RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 CDK9P50750 372 aaKnown RBP4.42□□□□□ -1.7
NEDD4-203ENST00000502612 CDK6Q00534 326 aa4.42□□□□□ -1.7
NEDD4-203ENST00000502612 REEP5Q00765 189 aa4.42□□□□□ -1.7
NEDD4-203ENST00000502612 SPIBQ01892 262 aa4.42□□□□□ -1.7
NEDD4-203ENST00000502612 IRF4Q15306 451 aa4.42□□□□□ -1.7
NEDD4-203ENST00000502612 CCSMST1Q4G0I0 132 aa4.42□□□□□ -1.7
NEDD4-203ENST00000502612 SPATA46Q5T0L3 261 aa4.42□□□□□ -1.7
NEDD4-203ENST00000502612 FAM71E1Q6IPT2 247 aa4.42□□□□□ -1.7
NEDD4-203ENST00000502612 REEP3Q6NUK4 255 aa4.42□□□□□ -1.7
NEDD4-203ENST00000502612 ZNF773Q6PK81 442 aa4.42□□□□□ -1.7
NEDD4-203ENST00000502612 ENPP6Q6UWR7 440 aa4.42□□□□□ -1.7
NEDD4-203ENST00000502612 TRIM69Q86WT6 500 aa4.42□□□□□ -1.7
NEDD4-203ENST00000502612 OR2L13Q8N349 312 aa4.42□□□□□ -1.7
NEDD4-203ENST00000502612 LINC00471Q8N535 108 aa4.42□□□□□ -1.7
NEDD4-203ENST00000502612 STEAP2Q8NFT2 490 aa4.42□□□□□ -1.7
NEDD4-203ENST00000502612 OR5AR1Q8NGP9 310 aa4.42□□□□□ -1.7
NEDD4-203ENST00000502612 GEMIN6Q8WXD5 167 aaKnown RBP4.42□□□□□ -1.7
NEDD4-203ENST00000502612 RLN3Q8WXF3 142 aa4.42□□□□□ -1.7
NEDD4-203ENST00000502612 GBF1Q92538 1859 aa4.42□□□□□ -1.7
NEDD4-203ENST00000502612 EMG1Q92979 244 aaKnown RBP4.42□□□□□ -1.7
NEDD4-203ENST00000502612 FAM131CQ96AQ9 280 aa4.42□□□□□ -1.7
NEDD4-203ENST00000502612 C16orf74Q96GX8 76 aa4.42□□□□□ -1.7
NEDD4-203ENST00000502612 TECTBQ96PL2 329 aa4.42□□□□□ -1.7
NEDD4-203ENST00000502612 OR2M4Q96R27 311 aa4.42□□□□□ -1.7
NEDD4-203ENST00000502612 SH3GL3Q99963 347 aa4.42□□□□□ -1.7
NEDD4-203ENST00000502612 BCL7BQ9BQE9 202 aa4.42□□□□□ -1.7
NEDD4-203ENST00000502612 SRXN1Q9BYN0 137 aa4.42□□□□□ -1.7
NEDD4-203ENST00000502612 OR51B5Q9H339 312 aa4.42□□□□□ -1.7
NEDD4-203ENST00000502612 MRPS30Q9NP92 439 aaKnown RBP4.42□□□□□ -1.7
NEDD4-203ENST00000502612 IMP3Q9NV31 184 aaKnown RBP4.42□□□□□ -1.7
NEDD4-203ENST00000502612 LYARQ9NX58 379 aaKnown RBP4.42□□□□□ -1.7
NEDD4-203ENST00000502612 CALML5Q9NZT1 146 aa4.42□□□□□ -1.7
NEDD4-203ENST00000502612 TAC3Q9UHF0 121 aa4.42□□□□□ -1.7
NEDD4-203ENST00000502612 RPH3ALQ9UNE2 315 aa4.42□□□□□ -1.7
NEDD4-203ENST00000502612 SAMHD1Q9Y3Z3 626 aaKnown RBP4.42□□□□□ -1.7
NEDD4-203ENST00000502612 NEUROG3Q9Y4Z2 214 aa4.42□□□□□ -1.7
NEDD4-203ENST00000502612 DENND4CQ5VZ89 1909 aa4.42□□□□□ -1.7
NEDD4-203ENST00000502612 PLXNA2O75051 1894 aa4.41□□□□□ -1.7
NEDD4-203ENST00000502612 MTCL1Q9Y4B5 1905 aaKnown RBP4.41□□□□□ -1.7
NEDD4-203ENST00000502612 IGHV7-81A0A0B4J1V7 117 aa4.41□□□□□ -1.7
NEDD4-203ENST00000502612 ARRDC5A6NEK1 342 aa4.41□□□□□ -1.7
NEDD4-203ENST00000502612 TNFRSF11BO00300 401 aa4.41□□□□□ -1.7
NEDD4-203ENST00000502612 UPK1AO00322 258 aa4.41□□□□□ -1.7
NEDD4-203ENST00000502612 DLGAP1O14490 977 aa4.41□□□□□ -1.7
NEDD4-203ENST00000502612 PLPP1O14494 284 aa4.41□□□□□ -1.7
NEDD4-203ENST00000502612 BCKDKO14874 412 aa4.41□□□□□ -1.7
NEDD4-203ENST00000502612 ZNF264O43296 627 aa4.41□□□□□ -1.7
NEDD4-203ENST00000502612 HCN1O60741 890 aa4.41□□□□□ -1.7
NEDD4-203ENST00000502612 UGT2B17O75795 530 aa4.41□□□□□ -1.7
NEDD4-203ENST00000502612 ETHE1O95571 254 aa4.41□□□□□ -1.7
NEDD4-203ENST00000502612 SNAP29O95721 258 aa4.41□□□□□ -1.7
NEDD4-203ENST00000502612 OXSR1O95747 527 aaPredicted RBP4.41□□□□□ -1.7
NEDD4-203ENST00000502612 C6orf47O95873 294 aa4.41□□□□□ -1.7
NEDD4-203ENST00000502612 IFNW1P05000 195 aa4.41□□□□□ -1.7
NEDD4-203ENST00000502612 IL3P08700 152 aa4.41□□□□□ -1.7
NEDD4-203ENST00000502612 SLC35G6P0C7Q6 338 aa4.41□□□□□ -1.7
NEDD4-203ENST00000502612 RBMY1CP0DJD4 496 aa4.41□□□□□ -1.7
NEDD4-203ENST00000502612 PNMTP11086 282 aa4.41□□□□□ -1.7
NEDD4-203ENST00000502612 FGF9P31371 208 aaPredicted RBP4.41□□□□□ -1.7
NEDD4-203ENST00000502612 MPIP34949 423 aa4.41□□□□□ -1.7
NEDD4-203ENST00000502612 RBMXP38159 391 aaKnown RBP4.41□□□□□ -1.7
NEDD4-203ENST00000502612 GBX2P52951 348 aaPredicted RBP4.41□□□□□ -1.7
NEDD4-203ENST00000502612 TMBIM6P55061 237 aa4.41□□□□□ -1.7
NEDD4-203ENST00000502612 BIDP55957 195 aa4.41□□□□□ -1.7
NEDD4-203ENST00000502612 KRTAP10-3P60369 221 aa4.41□□□□□ -1.7
NEDD4-203ENST00000502612 DSTNP60981 165 aa4.41□□□□□ -1.7
NEDD4-203ENST00000502612 RPS15AP62244 130 aaKnown RBP4.41□□□□□ -1.7
NEDD4-203ENST00000502612 HBA1P69905 142 aa4.41□□□□□ -1.7
NEDD4-203ENST00000502612 IL5RAQ01344 420 aa4.41□□□□□ -1.7
NEDD4-203ENST00000502612 RELAQ04206 551 aa4.41□□□□□ -1.7
NEDD4-203ENST00000502612 IL24Q13007 206 aa4.41□□□□□ -1.7
NEDD4-203ENST00000502612 ZNF79Q15937 498 aa4.41□□□□□ -1.7
NEDD4-203ENST00000502612 PYCR3Q53H96 274 aa4.41□□□□□ -1.7
NEDD4-203ENST00000502612 ZNF691Q5VV52 312 aa4.41□□□□□ -1.7
NEDD4-203ENST00000502612 TMEM225Q6GV28 225 aa4.41□□□□□ -1.7
NEDD4-203ENST00000502612 NIPAL1Q6NVV3 410 aa4.41□□□□□ -1.7
NEDD4-203ENST00000502612 TMEM179BQ7Z7N9 219 aa4.41□□□□□ -1.7
NEDD4-203ENST00000502612 CLECL1Q8IZS7 167 aa4.41□□□□□ -1.7
NEDD4-203ENST00000502612 SFXN5Q8TD22 340 aa4.41□□□□□ -1.7
NEDD4-203ENST00000502612 RAB2BQ8WUD1 216 aa4.41□□□□□ -1.7
NEDD4-203ENST00000502612 LCN9Q8WX39 176 aa4.41□□□□□ -1.7
NEDD4-203ENST00000502612 NEURL3Q96EH8 262 aa4.41□□□□□ -1.7
NEDD4-203ENST00000502612 TPD52L3Q96J77 140 aa4.41□□□□□ -1.7
NEDD4-203ENST00000502612 SECISBP2Q96T21 854 aaKnown RBP4.41□□□□□ -1.7
NEDD4-203ENST00000502612 MS4A8Q9BY19 250 aa4.41□□□□□ -1.7
NEDD4-203ENST00000502612 KIR3DX1Q9H7L2 352 aa4.41□□□□□ -1.7
NEDD4-203ENST00000502612 ISG20L2Q9H9L3 353 aaKnown RBP4.41□□□□□ -1.7
NEDD4-203ENST00000502612 CXorf21Q9HAI6 301 aa4.41□□□□□ -1.7
NEDD4-203ENST00000502612 NTN4Q9HB63 628 aa4.41□□□□□ -1.7
NEDD4-203ENST00000502612 EXD2Q9NVH0 621 aa4.41□□□□□ -1.7
NEDD4-203ENST00000502612 MS4A12Q9NXJ0 267 aa4.41□□□□□ -1.7
NEDD4-203ENST00000502612 TAS2R7Q9NYW3 318 aa4.41□□□□□ -1.7
NEDD4-203ENST00000502612 PDP1Q9P0J1 537 aaPredicted RBP4.41□□□□□ -1.7
NEDD4-203ENST00000502612 POFUT2Q9Y2G5 429 aa4.41□□□□□ -1.7
NEDD4-203ENST00000502612 MRPS7Q9Y2R9 242 aaKnown RBP4.41□□□□□ -1.7
NEDD4-203ENST00000502612 TIMM10BQ9Y5J6 103 aa4.41□□□□□ -1.7
NEDD4-203ENST00000502612 PTPRSQ13332 1948 aa4.4□□□□□ -1.7
NEDD4-203ENST00000502612 A0A0G2JRQ6 117 aa4.4□□□□□ -1.71
NEDD4-203ENST00000502612 A0A1B0GUS0 222 aa4.4□□□□□ -1.71
NEDD4-203ENST00000502612 PRAMEF26H0Y7S4 382 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms