RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 MICU1Q9BPX6 476 aa19.25■□□□□ 0.67
CPSF1-202ENST00000527827 TSSK6Q9BXA6 273 aa19.25■□□□□ 0.67
CPSF1-202ENST00000527827 SP140LQ9H930 580 aa19.25■□□□□ 0.67
CPSF1-202ENST00000527827 TBC1D23Q9NUY8 699 aa19.25■□□□□ 0.67
CPSF1-202ENST00000527827 ZNF391Q9UJN7 358 aa19.25■□□□□ 0.67
CPSF1-202ENST00000527827 H3BUX3 64 aa19.24■□□□□ 0.67
CPSF1-202ENST00000527827 M0R1W7 72 aa19.24■□□□□ 0.67
CPSF1-202ENST00000527827 KRT36O76013 467 aa19.24■□□□□ 0.67
CPSF1-202ENST00000527827 CFL1P23528 166 aaKnown RBP19.24■□□□□ 0.67
CPSF1-202ENST00000527827 HSD11B1P28845 292 aa19.24■□□□□ 0.67
CPSF1-202ENST00000527827 ACSM1Q08AH1 577 aa19.24■□□□□ 0.67
CPSF1-202ENST00000527827 GFOD2Q3B7J2 385 aa19.24■□□□□ 0.67
CPSF1-202ENST00000527827 KPRPQ5T749 579 aaPredicted RBP19.24■□□□□ 0.67
CPSF1-202ENST00000527827 NCR3LG1Q68D85 454 aa19.24■□□□□ 0.67
CPSF1-202ENST00000527827 HCP5Q6MZN7 132 aa19.24■□□□□ 0.67
CPSF1-202ENST00000527827 CSNK2A3Q8NEV1 391 aa19.24■□□□□ 0.67
CPSF1-202ENST00000527827 OR52H1Q8NGJ2 320 aa19.24■□□□□ 0.67
CPSF1-202ENST00000527827 ANGPTL6Q8NI99 470 aa19.24■□□□□ 0.67
CPSF1-202ENST00000527827 C17orf50Q8WW18 174 aa19.24■□□□□ 0.67
CPSF1-202ENST00000527827 RPL3LQ92901 407 aaKnown RBP19.24■□□□□ 0.67
CPSF1-202ENST00000527827 AMELYQ99218 206 aa19.24■□□□□ 0.67
CPSF1-202ENST00000527827 ABHD6Q9BV23 337 aa19.24■□□□□ 0.67
CPSF1-202ENST00000527827 FGF23Q9GZV9 251 aaPredicted RBP19.24■□□□□ 0.67
CPSF1-202ENST00000527827 METTL8Q9H825 291 aaKnown RBP19.24■□□□□ 0.67
CPSF1-202ENST00000527827 DNAJC27Q9NZQ0 273 aa19.24■□□□□ 0.67
CPSF1-202ENST00000527827 SLC25A10Q9UBX3 287 aaPredicted RBP19.24■□□□□ 0.67
CPSF1-202ENST00000527827 NKX6-3A6NJ46 265 aa19.23■□□□□ 0.67
CPSF1-202ENST00000527827 OPN1MWP04001 364 aa19.23■□□□□ 0.67
CPSF1-202ENST00000527827 OPN1MW2P0DN77 364 aa19.23■□□□□ 0.67
CPSF1-202ENST00000527827 OPN1MW3P0DN78 364 aa19.23■□□□□ 0.67
CPSF1-202ENST00000527827 EFNB2P52799 333 aa19.23■□□□□ 0.67
CPSF1-202ENST00000527827 IL5RAQ01344 420 aa19.23■□□□□ 0.67
CPSF1-202ENST00000527827 SAMD5Q5TGI4 173 aa19.23■□□□□ 0.67
CPSF1-202ENST00000527827 Q6ZTK2 550 aa19.23■□□□□ 0.67
CPSF1-202ENST00000527827 LINC00471Q8N535 108 aa19.23■□□□□ 0.67
CPSF1-202ENST00000527827 MED30Q96HR3 178 aa19.23■□□□□ 0.67
CPSF1-202ENST00000527827 AJUBAQ96IF1 538 aa19.23■□□□□ 0.67
CPSF1-202ENST00000527827 RTL8AQ9BWD3 113 aa19.23■□□□□ 0.67
CPSF1-202ENST00000527827 OR10A2Q9H208 303 aa19.23■□□□□ 0.67
CPSF1-202ENST00000527827 ANXA2P2A6NMY6 339 aa19.22■□□□□ 0.67
CPSF1-202ENST00000527827 TNFRSF11BO00300 401 aa19.22■□□□□ 0.67
CPSF1-202ENST00000527827 AKR7A2O43488 359 aa19.22■□□□□ 0.67
CPSF1-202ENST00000527827 APOC1P02654 83 aa19.22■□□□□ 0.67
CPSF1-202ENST00000527827 ACKR3P25106 362 aa19.22■□□□□ 0.67
CPSF1-202ENST00000527827 OR5P3Q8WZ94 311 aa19.22■□□□□ 0.67
CPSF1-202ENST00000527827 DUS3LQ96G46 650 aaKnown RBP19.22■□□□□ 0.67
CPSF1-202ENST00000527827 SSX3Q99909 188 aa19.22■□□□□ 0.67
CPSF1-202ENST00000527827 BRD7Q9NPI1 651 aa19.22■□□□□ 0.67
CPSF1-202ENST00000527827 FOXJ3Q9UPW0 622 aa19.22■□□□□ 0.67
CPSF1-202ENST00000527827 BAIAP2Q9UQB8 552 aa19.22■□□□□ 0.67
CPSF1-202ENST00000527827 ZNF281Q9Y2X9 895 aa19.22■□□□□ 0.67
CPSF1-202ENST00000527827 MPC1Q9Y5U8 109 aa19.22■□□□□ 0.67
CPSF1-202ENST00000527827 A0A1W2PQ09 198 aa19.21■□□□□ 0.67
CPSF1-202ENST00000527827 ZNF850A8MQ14 1090 aa19.21■□□□□ 0.67
CPSF1-202ENST00000527827 SIGLEC5O15389 551 aa19.21■□□□□ 0.67
CPSF1-202ENST00000527827 PRB2P02812 416 aaPredicted RBP19.21■□□□□ 0.67
CPSF1-202ENST00000527827 ACAA1P09110 424 aaPredicted RBP19.21■□□□□ 0.67
CPSF1-202ENST00000527827 NDUFB7P17568 137 aa19.21■□□□□ 0.67
CPSF1-202ENST00000527827 OPRL1P41146 370 aa19.21■□□□□ 0.67
CPSF1-202ENST00000527827 KIR2DS4P43632 304 aa19.21■□□□□ 0.67
CPSF1-202ENST00000527827 BLVRAP53004 296 aa19.21■□□□□ 0.67
CPSF1-202ENST00000527827 CAV3P56539 151 aa19.21■□□□□ 0.67
CPSF1-202ENST00000527827 PRDX4Q13162 271 aa19.21■□□□□ 0.67
CPSF1-202ENST00000527827 FAM76BQ5HYJ3 339 aa19.21■□□□□ 0.67
CPSF1-202ENST00000527827 ERI1Q8IV48 349 aaKnown RBP19.21■□□□□ 0.67
CPSF1-202ENST00000527827 C11orf44Q8N8P7 122 aa19.21■□□□□ 0.67
CPSF1-202ENST00000527827 OR6N2Q8NGY6 317 aa19.21■□□□□ 0.67
CPSF1-202ENST00000527827 CFHR4Q92496 578 aa19.21■□□□□ 0.67
CPSF1-202ENST00000527827 RORBQ92753 470 aa19.21■□□□□ 0.67
CPSF1-202ENST00000527827 RGCCQ9H4X1 137 aa19.21■□□□□ 0.67
CPSF1-202ENST00000527827 ELL3Q9HB65 397 aaPredicted RBP19.21■□□□□ 0.67
CPSF1-202ENST00000527827 ARMC1Q9NVT9 282 aa19.21■□□□□ 0.67
CPSF1-202ENST00000527827 ZNF446Q9NWS9 450 aa19.21■□□□□ 0.67
CPSF1-202ENST00000527827 MAB21L2Q9Y586 359 aa19.21■□□□□ 0.67
CPSF1-202ENST00000527827 TMEM210A6NLX4 147 aa19.2■□□□□ 0.66
CPSF1-202ENST00000527827 CCNB2O95067 398 aa19.2■□□□□ 0.66
CPSF1-202ENST00000527827 SOX14O95416 240 aa19.2■□□□□ 0.66
CPSF1-202ENST00000527827 DCTDP32321 178 aa19.2■□□□□ 0.66
CPSF1-202ENST00000527827 PPP1R8Q12972 351 aaKnown RBP19.2■□□□□ 0.66
CPSF1-202ENST00000527827 SNCBQ16143 134 aa19.2■□□□□ 0.66
CPSF1-202ENST00000527827 LY6EQ16553 131 aa19.2■□□□□ 0.66
CPSF1-202ENST00000527827 SAMD4BQ5PRF9 694 aaKnown RBP19.2■□□□□ 0.66
CPSF1-202ENST00000527827 CRIP3Q6Q6R5 217 aa19.2■□□□□ 0.66
CPSF1-202ENST00000527827 Q6ZPA2 131 aa19.2■□□□□ 0.66
CPSF1-202ENST00000527827 PGAM4Q8N0Y7 254 aa19.2■□□□□ 0.66
CPSF1-202ENST00000527827 AQP11Q8NBQ7 271 aa19.2■□□□□ 0.66
CPSF1-202ENST00000527827 OR2T33Q8NG76 320 aa19.2■□□□□ 0.66
CPSF1-202ENST00000527827 HPSE2Q8WWQ2 592 aa19.2■□□□□ 0.66
CPSF1-202ENST00000527827 PGAM5Q96HS1 289 aa19.2■□□□□ 0.66
CPSF1-202ENST00000527827 INTS14Q96SY0 518 aa19.2■□□□□ 0.66
CPSF1-202ENST00000527827 CDRT15Q96T59 188 aa19.2■□□□□ 0.66
CPSF1-202ENST00000527827 ELAC2Q9BQ52 826 aaKnown RBP19.2■□□□□ 0.66
CPSF1-202ENST00000527827 MED20Q9H944 212 aa19.2■□□□□ 0.66
CPSF1-202ENST00000527827 NOTCH3Q9UM47 2321 aa19.2■□□□□ 0.66
CPSF1-202ENST00000527827 CST4P01036 141 aa19.19■□□□□ 0.66
CPSF1-202ENST00000527827 POU1F1P28069 291 aa19.19■□□□□ 0.66
CPSF1-202ENST00000527827 BLMHQ13867 455 aa19.19■□□□□ 0.66
CPSF1-202ENST00000527827 C11orf88Q6PI97 169 aa19.19■□□□□ 0.66
CPSF1-202ENST00000527827 FTMTQ8N4E7 242 aa19.19■□□□□ 0.66
CPSF1-202ENST00000527827 RNF170Q96K19 258 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms