RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 PLPP3O14495 311 aa5.94□□□□□ -1.46
CPNE3-203ENST00000517490 HPNP05981 417 aa5.94□□□□□ -1.46
CPNE3-203ENST00000517490 HEXAP06865 529 aa5.94□□□□□ -1.46
CPNE3-203ENST00000517490 SEC11BP0C7V7 166 aa5.94□□□□□ -1.46
CPNE3-203ENST00000517490 CT45A8P0DMV1 189 aa5.94□□□□□ -1.46
CPNE3-203ENST00000517490 CT45A9P0DMV2 189 aa5.94□□□□□ -1.46
CPNE3-203ENST00000517490 MSX1P28360 303 aa5.94□□□□□ -1.46
CPNE3-203ENST00000517490 CD81P60033 236 aa5.94□□□□□ -1.46
CPNE3-203ENST00000517490 FAM3AP98173 230 aa5.94□□□□□ -1.46
CPNE3-203ENST00000517490 LINC01559Q495D7 138 aa5.94□□□□□ -1.46
CPNE3-203ENST00000517490 CT45A2Q5DJT8 189 aa5.94□□□□□ -1.46
CPNE3-203ENST00000517490 PDZD11Q5EBL8 140 aa5.94□□□□□ -1.46
CPNE3-203ENST00000517490 GGNBP1Q5YKI7 109 aa5.94□□□□□ -1.46
CPNE3-203ENST00000517490 OR13H1Q8NG92 308 aa5.94□□□□□ -1.46
CPNE3-203ENST00000517490 PIGTQ969N2 578 aa5.94□□□□□ -1.46
CPNE3-203ENST00000517490 EMC6Q9BV81 110 aa5.94□□□□□ -1.46
CPNE3-203ENST00000517490 MED29Q9NX70 200 aa5.94□□□□□ -1.46
CPNE3-203ENST00000517490 METTL1Q9UBP6 276 aaKnown RBP5.94□□□□□ -1.46
CPNE3-203ENST00000517490 PIGLQ9Y2B2 252 aa5.94□□□□□ -1.46
CPNE3-203ENST00000517490 DOCK3Q8IZD9 2030 aa5.94□□□□□ -1.46
CPNE3-203ENST00000517490 FGF16O43320 207 aa5.94□□□□□ -1.46
CPNE3-203ENST00000517490 KCNAB3O43448 404 aa5.94□□□□□ -1.46
CPNE3-203ENST00000517490 XRCC2O43543 280 aa5.94□□□□□ -1.46
CPNE3-203ENST00000517490 BGLAPP02818 100 aa5.94□□□□□ -1.46
CPNE3-203ENST00000517490 EPHA1P21709 976 aa5.94□□□□□ -1.46
CPNE3-203ENST00000517490 CSNK1EP49674 416 aaKnown RBP5.94□□□□□ -1.46
CPNE3-203ENST00000517490 RPP30P78346 268 aaKnown RBP5.94□□□□□ -1.46
CPNE3-203ENST00000517490 FUT7Q11130 342 aa5.94□□□□□ -1.46
CPNE3-203ENST00000517490 ECH1Q13011 328 aa5.94□□□□□ -1.46
CPNE3-203ENST00000517490 IL13RA2Q14627 380 aa5.94□□□□□ -1.46
CPNE3-203ENST00000517490 NR0B2Q15466 257 aa5.94□□□□□ -1.46
CPNE3-203ENST00000517490 SMAD2Q15796 467 aaKnown RBP5.94□□□□□ -1.46
CPNE3-203ENST00000517490 NCMAPQ5T1S8 102 aa5.94□□□□□ -1.46
CPNE3-203ENST00000517490 ZNF429Q86V71 674 aa5.94□□□□□ -1.46
CPNE3-203ENST00000517490 MRPL41Q8IXM3 137 aaKnown RBP5.94□□□□□ -1.46
CPNE3-203ENST00000517490 STT3BQ8TCJ2 826 aa5.94□□□□□ -1.46
CPNE3-203ENST00000517490 CTHRC1Q96CG8 243 aa5.94□□□□□ -1.46
CPNE3-203ENST00000517490 BTF3L4Q96K17 158 aa5.94□□□□□ -1.46
CPNE3-203ENST00000517490 RSPO3Q9BXY4 272 aaPredicted RBP5.94□□□□□ -1.46
CPNE3-203ENST00000517490 SLC26A1Q9H2B4 701 aa5.94□□□□□ -1.46
CPNE3-203ENST00000517490 SMDT1Q9H4I9 107 aa5.94□□□□□ -1.46
CPNE3-203ENST00000517490 PCOLCE2Q9UKZ9 415 aa5.94□□□□□ -1.46
CPNE3-203ENST00000517490 CD300LBA8K4G0 201 aa5.93□□□□□ -1.46
CPNE3-203ENST00000517490 ARG1P05089 322 aa5.93□□□□□ -1.46
CPNE3-203ENST00000517490 CTSDP07339 412 aaPredicted RBP5.93□□□□□ -1.46
CPNE3-203ENST00000517490 HLA-GP17693 338 aa5.93□□□□□ -1.46
CPNE3-203ENST00000517490 GPR3P46089 330 aa5.93□□□□□ -1.46
CPNE3-203ENST00000517490 ZNF121P58317 390 aaPredicted RBP5.93□□□□□ -1.46
CPNE3-203ENST00000517490 RAB11AP62491 216 aa5.93□□□□□ -1.46
CPNE3-203ENST00000517490 MRPS21P82921 87 aaKnown RBP5.93□□□□□ -1.46
CPNE3-203ENST00000517490 CLEC9AQ6UXN8 241 aa5.93□□□□□ -1.46
CPNE3-203ENST00000517490 LINC00114Q6XXX2 140 aa5.93□□□□□ -1.46
CPNE3-203ENST00000517490 ZFP62Q8NB50 900 aaPredicted RBP5.93□□□□□ -1.46
CPNE3-203ENST00000517490 UBAC2Q8NBM4 344 aa5.93□□□□□ -1.46
CPNE3-203ENST00000517490 HIST1H2BAQ96A08 127 aa5.93□□□□□ -1.46
CPNE3-203ENST00000517490 RAB33BQ9H082 229 aa5.93□□□□□ -1.46
CPNE3-203ENST00000517490 C8orf33Q9H7E9 229 aaPredicted RBP5.93□□□□□ -1.46
CPNE3-203ENST00000517490 BCO1Q9HAY6 547 aa5.93□□□□□ -1.46
CPNE3-203ENST00000517490 OR5AC2Q9NZP5 309 aa5.93□□□□□ -1.46
CPNE3-203ENST00000517490 GPR132Q9UNW8 380 aa5.93□□□□□ -1.46
CPNE3-203ENST00000517490 MMP24Q9Y5R2 645 aa5.93□□□□□ -1.46
CPNE3-203ENST00000517490 ABHD16AO95870 558 aa5.93□□□□□ -1.46
CPNE3-203ENST00000517490 ACTL6AO96019 429 aa5.93□□□□□ -1.46
CPNE3-203ENST00000517490 PF4P02776 101 aa5.93□□□□□ -1.46
CPNE3-203ENST00000517490 CD79AP11912 226 aa5.93□□□□□ -1.46
CPNE3-203ENST00000517490 GALNSP34059 522 aa5.93□□□□□ -1.46
CPNE3-203ENST00000517490 THBS4P35443 961 aa5.93□□□□□ -1.46
CPNE3-203ENST00000517490 MMP16P51512 607 aa5.93□□□□□ -1.46
CPNE3-203ENST00000517490 RAB4BP61018 213 aa5.93□□□□□ -1.46
CPNE3-203ENST00000517490 KCNIP4Q6PIL6 250 aa5.93□□□□□ -1.46
CPNE3-203ENST00000517490 DPPA2Q7Z7J5 298 aa5.93□□□□□ -1.46
CPNE3-203ENST00000517490 ZSCAN4Q8NAM6 433 aaPredicted RBP5.93□□□□□ -1.46
CPNE3-203ENST00000517490 PHOSPHO2Q8TCD6 241 aa5.93□□□□□ -1.46
CPNE3-203ENST00000517490 ZNRF4Q8WWF5 429 aa5.93□□□□□ -1.46
CPNE3-203ENST00000517490 LIPHQ8WWY8 451 aa5.93□□□□□ -1.46
CPNE3-203ENST00000517490 NINJ1Q92982 152 aa5.93□□□□□ -1.46
CPNE3-203ENST00000517490 RBMXL1Q96E39 390 aaKnown RBP5.93□□□□□ -1.46
CPNE3-203ENST00000517490 AMELYQ99218 206 aa5.93□□□□□ -1.46
CPNE3-203ENST00000517490 TIMP4Q99727 224 aa5.93□□□□□ -1.46
CPNE3-203ENST00000517490 PIGQQ9BRB3 760 aa5.93□□□□□ -1.46
CPNE3-203ENST00000517490 RCL1Q9Y2P8 373 aaKnown RBP5.93□□□□□ -1.46
CPNE3-203ENST00000517490 PIAS3Q9Y6X2 628 aa5.93□□□□□ -1.46
CPNE3-203ENST00000517490 LINC01553A4QN01 128 aa5.93□□□□□ -1.46
CPNE3-203ENST00000517490 OR2W5A6NFC9 320 aa5.93□□□□□ -1.46
CPNE3-203ENST00000517490 SCGB2A1O75556 95 aa5.93□□□□□ -1.46
CPNE3-203ENST00000517490 DAOP14920 347 aa5.93□□□□□ -1.46
CPNE3-203ENST00000517490 CLDN17P56750 224 aa5.93□□□□□ -1.46
CPNE3-203ENST00000517490 RPS18P62269 152 aaKnown RBP5.93□□□□□ -1.46
CPNE3-203ENST00000517490 POLR2GP62487 172 aaKnown RBP eCLIP5.93□□□□□ -1.46
CPNE3-203ENST00000517490 MGAT2Q10469 447 aa5.93□□□□□ -1.46
CPNE3-203ENST00000517490 C9orf152Q5JTZ5 239 aa5.93□□□□□ -1.46
CPNE3-203ENST00000517490 RAET1LQ5VY80 246 aa5.93□□□□□ -1.46
CPNE3-203ENST00000517490 NSUN5P2Q63ZY6 315 aa5.93□□□□□ -1.46
CPNE3-203ENST00000517490 GPR137CQ8N3F9 429 aa5.93□□□□□ -1.46
CPNE3-203ENST00000517490 GSN-AS1Q9NRJ2 163 aa5.93□□□□□ -1.46
CPNE3-203ENST00000517490 PILRAQ9UKJ1 303 aa5.93□□□□□ -1.46
CPNE3-203ENST00000517490 ZNF705FA8MVS1 300 aaPredicted RBP5.93□□□□□ -1.46
CPNE3-203ENST00000517490 HRKO00198 91 aa5.93□□□□□ -1.46
CPNE3-203ENST00000517490 MPZL1O95297 269 aa5.93□□□□□ -1.46
CPNE3-203ENST00000517490 ISG15P05161 165 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms