RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 TRBV5-5A0A0J9YX44 114 aa8.67□□□□□ -1.02
NEDD9-214ENST00000513989 H3BSH0 61 aa8.67□□□□□ -1.02
NEDD9-214ENST00000513989 SMIM18P0DKX4 95 aa8.67□□□□□ -1.02
NEDD9-214ENST00000513989 PRKACBP22694 351 aa8.67□□□□□ -1.02
NEDD9-214ENST00000513989 CA6P23280 308 aa8.67□□□□□ -1.02
NEDD9-214ENST00000513989 SOX2P48431 317 aa8.67□□□□□ -1.02
NEDD9-214ENST00000513989 OR8G1Q15617 311 aa8.67□□□□□ -1.02
NEDD9-214ENST00000513989 SWI5Q1ZZU3 235 aa8.67□□□□□ -1.02
NEDD9-214ENST00000513989 GDPGP1Q6ZNW5 385 aa8.67□□□□□ -1.02
NEDD9-214ENST00000513989 MOB3CQ70IA8 216 aa8.67□□□□□ -1.02
NEDD9-214ENST00000513989 ZDHHC23Q8IYP9 409 aa8.67□□□□□ -1.02
NEDD9-214ENST00000513989 PARP16Q8N5Y8 322 aa8.67□□□□□ -1.02
NEDD9-214ENST00000513989 TMEM106AQ96A25 262 aa8.67□□□□□ -1.02
NEDD9-214ENST00000513989 CPNE2Q96FN4 548 aaPredicted RBP8.67□□□□□ -1.02
NEDD9-214ENST00000513989 FOXC2Q99958 501 aa8.67□□□□□ -1.02
NEDD9-214ENST00000513989 MICU1Q9BPX6 476 aa8.67□□□□□ -1.02
NEDD9-214ENST00000513989 SLC30A2Q9BRI3 323 aa8.67□□□□□ -1.02
NEDD9-214ENST00000513989 ZCCHC4Q9H5U6 513 aa8.67□□□□□ -1.02
NEDD9-214ENST00000513989 C14orf119Q9NWQ9 140 aa8.67□□□□□ -1.02
NEDD9-214ENST00000513989 STUB1Q9UNE7 303 aa8.67□□□□□ -1.02
NEDD9-214ENST00000513989 DSCAMO60469 2012 aa8.66□□□□□ -1.02
NEDD9-214ENST00000513989 TRDV1A0A1B0GX56 115 aa8.66□□□□□ -1.02
NEDD9-214ENST00000513989 MEGF11A6BM72 1044 aa8.66□□□□□ -1.02
NEDD9-214ENST00000513989 ANKRD61A6NGH8 418 aa8.66□□□□□ -1.02
NEDD9-214ENST00000513989 ZNF850A8MQ14 1090 aa8.66□□□□□ -1.02
NEDD9-214ENST00000513989 TPD52L2O43399 206 aaKnown RBP8.66□□□□□ -1.02
NEDD9-214ENST00000513989 SPRY3O43610 288 aa8.66□□□□□ -1.02
NEDD9-214ENST00000513989 NOL3O60936 208 aaKnown RBP8.66□□□□□ -1.02
NEDD9-214ENST00000513989 ALX3O95076 343 aa8.66□□□□□ -1.02
NEDD9-214ENST00000513989 TFAP2AP05549 437 aa8.66□□□□□ -1.02
NEDD9-214ENST00000513989 NAT2P11245 290 aa8.66□□□□□ -1.02
NEDD9-214ENST00000513989 FAHP16930 419 aa8.66□□□□□ -1.02
NEDD9-214ENST00000513989 HOXB4P17483 251 aaPredicted RBP8.66□□□□□ -1.02
NEDD9-214ENST00000513989 TNFRSF1AP19438 455 aa8.66□□□□□ -1.02
NEDD9-214ENST00000513989 RAB3AP20336 220 aa8.66□□□□□ -1.02
NEDD9-214ENST00000513989 ACKR3P25106 362 aa8.66□□□□□ -1.02
NEDD9-214ENST00000513989 TGFBR2P37173 567 aa8.66□□□□□ -1.02
NEDD9-214ENST00000513989 ALDH3B1P43353 468 aa8.66□□□□□ -1.02
NEDD9-214ENST00000513989 SRP9P49458 86 aaKnown RBP8.66□□□□□ -1.02
NEDD9-214ENST00000513989 PSMD7P51665 324 aa8.66□□□□□ -1.02
NEDD9-214ENST00000513989 FUT6P51993 359 aa8.66□□□□□ -1.02
NEDD9-214ENST00000513989 GP2P55259 537 aaKnown RBP8.66□□□□□ -1.02
NEDD9-214ENST00000513989 RPS11P62280 158 aaKnown RBP eCLIP8.66□□□□□ -1.02
NEDD9-214ENST00000513989 RPS25P62851 125 aaKnown RBP8.66□□□□□ -1.02
NEDD9-214ENST00000513989 DOC2BQ14184 412 aa8.66□□□□□ -1.02
NEDD9-214ENST00000513989 CNN3Q15417 329 aaKnown RBP8.66□□□□□ -1.02
NEDD9-214ENST00000513989 SSX1Q16384 188 aa8.66□□□□□ -1.02
NEDD9-214ENST00000513989 MST1LQ2TV78 715 aa8.66□□□□□ -1.02
NEDD9-214ENST00000513989 CEACAM21Q3KPI0 293 aa8.66□□□□□ -1.02
NEDD9-214ENST00000513989 ALKBH6Q3KRA9 238 aa8.66□□□□□ -1.02
NEDD9-214ENST00000513989 HSD17B12Q53GQ0 312 aa8.66□□□□□ -1.02
NEDD9-214ENST00000513989 PLCXD3Q63HM9 321 aa8.66□□□□□ -1.02
NEDD9-214ENST00000513989 UNQ9370/PRO34162Q6UXP9 181 aa8.66□□□□□ -1.02
NEDD9-214ENST00000513989 UTS2BQ765I0 119 aa8.66□□□□□ -1.02
NEDD9-214ENST00000513989 KRT74Q7RTS7 529 aa8.66□□□□□ -1.02
NEDD9-214ENST00000513989 DTX2Q86UW9 622 aa8.66□□□□□ -1.02
NEDD9-214ENST00000513989 OR2Z1Q8NG97 314 aa8.66□□□□□ -1.02
NEDD9-214ENST00000513989 OR5A2Q8NGI9 324 aa8.66□□□□□ -1.02
NEDD9-214ENST00000513989 OR51A4Q8NGJ6 313 aa8.66□□□□□ -1.02
NEDD9-214ENST00000513989 NINJ1Q92982 152 aa8.66□□□□□ -1.02
NEDD9-214ENST00000513989 TRMT61AQ96FX7 289 aaKnown RBP8.66□□□□□ -1.02
NEDD9-214ENST00000513989 CCL19Q99731 98 aa8.66□□□□□ -1.02
NEDD9-214ENST00000513989 VRK1Q99986 396 aaPredicted RBP8.66□□□□□ -1.02
NEDD9-214ENST00000513989 TRAF4Q9BUZ4 470 aaPredicted RBP8.66□□□□□ -1.02
NEDD9-214ENST00000513989 RTL8AQ9BWD3 113 aa8.66□□□□□ -1.02
NEDD9-214ENST00000513989 MSL2Q9HCI7 577 aa8.66□□□□□ -1.02
NEDD9-214ENST00000513989 TCF7L1Q9HCS4 588 aa8.66□□□□□ -1.02
NEDD9-214ENST00000513989 EXOSC4Q9NPD3 245 aaKnown RBP8.66□□□□□ -1.02
NEDD9-214ENST00000513989 DLL4Q9NR61 685 aa8.66□□□□□ -1.02
NEDD9-214ENST00000513989 FOXJ3Q9UPW0 622 aa8.66□□□□□ -1.02
NEDD9-214ENST00000513989 CSPG4Q6UVK1 2322 aa8.66□□□□□ -1.02
NEDD9-214ENST00000513989 A6NIN4 97 aa8.65□□□□□ -1.02
NEDD9-214ENST00000513989 C17orf100A8MU93 164 aa8.65□□□□□ -1.02
NEDD9-214ENST00000513989 AIREO43918 545 aa8.65□□□□□ -1.02
NEDD9-214ENST00000513989 SOD3P08294 240 aa8.65□□□□□ -1.02
NEDD9-214ENST00000513989 DANCRP0C864 163 aa8.65□□□□□ -1.02
NEDD9-214ENST00000513989 ATF1P18846 271 aa8.65□□□□□ -1.02
NEDD9-214ENST00000513989 SRMP19623 302 aa8.65□□□□□ -1.02
NEDD9-214ENST00000513989 FGF9P31371 208 aaPredicted RBP8.65□□□□□ -1.02
NEDD9-214ENST00000513989 ALDH3B2P48448 385 aa8.65□□□□□ -1.02
NEDD9-214ENST00000513989 PPOXP50336 477 aa8.65□□□□□ -1.02
NEDD9-214ENST00000513989 MMP15P51511 669 aa8.65□□□□□ -1.02
NEDD9-214ENST00000513989 GNG3P63215 75 aa8.65□□□□□ -1.02
NEDD9-214ENST00000513989 PRDX4Q13162 271 aa8.65□□□□□ -1.02
NEDD9-214ENST00000513989 MSMPQ1L6U9 139 aa8.65□□□□□ -1.02
NEDD9-214ENST00000513989 TGIF2LYQ8IUE0 185 aa8.65□□□□□ -1.02
NEDD9-214ENST00000513989 CELF2-AS1Q8N7Q2 184 aa8.65□□□□□ -1.02
NEDD9-214ENST00000513989 OR13F1Q8NGS4 319 aa8.65□□□□□ -1.02
NEDD9-214ENST00000513989 OR10AC1Q8NH08 325 aa8.65□□□□□ -1.02
NEDD9-214ENST00000513989 NEU4Q8WWR8 484 aaPredicted RBP8.65□□□□□ -1.02
NEDD9-214ENST00000513989 ERGIC1Q969X5 290 aa8.65□□□□□ -1.02
NEDD9-214ENST00000513989 SPSB1Q96BD6 273 aa8.65□□□□□ -1.02
NEDD9-214ENST00000513989 ADAT3Q96EY9 351 aaPredicted RBP8.65□□□□□ -1.02
NEDD9-214ENST00000513989 ELMOD3Q96FG2 381 aa8.65□□□□□ -1.02
NEDD9-214ENST00000513989 RNF170Q96K19 258 aa8.65□□□□□ -1.02
NEDD9-214ENST00000513989 DERL3Q96Q80 235 aa8.65□□□□□ -1.02
NEDD9-214ENST00000513989 OR14A2Q96R54 314 aa8.65□□□□□ -1.02
NEDD9-214ENST00000513989 SOX7Q9BT81 388 aa8.65□□□□□ -1.02
NEDD9-214ENST00000513989 ADAT1Q9BUB4 502 aaKnown RBP8.65□□□□□ -1.02
NEDD9-214ENST00000513989 CHST5Q9GZS9 411 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms