RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 THRSPQ92748 146 aa12.09□□□□□ -0.47
RNF4-208ENST00000507247 PIGTQ969N2 578 aa12.09□□□□□ -0.47
RNF4-208ENST00000507247 C14orf79Q96F83 325 aa12.09□□□□□ -0.47
RNF4-208ENST00000507247 ZCCHC4Q9H5U6 513 aa12.09□□□□□ -0.47
RNF4-208ENST00000507247 PLEKHF2Q9H8W4 249 aa12.09□□□□□ -0.47
RNF4-208ENST00000507247 DSCAMO60469 2012 aa12.09□□□□□ -0.47
RNF4-208ENST00000507247 CHD3Q12873 2000 aaKnown RBP12.08□□□□□ -0.48
RNF4-208ENST00000507247 B9A039 149 aa12.08□□□□□ -0.48
RNF4-208ENST00000507247 NAT2P11245 290 aa12.08□□□□□ -0.48
RNF4-208ENST00000507247 ATF1P18846 271 aa12.08□□□□□ -0.48
RNF4-208ENST00000507247 CALRP27797 417 aaKnown RBP12.08□□□□□ -0.48
RNF4-208ENST00000507247 C11orf71Q6IPW1 123 aa12.08□□□□□ -0.48
RNF4-208ENST00000507247 MOB3CQ70IA8 216 aa12.08□□□□□ -0.48
RNF4-208ENST00000507247 DTX2Q86UW9 622 aa12.08□□□□□ -0.48
RNF4-208ENST00000507247 TMEM200AQ86VY9 491 aa12.08□□□□□ -0.48
RNF4-208ENST00000507247 ZNF611Q8N823 705 aa12.08□□□□□ -0.48
RNF4-208ENST00000507247 OR10AD1Q8NGE0 317 aa12.08□□□□□ -0.48
RNF4-208ENST00000507247 ITPKCQ96DU7 683 aa12.08□□□□□ -0.48
RNF4-208ENST00000507247 ADAT1Q9BUB4 502 aaKnown RBP12.08□□□□□ -0.48
RNF4-208ENST00000507247 TMEM100Q9NV29 134 aa12.08□□□□□ -0.48
RNF4-208ENST00000507247 FOXJ3Q9UPW0 622 aa12.08□□□□□ -0.48
RNF4-208ENST00000507247 MPC1Q9Y5U8 109 aa12.08□□□□□ -0.48
RNF4-208ENST00000507247 M0R233 179 aa12.07□□□□□ -0.48
RNF4-208ENST00000507247 SULT1B1O43704 296 aa12.07□□□□□ -0.48
RNF4-208ENST00000507247 ARL6IP5O75915 188 aa12.07□□□□□ -0.48
RNF4-208ENST00000507247 ADRA2CP18825 462 aa12.07□□□□□ -0.48
RNF4-208ENST00000507247 SRMP19623 302 aa12.07□□□□□ -0.48
RNF4-208ENST00000507247 TMBIM6P55061 237 aa12.07□□□□□ -0.48
RNF4-208ENST00000507247 VBP1P61758 197 aa12.07□□□□□ -0.48
RNF4-208ENST00000507247 FOXB2Q5VYV0 432 aa12.07□□□□□ -0.48
RNF4-208ENST00000507247 PLCXD3Q63HM9 321 aa12.07□□□□□ -0.48
RNF4-208ENST00000507247 RNF144BQ7Z419 303 aa12.07□□□□□ -0.48
RNF4-208ENST00000507247 LRRTM1Q86UE6 522 aa12.07□□□□□ -0.48
RNF4-208ENST00000507247 ZDHHC23Q8IYP9 409 aa12.07□□□□□ -0.48
RNF4-208ENST00000507247 FTMTQ8N4E7 242 aa12.07□□□□□ -0.48
RNF4-208ENST00000507247 OR1M1Q8NGA1 313 aa12.07□□□□□ -0.48
RNF4-208ENST00000507247 OR5D14Q8NGL3 314 aa12.07□□□□□ -0.48
RNF4-208ENST00000507247 OR13G1Q8NGZ3 307 aa12.07□□□□□ -0.48
RNF4-208ENST00000507247 TRMT10AQ8TBZ6 339 aaKnown RBP12.07□□□□□ -0.48
RNF4-208ENST00000507247 NPRL2Q8WTW4 380 aa12.07□□□□□ -0.48
RNF4-208ENST00000507247 MARVELD3Q96A59 401 aa12.07□□□□□ -0.48
RNF4-208ENST00000507247 ISOC1Q96CN7 298 aa12.07□□□□□ -0.48
RNF4-208ENST00000507247 TRAF4Q9BUZ4 470 aaPredicted RBP12.07□□□□□ -0.48
RNF4-208ENST00000507247 CBLN4Q9NTU7 201 aa12.07□□□□□ -0.48
RNF4-208ENST00000507247 FAIMQ9NVQ4 179 aa12.07□□□□□ -0.48
RNF4-208ENST00000507247 CGGBP1Q9UFW8 167 aaPredicted RBP12.07□□□□□ -0.48
RNF4-208ENST00000507247 GSTK1Q9Y2Q3 226 aa12.07□□□□□ -0.48
RNF4-208ENST00000507247 PLSCR5A0PG75 271 aa12.06□□□□□ -0.48
RNF4-208ENST00000507247 F5H5P2 479 aa12.06□□□□□ -0.48
RNF4-208ENST00000507247 SPRY3O43610 288 aa12.06□□□□□ -0.48
RNF4-208ENST00000507247 ALX3O95076 343 aa12.06□□□□□ -0.48
RNF4-208ENST00000507247 IGHV1-46P01743 117 aa12.06□□□□□ -0.48
RNF4-208ENST00000507247 MAS1P04201 325 aa12.06□□□□□ -0.48
RNF4-208ENST00000507247 RAB3AP20336 220 aa12.06□□□□□ -0.48
RNF4-208ENST00000507247 AZGP1P25311 298 aaKnown RBP12.06□□□□□ -0.48
RNF4-208ENST00000507247 THBS2P35442 1172 aa12.06□□□□□ -0.48
RNF4-208ENST00000507247 ZNF81P51508 661 aa12.06□□□□□ -0.48
RNF4-208ENST00000507247 OR8G1Q15617 311 aa12.06□□□□□ -0.48
RNF4-208ENST00000507247 MOGQ16653 247 aa12.06□□□□□ -0.48
RNF4-208ENST00000507247 SPRNQ5BIV9 151 aa12.06□□□□□ -0.48
RNF4-208ENST00000507247 AGAP6Q5VW22 663 aa12.06□□□□□ -0.48
RNF4-208ENST00000507247 CRIP3Q6Q6R5 217 aa12.06□□□□□ -0.48
RNF4-208ENST00000507247 WDR86Q86TI4 376 aa12.06□□□□□ -0.48
RNF4-208ENST00000507247 ZCCHC24Q8N2G6 241 aaKnown RBP12.06□□□□□ -0.48
RNF4-208ENST00000507247 OR2Z1Q8NG97 314 aa12.06□□□□□ -0.48
RNF4-208ENST00000507247 RAB2BQ8WUD1 216 aa12.06□□□□□ -0.48
RNF4-208ENST00000507247 OR5P3Q8WZ94 311 aa12.06□□□□□ -0.48
RNF4-208ENST00000507247 KCTD7Q96MP8 289 aa12.06□□□□□ -0.48
RNF4-208ENST00000507247 GFI1Q99684 422 aa12.06□□□□□ -0.48
RNF4-208ENST00000507247 NKX3-1Q99801 234 aaPredicted RBP12.06□□□□□ -0.48
RNF4-208ENST00000507247 SLC22A4Q9H015 551 aa12.06□□□□□ -0.48
RNF4-208ENST00000507247 TCF7L1Q9HCS4 588 aa12.06□□□□□ -0.48
RNF4-208ENST00000507247 CYSLTR2Q9NS75 346 aa12.06□□□□□ -0.48
RNF4-208ENST00000507247 CKLFQ9UBR5 152 aa12.06□□□□□ -0.48
RNF4-208ENST00000507247 LAMP3Q9UQV4 416 aa12.06□□□□□ -0.48
RNF4-208ENST00000507247 CACNA1DQ01668 2161 aa12.05□□□□□ -0.48
RNF4-208ENST00000507247 IGKV1-27A0A075B6S5 117 aa12.05□□□□□ -0.48
RNF4-208ENST00000507247 TRAV1-2A0A0B4J238 106 aa12.05□□□□□ -0.48
RNF4-208ENST00000507247 A6NHS1 94 aa12.05□□□□□ -0.48
RNF4-208ENST00000507247 ANXA2P2A6NMY6 339 aa12.05□□□□□ -0.48
RNF4-208ENST00000507247 C17orf100A8MU93 164 aa12.05□□□□□ -0.48
RNF4-208ENST00000507247 CLEC2LP0C7M8 214 aa12.05□□□□□ -0.48
RNF4-208ENST00000507247 PRF1P14222 555 aa12.05□□□□□ -0.48
RNF4-208ENST00000507247 MYL9P24844 172 aa12.05□□□□□ -0.48
RNF4-208ENST00000507247 BDKRB2P30411 391 aa12.05□□□□□ -0.48
RNF4-208ENST00000507247 SNRPD2P62316 118 aaKnown RBP12.05□□□□□ -0.48
RNF4-208ENST00000507247 PPP3R1P63098 170 aa12.05□□□□□ -0.48
RNF4-208ENST00000507247 CNN3Q15417 329 aaKnown RBP12.05□□□□□ -0.48
RNF4-208ENST00000507247 CEACAM21Q3KPI0 293 aa12.05□□□□□ -0.48
RNF4-208ENST00000507247 DNAAF1Q8NEP3 725 aa12.05□□□□□ -0.48
RNF4-208ENST00000507247 OR52N4Q8NGI2 321 aa12.05□□□□□ -0.48
RNF4-208ENST00000507247 OR8S1Q8NH09 359 aa12.05□□□□□ -0.48
RNF4-208ENST00000507247 ZNF420Q8TAQ5 688 aaPredicted RBP12.05□□□□□ -0.48
RNF4-208ENST00000507247 C12orf43Q96C57 262 aaKnown RBP12.05□□□□□ -0.48
RNF4-208ENST00000507247 ELMOD3Q96FG2 381 aa12.05□□□□□ -0.48
RNF4-208ENST00000507247 SPACA5Q96QH8 159 aa12.05□□□□□ -0.48
RNF4-208ENST00000507247 TPK1Q9H3S4 243 aa12.05□□□□□ -0.48
RNF4-208ENST00000507247 DYNLRB1Q9NP97 96 aa12.05□□□□□ -0.48
RNF4-208ENST00000507247 SNTG1Q9NSN8 517 aa12.05□□□□□ -0.48
RNF4-208ENST00000507247 HRNRQ86YZ3 2850 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms