RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 ASH2LQ9UBL3 628 aa8.34□□□□□ -1.07
MSH3-203ENST00000512531 CSMD1Q96PZ7 3565 aa8.33□□□□□ -1.08
MSH3-203ENST00000512531 FBN2P35556 2912 aa8.33□□□□□ -1.08
MSH3-203ENST00000512531 F8P00451 2351 aa8.33□□□□□ -1.08
MSH3-203ENST00000512531 A0A0U1RQV5 110 aa8.33□□□□□ -1.08
MSH3-203ENST00000512531 A0A1B0GTH9 108 aa8.33□□□□□ -1.08
MSH3-203ENST00000512531 TMEM272A0A1B0GTI8 110 aa8.33□□□□□ -1.08
MSH3-203ENST00000512531 DHRS7CA6NNS2 312 aa8.33□□□□□ -1.08
MSH3-203ENST00000512531 AQP7O14520 342 aa8.33□□□□□ -1.08
MSH3-203ENST00000512531 EFNA2O43921 213 aa8.33□□□□□ -1.08
MSH3-203ENST00000512531 NDUFB6O95139 128 aa8.33□□□□□ -1.08
MSH3-203ENST00000512531 CD3EP07766 207 aa8.33□□□□□ -1.08
MSH3-203ENST00000512531 ITGA5P08648 1049 aa8.33□□□□□ -1.08
MSH3-203ENST00000512531 CD37P11049 281 aa8.33□□□□□ -1.08
MSH3-203ENST00000512531 ZNF93P35789 620 aaPredicted RBP8.33□□□□□ -1.08
MSH3-203ENST00000512531 CBX5P45973 191 aa8.33□□□□□ -1.08
MSH3-203ENST00000512531 SLC6A9P48067 706 aa8.33□□□□□ -1.08
MSH3-203ENST00000512531 P2RY4P51582 365 aa8.33□□□□□ -1.08
MSH3-203ENST00000512531 MRPS34P82930 218 aaKnown RBP8.33□□□□□ -1.08
MSH3-203ENST00000512531 SPOCK1Q08629 439 aa8.33□□□□□ -1.08
MSH3-203ENST00000512531 DBPQ10586 325 aaPredicted RBP8.33□□□□□ -1.08
MSH3-203ENST00000512531 TNK1Q13470 666 aa8.33□□□□□ -1.08
MSH3-203ENST00000512531 GSG1Q2KHT4 349 aa8.33□□□□□ -1.08
MSH3-203ENST00000512531 NRN1LQ496H8 165 aa8.33□□□□□ -1.08
MSH3-203ENST00000512531 ZNF324BQ6AW86 544 aaPredicted RBP8.33□□□□□ -1.08
MSH3-203ENST00000512531 MTFR2Q6P444 385 aa8.33□□□□□ -1.08
MSH3-203ENST00000512531 CORO6Q6QEF8 472 aa8.33□□□□□ -1.08
MSH3-203ENST00000512531 FOXL2NBQ6ZUU3 175 aa8.33□□□□□ -1.08
MSH3-203ENST00000512531 ZNF101Q8IZC7 436 aa8.33□□□□□ -1.08
MSH3-203ENST00000512531 STEAP2Q8NFT2 490 aa8.33□□□□□ -1.08
MSH3-203ENST00000512531 OR10AC1Q8NH08 325 aa8.33□□□□□ -1.08
MSH3-203ENST00000512531 THOC3Q96J01 351 aaKnown RBP8.33□□□□□ -1.08
MSH3-203ENST00000512531 GINS4Q9BRT9 223 aa8.33□□□□□ -1.08
MSH3-203ENST00000512531 TP63Q9H3D4 680 aaPredicted RBP8.33□□□□□ -1.08
MSH3-203ENST00000512531 RGCCQ9H4X1 137 aa8.33□□□□□ -1.08
MSH3-203ENST00000512531 NKIRAS2Q9NYR9 191 aa8.33□□□□□ -1.08
MSH3-203ENST00000512531 LRFN1Q9P244 771 aa8.33□□□□□ -1.08
MSH3-203ENST00000512531 FBLN5Q9UBX5 448 aa8.33□□□□□ -1.08
MSH3-203ENST00000512531 POU2F3Q9UKI9 436 aa8.33□□□□□ -1.08
MSH3-203ENST00000512531 OSGIN2Q9Y236 505 aa8.33□□□□□ -1.08
MSH3-203ENST00000512531 KLF13Q9Y2Y9 288 aaPredicted RBP8.33□□□□□ -1.08
MSH3-203ENST00000512531 LHFPL6Q9Y693 200 aa8.33□□□□□ -1.08
MSH3-203ENST00000512531 U3KQE9 123 aa8.33□□□□□ -1.08
MSH3-203ENST00000512531 A8MV72 311 aaPredicted RBP8.32□□□□□ -1.08
MSH3-203ENST00000512531 ZNF736B4DX44 427 aaPredicted RBP8.32□□□□□ -1.08
MSH3-203ENST00000512531 KLRC4-KLRK1H3BQV0 150 aa8.32□□□□□ -1.08
MSH3-203ENST00000512531 TNFSF11O14788 317 aa8.32□□□□□ -1.08
MSH3-203ENST00000512531 ZIC3O60481 467 aa8.32□□□□□ -1.08
MSH3-203ENST00000512531 RAB3DO95716 219 aa8.32□□□□□ -1.08
MSH3-203ENST00000512531 WDPCPO95876 746 aa8.32□□□□□ -1.08
MSH3-203ENST00000512531 TTRP02766 147 aa8.32□□□□□ -1.08
MSH3-203ENST00000512531 IFNA6P05013 189 aa8.32□□□□□ -1.08
MSH3-203ENST00000512531 CST2P09228 141 aa8.32□□□□□ -1.08
MSH3-203ENST00000512531 PRF1P14222 555 aa8.32□□□□□ -1.08
MSH3-203ENST00000512531 CCL1P22362 96 aa8.32□□□□□ -1.08
MSH3-203ENST00000512531 BTCP35070 178 aa8.32□□□□□ -1.08
MSH3-203ENST00000512531 CCR6P51684 374 aa8.32□□□□□ -1.08
MSH3-203ENST00000512531 PRKXP51817 358 aa8.32□□□□□ -1.08
MSH3-203ENST00000512531 ZNF121P58317 390 aaPredicted RBP8.32□□□□□ -1.08
MSH3-203ENST00000512531 PMPCAQ10713 525 aa8.32□□□□□ -1.08
MSH3-203ENST00000512531 MFAP5Q13361 173 aa8.32□□□□□ -1.08
MSH3-203ENST00000512531 PPA1Q15181 289 aa8.32□□□□□ -1.08
MSH3-203ENST00000512531 RAB35Q15286 201 aa8.32□□□□□ -1.08
MSH3-203ENST00000512531 CNN3Q15417 329 aaKnown RBP8.32□□□□□ -1.08
MSH3-203ENST00000512531 PNLIPRP3Q17RR3 467 aa8.32□□□□□ -1.08
MSH3-203ENST00000512531 RIPPLY2Q5TAB7 128 aa8.32□□□□□ -1.08
MSH3-203ENST00000512531 SFRP4Q6FHJ7 346 aaPredicted RBP8.32□□□□□ -1.08
MSH3-203ENST00000512531 FAM166AQ6J272 317 aa8.32□□□□□ -1.08
MSH3-203ENST00000512531 LIN54Q6MZP7 749 aa8.32□□□□□ -1.08
MSH3-203ENST00000512531 STEAP1BQ6NZ63 245 aa8.32□□□□□ -1.08
MSH3-203ENST00000512531 C11orf88Q6PI97 169 aa8.32□□□□□ -1.08
MSH3-203ENST00000512531 FAM180AQ6UWF9 173 aa8.32□□□□□ -1.08
MSH3-203ENST00000512531 DRAM2Q6UX65 266 aa8.32□□□□□ -1.08
MSH3-203ENST00000512531 GLDNQ6ZMI3 551 aaPredicted RBP8.32□□□□□ -1.08
MSH3-203ENST00000512531 DNM1P46Q6ZS02 220 aa8.32□□□□□ -1.08
MSH3-203ENST00000512531 AAED1Q7RTV5 226 aa8.32□□□□□ -1.08
MSH3-203ENST00000512531 MDGA2Q7Z553 956 aa8.32□□□□□ -1.08
MSH3-203ENST00000512531 TMEM17Q86X19 198 aa8.32□□□□□ -1.08
MSH3-203ENST00000512531 MCEMP1Q8IX19 187 aa8.32□□□□□ -1.08
MSH3-203ENST00000512531 C20orf196Q8IYI0 205 aa8.32□□□□□ -1.08
MSH3-203ENST00000512531 BEST3Q8N1M1 668 aa8.32□□□□□ -1.08
MSH3-203ENST00000512531 SPICQ8N5J4 248 aa8.32□□□□□ -1.08
MSH3-203ENST00000512531 CHST4Q8NCG5 386 aa8.32□□□□□ -1.08
MSH3-203ENST00000512531 OR56B1Q8NGI3 324 aa8.32□□□□□ -1.08
MSH3-203ENST00000512531 ZNF431Q8TF32 576 aaPredicted RBP8.32□□□□□ -1.08
MSH3-203ENST00000512531 ORAI1Q96D31 301 aa8.32□□□□□ -1.08
MSH3-203ENST00000512531 TMEM246Q9BRR3 403 aa8.32□□□□□ -1.08
MSH3-203ENST00000512531 GHITMQ9H3K2 345 aa8.32□□□□□ -1.08
MSH3-203ENST00000512531 PLEK2Q9NYT0 353 aa8.32□□□□□ -1.08
MSH3-203ENST00000512531 FBXL7Q9UJT9 491 aa8.32□□□□□ -1.08
MSH3-203ENST00000512531 MCTS1Q9ULC4 181 aaKnown RBP8.32□□□□□ -1.08
MSH3-203ENST00000512531 FREM3P0C091 2139 aa8.32□□□□□ -1.08
MSH3-203ENST00000512531 MYO7BQ6PIF6 2116 aa8.32□□□□□ -1.08
MSH3-203ENST00000512531 PKDREJQ9NTG1 2253 aa8.31□□□□□ -1.08
MSH3-203ENST00000512531 PRSS44E7EML9 344 aa8.31□□□□□ -1.08
MSH3-203ENST00000512531 H3BSH0 61 aa8.31□□□□□ -1.08
MSH3-203ENST00000512531 H3BUI4 141 aa8.31□□□□□ -1.08
MSH3-203ENST00000512531 ARPC1BO15143 372 aaKnown RBP8.31□□□□□ -1.08
MSH3-203ENST00000512531 ZG16O60844 167 aa8.31□□□□□ -1.08
MSH3-203ENST00000512531 DHRS3O75911 302 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms