RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 NDUFA2O43678 99 aa11.65□□□□□ -0.54
CPSF1-201ENST00000526271 ECDO95905 644 aaPredicted RBP11.65□□□□□ -0.54
CPSF1-201ENST00000526271 RENP00797 406 aa11.65□□□□□ -0.54
CPSF1-201ENST00000526271 NOS3P29474 1203 aa11.65□□□□□ -0.54
CPSF1-201ENST00000526271 DGUOKQ16854 277 aa11.65□□□□□ -0.54
CPSF1-201ENST00000526271 STUMQ69YW2 141 aa11.65□□□□□ -0.54
CPSF1-201ENST00000526271 DHRS7BQ6IAN0 325 aaPredicted RBP11.65□□□□□ -0.54
CPSF1-201ENST00000526271 DRAM2Q6UX65 266 aa11.65□□□□□ -0.54
CPSF1-201ENST00000526271 GDPGP1Q6ZNW5 385 aa11.65□□□□□ -0.54
CPSF1-201ENST00000526271 SLC16A9Q7RTY1 509 aa11.65□□□□□ -0.54
CPSF1-201ENST00000526271 DCXRQ7Z4W1 244 aa11.65□□□□□ -0.54
CPSF1-201ENST00000526271 AMIGO2Q86SJ2 522 aa11.65□□□□□ -0.54
CPSF1-201ENST00000526271 C11orf44Q8N8P7 122 aa11.65□□□□□ -0.54
CPSF1-201ENST00000526271 ZNF511Q8NB15 262 aa11.65□□□□□ -0.54
CPSF1-201ENST00000526271 OR1M1Q8NGA1 313 aa11.65□□□□□ -0.54
CPSF1-201ENST00000526271 OR5T2Q8NGG2 359 aa11.65□□□□□ -0.54
CPSF1-201ENST00000526271 OR2AJ1Q8NGZ0 328 aa11.65□□□□□ -0.54
CPSF1-201ENST00000526271 OR5K1Q8NHB7 308 aa11.65□□□□□ -0.54
CPSF1-201ENST00000526271 C8orf46Q8TAG6 207 aa11.65□□□□□ -0.54
CPSF1-201ENST00000526271 CFHR4Q92496 578 aa11.65□□□□□ -0.54
CPSF1-201ENST00000526271 AMELYQ99218 206 aa11.65□□□□□ -0.54
CPSF1-201ENST00000526271 DCTN5Q9BTE1 182 aa11.65□□□□□ -0.54
CPSF1-201ENST00000526271 IFT27Q9BW83 186 aa11.65□□□□□ -0.54
CPSF1-201ENST00000526271 TOR3AQ9H497 397 aa11.65□□□□□ -0.54
CPSF1-201ENST00000526271 ONECUT1Q9UBC0 465 aa11.65□□□□□ -0.54
CPSF1-201ENST00000526271 hCG_38984A0A1B0GV85 526 aa11.64□□□□□ -0.55
CPSF1-201ENST00000526271 hCG_1807616A0A1W2PRN6 198 aa11.64□□□□□ -0.55
CPSF1-201ENST00000526271 ARRDC5A6NEK1 342 aa11.64□□□□□ -0.55
CPSF1-201ENST00000526271 CCNB2O95067 398 aa11.64□□□□□ -0.55
CPSF1-201ENST00000526271 GASTP01350 101 aa11.64□□□□□ -0.55
CPSF1-201ENST00000526271 CSF1P09603 554 aa11.64□□□□□ -0.55
CPSF1-201ENST00000526271 CLUP10909 449 aa11.64□□□□□ -0.55
CPSF1-201ENST00000526271 SAA4P35542 130 aa11.64□□□□□ -0.55
CPSF1-201ENST00000526271 IKZF1Q13422 519 aa11.64□□□□□ -0.55
CPSF1-201ENST00000526271 KCNJ8Q15842 424 aa11.64□□□□□ -0.55
CPSF1-201ENST00000526271 C2orf68Q2NKX9 166 aa11.64□□□□□ -0.55
CPSF1-201ENST00000526271 C11orf91Q3C1V1 193 aa11.64□□□□□ -0.55
CPSF1-201ENST00000526271 SLC36A3Q495N2 470 aa11.64□□□□□ -0.55
CPSF1-201ENST00000526271 LINC01590Q5TEZ4 76 aa11.64□□□□□ -0.55
CPSF1-201ENST00000526271 PGBD2Q6P3X8 592 aa11.64□□□□□ -0.55
CPSF1-201ENST00000526271 C1orf122Q6ZSJ8 110 aa11.64□□□□□ -0.55
CPSF1-201ENST00000526271 PQLC1Q8N2U9 271 aa11.64□□□□□ -0.55
CPSF1-201ENST00000526271 OR9Q1Q8NGQ5 310 aa11.64□□□□□ -0.55
CPSF1-201ENST00000526271 GIPC3Q8TF64 312 aa11.64□□□□□ -0.55
CPSF1-201ENST00000526271 RORBQ92753 470 aa11.64□□□□□ -0.55
CPSF1-201ENST00000526271 ITPKCQ96DU7 683 aa11.64□□□□□ -0.55
CPSF1-201ENST00000526271 GAFA1Q96PS6 74 aa11.64□□□□□ -0.55
CPSF1-201ENST00000526271 NMNAT2Q9BZQ4 307 aa11.64□□□□□ -0.55
CPSF1-201ENST00000526271 DPAGT1Q9H3H5 408 aa11.64□□□□□ -0.55
CPSF1-201ENST00000526271 DCLRE1BQ9H816 532 aa11.64□□□□□ -0.55
CPSF1-201ENST00000526271 RNPEPL1Q9HAU8 725 aa11.64□□□□□ -0.55
CPSF1-201ENST00000526271 ELL3Q9HB65 397 aaPredicted RBP11.64□□□□□ -0.55
CPSF1-201ENST00000526271 SNTG1Q9NSN8 517 aa11.64□□□□□ -0.55
CPSF1-201ENST00000526271 FBLN5Q9UBX5 448 aa11.64□□□□□ -0.55
CPSF1-201ENST00000526271 HLA-DQA2P01906 255 aa11.63□□□□□ -0.55
CPSF1-201ENST00000526271 OPN1MWP04001 364 aa11.63□□□□□ -0.55
CPSF1-201ENST00000526271 GYPBP06028 91 aa11.63□□□□□ -0.55
CPSF1-201ENST00000526271 OPN1MW2P0DN77 364 aa11.63□□□□□ -0.55
CPSF1-201ENST00000526271 OPN1MW3P0DN78 364 aa11.63□□□□□ -0.55
CPSF1-201ENST00000526271 MUC1P15941 1255 aaPredicted RBP11.63□□□□□ -0.55
CPSF1-201ENST00000526271 ACKR3P25106 362 aa11.63□□□□□ -0.55
CPSF1-201ENST00000526271 IFNGR2P38484 337 aa11.63□□□□□ -0.55
CPSF1-201ENST00000526271 ATPAF1Q5TC12 328 aaPredicted RBP11.63□□□□□ -0.55
CPSF1-201ENST00000526271 ZNF788Q6ZQV5 615 aa11.63□□□□□ -0.55
CPSF1-201ENST00000526271 SLC37A3Q8NCC5 494 aa11.63□□□□□ -0.55
CPSF1-201ENST00000526271 OR4Q3Q8NH05 313 aa11.63□□□□□ -0.55
CPSF1-201ENST00000526271 PIFOQ8TCI5 191 aa11.63□□□□□ -0.55
CPSF1-201ENST00000526271 GNPDA2Q8TDQ7 276 aa11.63□□□□□ -0.55
CPSF1-201ENST00000526271 SPTSSAQ969W0 71 aa11.63□□□□□ -0.55
CPSF1-201ENST00000526271 SLAMF6Q96DU3 332 aa11.63□□□□□ -0.55
CPSF1-201ENST00000526271 KCNJ15Q99712 375 aa11.63□□□□□ -0.55
CPSF1-201ENST00000526271 DGCR6LQ9BY27 220 aa11.63□□□□□ -0.55
CPSF1-201ENST00000526271 PPA2Q9H2U2 334 aa11.63□□□□□ -0.55
CPSF1-201ENST00000526271 KIF17Q9P2E2 1029 aa11.63□□□□□ -0.55
CPSF1-201ENST00000526271 KCNG2Q9UJ96 466 aa11.63□□□□□ -0.55
CPSF1-201ENST00000526271 RRP15Q9Y3B9 282 aaKnown RBP11.63□□□□□ -0.55
CPSF1-201ENST00000526271 RHBDD3Q9Y3P4 386 aa11.63□□□□□ -0.55
CPSF1-201ENST00000526271 N6AMT1Q9Y5N5 214 aa11.63□□□□□ -0.55
CPSF1-201ENST00000526271 ADARB2-AS1A8MUL3 147 aa11.62□□□□□ -0.55
CPSF1-201ENST00000526271 G3V2T6 193 aa11.62□□□□□ -0.55
CPSF1-201ENST00000526271 H0YHG0 523 aa11.62□□□□□ -0.55
CPSF1-201ENST00000526271 CDIPTO14735 213 aa11.62□□□□□ -0.55
CPSF1-201ENST00000526271 GPR37O15354 613 aa11.62□□□□□ -0.55
CPSF1-201ENST00000526271 CHST1O43916 411 aa11.62□□□□□ -0.55
CPSF1-201ENST00000526271 E2F6O75461 281 aa11.62□□□□□ -0.55
CPSF1-201ENST00000526271 BAG2O95816 211 aa11.62□□□□□ -0.55
CPSF1-201ENST00000526271 FBP1P09467 338 aa11.62□□□□□ -0.55
CPSF1-201ENST00000526271 TGFBR2P37173 567 aa11.62□□□□□ -0.55
CPSF1-201ENST00000526271 TSPAN31Q12999 210 aa11.62□□□□□ -0.55
CPSF1-201ENST00000526271 RIPK1Q13546 671 aa11.62□□□□□ -0.55
CPSF1-201ENST00000526271 HERPUD1Q15011 391 aa11.62□□□□□ -0.55
CPSF1-201ENST00000526271 RCN1Q15293 331 aa11.62□□□□□ -0.55
CPSF1-201ENST00000526271 CD300LDQ6UXZ3 194 aa11.62□□□□□ -0.55
CPSF1-201ENST00000526271 HS3ST5Q8IZT8 346 aa11.62□□□□□ -0.55
CPSF1-201ENST00000526271 LYG1Q8N1E2 194 aa11.62□□□□□ -0.55
CPSF1-201ENST00000526271 C11orf42Q8N5U0 333 aa11.62□□□□□ -0.55
CPSF1-201ENST00000526271 SPERTQ8NA61 448 aa11.62□□□□□ -0.55
CPSF1-201ENST00000526271 OR10G2Q8NGC3 310 aa11.62□□□□□ -0.55
CPSF1-201ENST00000526271 OR9Q2Q8NGE9 314 aa11.62□□□□□ -0.55
CPSF1-201ENST00000526271 WIPF2Q8TF74 440 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms