54
CSDE1-213ENST00000530784 CLDN17P56750 224 aa5.46□□□□□ -1.54
CSDE1-213ENST00000530784 VSNL1P62760 191 aa5.46□□□□□ -1.54
CSDE1-213ENST00000530784 IL1RL1Q01638 556 aa5.46□□□□□ -1.54
CSDE1-213ENST00000530784 STX3Q13277 289 aa5.46□□□□□ -1.54
CSDE1-213ENST00000530784 SNTB2Q13425 540 aaKnown RBP5.46□□□□□ -1.54
CSDE1-213ENST00000530784 C1DQ13901 141 aaKnown RBP5.46□□□□□ -1.54
CSDE1-213ENST00000530784 MAPK11Q15759 364 aa5.46□□□□□ -1.54
CSDE1-213ENST00000530784 UGT2A3Q6UWM9 527 aa5.46□□□□□ -1.54
CSDE1-213ENST00000530784 GDPGP1Q6ZNW5 385 aa5.46□□□□□ -1.54
CSDE1-213ENST00000530784 MEX3DQ86XN8 651 aaKnown RBP5.46□□□□□ -1.54
CSDE1-213ENST00000530784 ZNF786Q8N393 782 aa5.46□□□□□ -1.54
CSDE1-213ENST00000530784 GPR137CQ8N3F9 429 aa5.46□□□□□ -1.54
CSDE1-213ENST00000530784 MFSD8Q8NHS3 518 aa5.46□□□□□ -1.54
CSDE1-213ENST00000530784 CKAP2Q8WWK9 683 aa5.46□□□□□ -1.54
CSDE1-213ENST00000530784 NSMAFQ92636 917 aa5.46□□□□□ -1.54
CSDE1-213ENST00000530784 SLC25A36Q96CQ1 311 aa5.46□□□□□ -1.54
CSDE1-213ENST00000530784 DOK1Q99704 481 aa5.46□□□□□ -1.54
CSDE1-213ENST00000530784 EGLN3Q9H6Z9 239 aa5.46□□□□□ -1.54
CSDE1-213ENST00000530784 CRLF2Q9HC73 371 aa5.46□□□□□ -1.54
CSDE1-213ENST00000530784 SH3PXD2BA1X283 911 aa5.45□□□□□ -1.54
CSDE1-213ENST00000530784 HTR3EA5X5Y0 456 aa5.45□□□□□ -1.54
CSDE1-213ENST00000530784 RPL36A-HNRNPH2H7BZ11 118 aa5.45□□□□□ -1.54
CSDE1-213ENST00000530784 SDHDO14521 159 aa5.45□□□□□ -1.54
CSDE1-213ENST00000530784 AIM2O14862 343 aa5.45□□□□□ -1.54
CSDE1-213ENST00000530784 SRSF10O75494 262 aaKnown RBP5.45□□□□□ -1.54
CSDE1-213ENST00000530784 IL6P05231 212 aa5.45□□□□□ -1.54
CSDE1-213ENST00000530784 ADRA2AP08913 450 aa5.45□□□□□ -1.54
CSDE1-213ENST00000530784 SPP1P10451 314 aa5.45□□□□□ -1.54
CSDE1-213ENST00000530784 IDO1P14902 403 aa5.45□□□□□ -1.54
CSDE1-213ENST00000530784 RPS5P46782 204 aaKnown RBP5.45□□□□□ -1.54
CSDE1-213ENST00000530784 DSTNP60981 165 aa5.45□□□□□ -1.54
CSDE1-213ENST00000530784 BST1Q10588 318 aa5.45□□□□□ -1.54
CSDE1-213ENST00000530784 TRIP10Q15642 601 aa5.45□□□□□ -1.54
CSDE1-213ENST00000530784 FAM189A2Q15884 450 aa5.45□□□□□ -1.54
CSDE1-213ENST00000530784 CEACAM16Q2WEN9 425 aa5.45□□□□□ -1.54
CSDE1-213ENST00000530784 ZNF311Q5JNZ3 666 aa5.45□□□□□ -1.54
CSDE1-213ENST00000530784 C12orf54Q6X4T0 127 aa5.45□□□□□ -1.54
CSDE1-213ENST00000530784 ZER1Q7Z7L7 766 aa5.45□□□□□ -1.54
CSDE1-213ENST00000530784 MDP1Q86V88 176 aa5.45□□□□□ -1.54
CSDE1-213ENST00000530784 CCDC36Q8IYA8 594 aa5.45□□□□□ -1.54
CSDE1-213ENST00000530784 ZCCHC24Q8N2G6 241 aaKnown RBP5.45□□□□□ -1.54
CSDE1-213ENST00000530784 KDM8Q8N371 416 aa5.45□□□□□ -1.54
CSDE1-213ENST00000530784 AENQ8WTP8 325 aaKnown RBP5.45□□□□□ -1.54
CSDE1-213ENST00000530784 TRIM44Q96DX7 344 aaPredicted RBP5.45□□□□□ -1.54
CSDE1-213ENST00000530784 OR2M2Q96R28 347 aa5.45□□□□□ -1.54
CSDE1-213ENST00000530784 TMEM109Q9BVC6 243 aa5.45□□□□□ -1.54
CSDE1-213ENST00000530784 TPK1Q9H3S4 243 aa5.45□□□□□ -1.54
CSDE1-213ENST00000530784 WDR55Q9H6Y2 383 aaPredicted RBP5.45□□□□□ -1.54
CSDE1-213ENST00000530784 RMND5AQ9H871 391 aa5.45□□□□□ -1.54
CSDE1-213ENST00000530784 TPT1P8Q9HAU6 139 aa5.45□□□□□ -1.54
CSDE1-213ENST00000530784 NOX3Q9HBY0 568 aa5.45□□□□□ -1.54
CSDE1-213ENST00000530784 THUMPD1Q9NXG2 353 aaKnown RBP5.45□□□□□ -1.54
CSDE1-213ENST00000530784 RPS6KB2Q9UBS0 482 aa5.45□□□□□ -1.54
CSDE1-213ENST00000530784 SEC14L4Q9UDX3 406 aa5.45□□□□□ -1.54
CSDE1-213ENST00000530784 IFT52Q9Y366 437 aa5.45□□□□□ -1.54
CSDE1-213ENST00000530784 SELENOKQ9Y6D0 94 aa5.45□□□□□ -1.54
CSDE1-213ENST00000530784 ABCA1O95477 2261 aa5.44□□□□□ -1.54
CSDE1-213ENST00000530784 TRPC5OSA6NMA1 111 aa5.44□□□□□ -1.54
CSDE1-213ENST00000530784 ZNF99A8MXY4 864 aaPredicted RBP5.44□□□□□ -1.54
CSDE1-213ENST00000530784 B4DSR2 109 aa5.44□□□□□ -1.54
CSDE1-213ENST00000530784 C5orf58C9J3I9 102 aa5.44□□□□□ -1.54
CSDE1-213ENST00000530784 LYNX1G3V0Z9 82 aa5.44□□□□□ -1.54
CSDE1-213ENST00000530784 M0R233 179 aa5.44□□□□□ -1.54
CSDE1-213ENST00000530784 M0R3G1 203 aa5.44□□□□□ -1.54
CSDE1-213ENST00000530784 HDAC3O15379 428 aa5.44□□□□□ -1.54
CSDE1-213ENST00000530784 TRAF3IP2O43734 574 aaPredicted RBP5.44□□□□□ -1.54
CSDE1-213ENST00000530784 OR2T1O43869 369 aa5.44□□□□□ -1.54
CSDE1-213ENST00000530784 ZCCHC18P0CG32 403 aa5.44□□□□□ -1.54
CSDE1-213ENST00000530784 LYNX1P0DP58 116 aa5.44□□□□□ -1.54
CSDE1-213ENST00000530784 CD79AP11912 226 aa5.44□□□□□ -1.54
CSDE1-213ENST00000530784 GRPRP30550 384 aa5.44□□□□□ -1.54
CSDE1-213ENST00000530784 CDX1P47902 265 aaPredicted RBP5.44□□□□□ -1.54
CSDE1-213ENST00000530784 HOXC5Q00444 222 aa5.44□□□□□ -1.54
CSDE1-213ENST00000530784 SCGB2A2Q13296 93 aa5.44□□□□□ -1.54
CSDE1-213ENST00000530784 GSG1Q2KHT4 349 aa5.44□□□□□ -1.54
CSDE1-213ENST00000530784 FREM1Q5H8C1 2179 aa5.44□□□□□ -1.54
CSDE1-213ENST00000530784 PRR14LQ5THK1 2151 aa5.44□□□□□ -1.54
CSDE1-213ENST00000530784 CARD17Q5XLA6 110 aa5.44□□□□□ -1.54
CSDE1-213ENST00000530784 FAM91A1Q658Y4 838 aa5.44□□□□□ -1.54
CSDE1-213ENST00000530784 SHQ1Q6PI26 577 aaKnown RBP5.44□□□□□ -1.54
CSDE1-213ENST00000530784 C5orf46Q6UWT4 87 aa5.44□□□□□ -1.54
CSDE1-213ENST00000530784 C6orf89Q6UWU4 347 aa5.44□□□□□ -1.54
CSDE1-213ENST00000530784 FAM219AQ8IW50 185 aa5.44□□□□□ -1.54
CSDE1-213ENST00000530784 TMEM123Q8N131 208 aa5.44□□□□□ -1.54
CSDE1-213ENST00000530784 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms