RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 MSMBP08118 114 aa15.3■□□□□ 0.04
PDLIM7-209ENST00000503346 PPIAL4FP0DN26 164 aa15.3■□□□□ 0.04
PDLIM7-209ENST00000503346 NF1P21359 2839 aa15.3■□□□□ 0.04
PDLIM7-209ENST00000503346 PSMB10P40306 273 aa15.3■□□□□ 0.04
PDLIM7-209ENST00000503346 DVL1P1P54792 670 aaPredicted RBP15.3■□□□□ 0.04
PDLIM7-209ENST00000503346 ZNF154Q13106 437 aa15.3■□□□□ 0.04
PDLIM7-209ENST00000503346 THAP5Q7Z6K1 395 aa15.3■□□□□ 0.04
PDLIM7-209ENST00000503346 LHFPL3Q86UP9 236 aa15.3■□□□□ 0.04
PDLIM7-209ENST00000503346 C11orf53Q8IXP5 236 aa15.3■□□□□ 0.04
PDLIM7-209ENST00000503346 C8orf59Q8N0T1 100 aaPredicted RBP15.3■□□□□ 0.04
PDLIM7-209ENST00000503346 SYS1Q8N2H4 156 aa15.3■□□□□ 0.04
PDLIM7-209ENST00000503346 KLHL36Q8N4N3 616 aa15.3■□□□□ 0.04
PDLIM7-209ENST00000503346 CCDC54Q8NEL0 328 aa15.3■□□□□ 0.04
PDLIM7-209ENST00000503346 OR2G2Q8NGZ5 317 aa15.3■□□□□ 0.04
PDLIM7-209ENST00000503346 OR51F2Q8NH61 342 aa15.3■□□□□ 0.04
PDLIM7-209ENST00000503346 HPSE2Q8WWQ2 592 aa15.3■□□□□ 0.04
PDLIM7-209ENST00000503346 TFAP2CQ92754 450 aa15.3■□□□□ 0.04
PDLIM7-209ENST00000503346 ALG8Q9BVK2 526 aa15.3■□□□□ 0.04
PDLIM7-209ENST00000503346 TLNRD1Q9H1K6 362 aa15.3■□□□□ 0.04
PDLIM7-209ENST00000503346 C1orf123Q9NWV4 160 aa15.3■□□□□ 0.04
PDLIM7-209ENST00000503346 ERVK13-1Q9NX77 482 aa15.3■□□□□ 0.04
PDLIM7-209ENST00000503346 UBAP1Q9NZ09 502 aa15.3■□□□□ 0.04
PDLIM7-209ENST00000503346 ENPP5Q9UJA9 477 aa15.3■□□□□ 0.04
PDLIM7-209ENST00000503346 PIGLQ9Y2B2 252 aa15.3■□□□□ 0.04
PDLIM7-209ENST00000503346 PPIAL4AQ9Y536 164 aa15.3■□□□□ 0.04
PDLIM7-209ENST00000503346 DYSFO75923 2080 aa15.29■□□□□ 0.04
PDLIM7-209ENST00000503346 YLPM1P49750 1951 aaKnown RBP15.29■□□□□ 0.04
PDLIM7-209ENST00000503346 IRGMA1A4Y4 181 aa15.29■□□□□ 0.04
PDLIM7-209ENST00000503346 A6NLC8 198 aa15.29■□□□□ 0.04
PDLIM7-209ENST00000503346 TMEM210A6NLX4 147 aa15.29■□□□□ 0.04
PDLIM7-209ENST00000503346 J3QLW9 94 aa15.29■□□□□ 0.04
PDLIM7-209ENST00000503346 CRLF1O75462 422 aa15.29■□□□□ 0.04
PDLIM7-209ENST00000503346 ZNF205O95201 554 aa15.29■□□□□ 0.04
PDLIM7-209ENST00000503346 GNAO1P09471 354 aa15.29■□□□□ 0.04
PDLIM7-209ENST00000503346 FAHP16930 419 aa15.29■□□□□ 0.04
PDLIM7-209ENST00000503346 ZNF19P17023 458 aa15.29■□□□□ 0.04
PDLIM7-209ENST00000503346 CPT2P23786 658 aa15.29■□□□□ 0.04
PDLIM7-209ENST00000503346 THBS2P35442 1172 aa15.29■□□□□ 0.04
PDLIM7-209ENST00000503346 KIR3DL2P43630 455 aa15.29■□□□□ 0.04
PDLIM7-209ENST00000503346 ZNF404Q494X3 552 aa15.29■□□□□ 0.04
PDLIM7-209ENST00000503346 FAM76BQ5HYJ3 339 aa15.29■□□□□ 0.04
PDLIM7-209ENST00000503346 FAM201AQ5SY85 155 aa15.29■□□□□ 0.04
PDLIM7-209ENST00000503346 TMEM42Q69YG0 159 aa15.29■□□□□ 0.04
PDLIM7-209ENST00000503346 FBLIM1Q8WUP2 373 aa15.29■□□□□ 0.04
PDLIM7-209ENST00000503346 PELI1Q96FA3 418 aa15.29■□□□□ 0.04
PDLIM7-209ENST00000503346 C4orf36Q96KX1 117 aa15.29■□□□□ 0.04
PDLIM7-209ENST00000503346 HIST1H2AAQ96QV6 131 aa15.29■□□□□ 0.04
PDLIM7-209ENST00000503346 FGF23Q9GZV9 251 aaPredicted RBP15.29■□□□□ 0.04
PDLIM7-209ENST00000503346 PATZ1Q9HBE1 687 aaKnown RBP15.29■□□□□ 0.04
PDLIM7-209ENST00000503346 A0A1B0GVI7 797 aa15.28■□□□□ 0.04
PDLIM7-209ENST00000503346 CEACAM18A8MTB9 384 aa15.28■□□□□ 0.04
PDLIM7-209ENST00000503346 F5H0A9 414 aaPredicted RBP15.28■□□□□ 0.04
PDLIM7-209ENST00000503346 UBCP0CG48 685 aaKnown RBP15.28■□□□□ 0.04
PDLIM7-209ENST00000503346 DCKP27707 260 aa15.28■□□□□ 0.04
PDLIM7-209ENST00000503346 CFHR2P36980 270 aa15.28■□□□□ 0.04
PDLIM7-209ENST00000503346 CCR9P51686 369 aa15.28■□□□□ 0.04
PDLIM7-209ENST00000503346 CEACAM21Q3KPI0 293 aa15.28■□□□□ 0.04
PDLIM7-209ENST00000503346 ZNF826PQ6ZT77 177 aa15.28■□□□□ 0.04
PDLIM7-209ENST00000503346 GLCCI1Q86VQ1 547 aa15.28■□□□□ 0.04
PDLIM7-209ENST00000503346 RNF170Q96K19 258 aa15.28■□□□□ 0.04
PDLIM7-209ENST00000503346 FRRS1LQ9P0K9 344 aa15.28■□□□□ 0.04
PDLIM7-209ENST00000503346 PCDHB10Q9UN67 800 aa15.28■□□□□ 0.04
PDLIM7-209ENST00000503346 SETD2Q9BYW2 2564 aaPredicted RBP15.27■□□□□ 0.04
PDLIM7-209ENST00000503346 TRAV20A0A0B4J274 112 aa15.27■□□□□ 0.04
PDLIM7-209ENST00000503346 LGALS8O00214 317 aa15.27■□□□□ 0.04
PDLIM7-209ENST00000503346 SYT7O43581 403 aa15.27■□□□□ 0.04
PDLIM7-209ENST00000503346 LHBP01229 141 aa15.27■□□□□ 0.04
PDLIM7-209ENST00000503346 HTR1AP08908 422 aa15.27■□□□□ 0.04
PDLIM7-209ENST00000503346 LIMS3P0CW19 117 aa15.27■□□□□ 0.04
PDLIM7-209ENST00000503346 LIMS4P0CW20 117 aa15.27■□□□□ 0.04
PDLIM7-209ENST00000503346 AQP4P55087 323 aa15.27■□□□□ 0.04
PDLIM7-209ENST00000503346 NANOS3P60323 173 aaKnown RBP15.27■□□□□ 0.04
PDLIM7-209ENST00000503346 CSNK2BP67870 215 aa15.27■□□□□ 0.04
PDLIM7-209ENST00000503346 MRPL28Q13084 256 aaKnown RBP15.27■□□□□ 0.04
PDLIM7-209ENST00000503346 ODF4Q2M2E3 257 aa15.27■□□□□ 0.04
PDLIM7-209ENST00000503346 CEP78Q5JTW2 689 aa15.27■□□□□ 0.04
PDLIM7-209ENST00000503346 CLVS2Q5SYC1 327 aa15.27■□□□□ 0.04
PDLIM7-209ENST00000503346 LAIR2Q6ISS4 152 aa15.27■□□□□ 0.04
PDLIM7-209ENST00000503346 WDR82Q6UXN9 313 aa15.27■□□□□ 0.04
PDLIM7-209ENST00000503346 ZNF771Q7L3S4 317 aaPredicted RBP15.27■□□□□ 0.04
PDLIM7-209ENST00000503346 GCSAMQ8N6F7 178 aa15.27■□□□□ 0.04
PDLIM7-209ENST00000503346 OR5A2Q8NGI9 324 aa15.27■□□□□ 0.04
PDLIM7-209ENST00000503346 TMEM186Q96B77 213 aa15.27■□□□□ 0.04
PDLIM7-209ENST00000503346 TMEM246Q9BRR3 403 aa15.27■□□□□ 0.04
PDLIM7-209ENST00000503346 ISG20L2Q9H9L3 353 aaKnown RBP15.27■□□□□ 0.04
PDLIM7-209ENST00000503346 LPAR2Q9HBW0 351 aa15.27■□□□□ 0.04
PDLIM7-209ENST00000503346 HIF1ANQ9NWT6 349 aa15.27■□□□□ 0.04
PDLIM7-209ENST00000503346 NIPBLQ6KC79 2804 aaeCLIP15.27■□□□□ 0.03
PDLIM7-209ENST00000503346 LOC107986453A0A1B0GWG9 222 aa15.26■□□□□ 0.03
PDLIM7-209ENST00000503346 hCG_1807616A0A1W2PRN6 198 aa15.26■□□□□ 0.03
PDLIM7-209ENST00000503346 OR5B21A6NL26 309 aa15.26■□□□□ 0.03
PDLIM7-209ENST00000503346 PLPP2O43688 288 aa15.26■□□□□ 0.03
PDLIM7-209ENST00000503346 NRASP01111 189 aa15.26■□□□□ 0.03
PDLIM7-209ENST00000503346 ISG15P05161 165 aa15.26■□□□□ 0.03
PDLIM7-209ENST00000503346 WNT2P09544 360 aa15.26■□□□□ 0.03
PDLIM7-209ENST00000503346 PCMT1P22061 227 aa15.26■□□□□ 0.03
PDLIM7-209ENST00000503346 GNG3P63215 75 aa15.26■□□□□ 0.03
PDLIM7-209ENST00000503346 HOXA4Q00056 320 aaPredicted RBP15.26■□□□□ 0.03
PDLIM7-209ENST00000503346 RIPK1Q13546 671 aa15.26■□□□□ 0.03
PDLIM7-209ENST00000503346 TMEM244Q5VVB8 128 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms