RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 C19orf18Q8NEA5 215 aa11□□□□□ -0.65
TCOF1-209ENST00000506630 SEMA6DQ8NFY4 1073 aa11□□□□□ -0.65
TCOF1-209ENST00000506630 APH1BQ8WW43 257 aa11□□□□□ -0.65
TCOF1-209ENST00000506630 TMEM186Q96B77 213 aa11□□□□□ -0.65
TCOF1-209ENST00000506630 RTL8AQ9BWD3 113 aa11□□□□□ -0.65
TCOF1-209ENST00000506630 AMBNQ9NP70 447 aa11□□□□□ -0.65
TCOF1-209ENST00000506630 ABCB9Q9NP78 766 aa11□□□□□ -0.65
TCOF1-209ENST00000506630 RNF7Q9UBF6 113 aa11□□□□□ -0.65
TCOF1-209ENST00000506630 SLC22A13Q9Y226 551 aa11□□□□□ -0.65
TCOF1-209ENST00000506630 PIGLQ9Y2B2 252 aa11□□□□□ -0.65
TCOF1-209ENST00000506630 EXOGQ9Y2C4 368 aaKnown RBP11□□□□□ -0.65
TCOF1-209ENST00000506630 PCDHGB1Q9Y5G3 927 aa11□□□□□ -0.65
TCOF1-209ENST00000506630 MPC1Q9Y5U8 109 aa11□□□□□ -0.65
TCOF1-209ENST00000506630 PPIAL4EA0A075B759 164 aa10.99□□□□□ -0.65
TCOF1-209ENST00000506630 PPIAL4DF5H284 164 aa10.99□□□□□ -0.65
TCOF1-209ENST00000506630 MTRF1O75570 445 aaKnown RBP10.99□□□□□ -0.65
TCOF1-209ENST00000506630 CST4P01036 141 aa10.99□□□□□ -0.65
TCOF1-209ENST00000506630 PPIAL4FP0DN26 164 aa10.99□□□□□ -0.65
TCOF1-209ENST00000506630 ATP6V1B1P15313 513 aa10.99□□□□□ -0.65
TCOF1-209ENST00000506630 RPS2P15880 293 aaKnown RBP10.99□□□□□ -0.65
TCOF1-209ENST00000506630 FAHP16930 419 aa10.99□□□□□ -0.65
TCOF1-209ENST00000506630 PCMT1P22061 227 aa10.99□□□□□ -0.65
TCOF1-209ENST00000506630 CD80P33681 288 aa10.99□□□□□ -0.65
TCOF1-209ENST00000506630 PSMB10P40306 273 aa10.99□□□□□ -0.65
TCOF1-209ENST00000506630 CSNK2BP67870 215 aa10.99□□□□□ -0.65
TCOF1-209ENST00000506630 HOXA4Q00056 320 aaPredicted RBP10.99□□□□□ -0.65
TCOF1-209ENST00000506630 RIPPLY1Q0D2K3 151 aa10.99□□□□□ -0.65
TCOF1-209ENST00000506630 ZNF154Q13106 437 aa10.99□□□□□ -0.65
TCOF1-209ENST00000506630 CDONQ4KMG0 1287 aa10.99□□□□□ -0.65
TCOF1-209ENST00000506630 ZNF684Q5T5D7 378 aa10.99□□□□□ -0.65
TCOF1-209ENST00000506630 ZNF691Q5VV52 312 aa10.99□□□□□ -0.65
TCOF1-209ENST00000506630 ZNF826PQ6ZT77 177 aa10.99□□□□□ -0.65
TCOF1-209ENST00000506630 WDR86Q86TI4 376 aa10.99□□□□□ -0.65
TCOF1-209ENST00000506630 CATSPERDQ86XM0 798 aa10.99□□□□□ -0.65
TCOF1-209ENST00000506630 PLPP7Q8NBV4 271 aa10.99□□□□□ -0.65
TCOF1-209ENST00000506630 OR1M1Q8NGA1 313 aa10.99□□□□□ -0.65
TCOF1-209ENST00000506630 CNIH3Q8TBE1 160 aa10.99□□□□□ -0.65
TCOF1-209ENST00000506630 RORBQ92753 470 aa10.99□□□□□ -0.65
TCOF1-209ENST00000506630 ITPKCQ96DU7 683 aa10.99□□□□□ -0.65
TCOF1-209ENST00000506630 VCXQ9H320 206 aa10.99□□□□□ -0.65
TCOF1-209ENST00000506630 PATZ1Q9HBE1 687 aaKnown RBP10.99□□□□□ -0.65
TCOF1-209ENST00000506630 ACOXLQ9NUZ1 547 aa10.99□□□□□ -0.65
TCOF1-209ENST00000506630 HIF1ANQ9NWT6 349 aa10.99□□□□□ -0.65
TCOF1-209ENST00000506630 ENPP5Q9UJA9 477 aa10.99□□□□□ -0.65
TCOF1-209ENST00000506630 RPL36Q9Y3U8 105 aaKnown RBP10.99□□□□□ -0.65
TCOF1-209ENST00000506630 PPIAL4AQ9Y536 164 aa10.99□□□□□ -0.65
TCOF1-209ENST00000506630 CEACAM18A8MTB9 384 aa10.98□□□□□ -0.65
TCOF1-209ENST00000506630 H3BSH0 61 aa10.98□□□□□ -0.65
TCOF1-209ENST00000506630 J3QRE1 110 aa10.98□□□□□ -0.65
TCOF1-209ENST00000506630 PLPP2O43688 288 aa10.98□□□□□ -0.65
TCOF1-209ENST00000506630 ACTA2P62736 377 aa10.98□□□□□ -0.65
TCOF1-209ENST00000506630 ACTG2P63267 376 aa10.98□□□□□ -0.65
TCOF1-209ENST00000506630 LCN2P80188 198 aa10.98□□□□□ -0.65
TCOF1-209ENST00000506630 RAB40BQ12829 278 aa10.98□□□□□ -0.65
TCOF1-209ENST00000506630 SMN1Q16637 294 aaKnown RBP10.98□□□□□ -0.65
TCOF1-209ENST00000506630 ZNF404Q494X3 552 aa10.98□□□□□ -0.65
TCOF1-209ENST00000506630 WDR38Q5JTN6 314 aa10.98□□□□□ -0.65
TCOF1-209ENST00000506630 CEP78Q5JTW2 689 aa10.98□□□□□ -0.65
TCOF1-209ENST00000506630 PLCXD3Q63HM9 321 aa10.98□□□□□ -0.65
TCOF1-209ENST00000506630 SFRP4Q6FHJ7 346 aaPredicted RBP10.98□□□□□ -0.65
TCOF1-209ENST00000506630 ACBD7Q8N6N7 88 aa10.98□□□□□ -0.65
TCOF1-209ENST00000506630 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.98□□□□□ -0.65
TCOF1-209ENST00000506630 SETD9Q8NE22 299 aa10.98□□□□□ -0.65
TCOF1-209ENST00000506630 DEFB108BQ8NET1 73 aa10.98□□□□□ -0.65
TCOF1-209ENST00000506630 HPSE2Q8WWQ2 592 aa10.98□□□□□ -0.65
TCOF1-209ENST00000506630 MRPL48Q96GC5 212 aaKnown RBP10.98□□□□□ -0.65
TCOF1-209ENST00000506630 RNF170Q96K19 258 aa10.98□□□□□ -0.65
TCOF1-209ENST00000506630 HIST1H2AAQ96QV6 131 aa10.98□□□□□ -0.65
TCOF1-209ENST00000506630 ADI1Q9BV57 179 aa10.98□□□□□ -0.65
TCOF1-209ENST00000506630 ALG8Q9BVK2 526 aa10.98□□□□□ -0.65
TCOF1-209ENST00000506630 TMEM165Q9HC07 324 aa10.98□□□□□ -0.65
TCOF1-209ENST00000506630 NKX1-2Q9UD57 310 aaPredicted RBP10.98□□□□□ -0.65
TCOF1-209ENST00000506630 MYRFQ9Y2G1 1151 aa10.98□□□□□ -0.65
TCOF1-209ENST00000506630 TRAV20A0A0B4J274 112 aa10.97□□□□□ -0.65
TCOF1-209ENST00000506630 A0A1B0GVI7 797 aa10.97□□□□□ -0.65
TCOF1-209ENST00000506630 TMEM210A6NLX4 147 aa10.97□□□□□ -0.65
TCOF1-209ENST00000506630 F5H0A9 414 aaPredicted RBP10.97□□□□□ -0.65
TCOF1-209ENST00000506630 C3orf80F5H4A9 247 aa10.97□□□□□ -0.65
TCOF1-209ENST00000506630 H0YHG0 523 aa10.97□□□□□ -0.65
TCOF1-209ENST00000506630 J3QLW9 94 aa10.97□□□□□ -0.65
TCOF1-209ENST00000506630 WBP4O75554 376 aaKnown RBP10.97□□□□□ -0.65
TCOF1-209ENST00000506630 FOXH1O75593 365 aa10.97□□□□□ -0.65
TCOF1-209ENST00000506630 FADS2O95864 444 aaKnown RBP10.97□□□□□ -0.65
TCOF1-209ENST00000506630 HTR1AP08908 422 aa10.97□□□□□ -0.65
TCOF1-209ENST00000506630 ZNF19P17023 458 aa10.97□□□□□ -0.65
TCOF1-209ENST00000506630 OR12D2P58182 307 aa10.97□□□□□ -0.65
TCOF1-209ENST00000506630 ISL1P61371 349 aa10.97□□□□□ -0.65
TCOF1-209ENST00000506630 SEC61A1P61619 476 aaKnown RBP10.97□□□□□ -0.65
TCOF1-209ENST00000506630 SLC34A1Q06495 639 aa10.97□□□□□ -0.65
TCOF1-209ENST00000506630 ESCO2Q56NI9 601 aa10.97□□□□□ -0.65
TCOF1-209ENST00000506630 DMRTC1Q5HYR2 192 aa10.97□□□□□ -0.65
TCOF1-209ENST00000506630 ZBTB37Q5TC79 503 aa10.97□□□□□ -0.65
TCOF1-209ENST00000506630 MOB3CQ70IA8 216 aa10.97□□□□□ -0.65
TCOF1-209ENST00000506630 DOK3Q7L591 496 aa10.97□□□□□ -0.65
TCOF1-209ENST00000506630 LHFPL3Q86UP9 236 aa10.97□□□□□ -0.65
TCOF1-209ENST00000506630 PRSS35Q8N3Z0 413 aa10.97□□□□□ -0.65
TCOF1-209ENST00000506630 GCSAMQ8N6F7 178 aa10.97□□□□□ -0.65
TCOF1-209ENST00000506630 OR52I1Q8NGK6 324 aa10.97□□□□□ -0.65
TCOF1-209ENST00000506630 OR14K1Q8NGZ2 314 aa10.97□□□□□ -0.65
TCOF1-209ENST00000506630 SGMS2Q8NHU3 365 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms