RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 FAM234AQ9H0X4 552 aa11.91□□□□□ -0.5
SEC61A1-207ENST00000498837 DNTTIP1Q9H147 329 aa11.91□□□□□ -0.5
SEC61A1-207ENST00000498837 RANBP3Q9H6Z4 567 aaPredicted RBP11.91□□□□□ -0.5
SEC61A1-207ENST00000498837 ZNF319Q9P2F9 582 aa11.91□□□□□ -0.5
SEC61A1-207ENST00000498837 SF3B6Q9Y3B4 125 aaKnown RBP11.91□□□□□ -0.5
SEC61A1-207ENST00000498837 TENM3Q9P273 2699 aa11.9□□□□□ -0.5
SEC61A1-207ENST00000498837 NKX6-3A6NJ46 265 aa11.9□□□□□ -0.5
SEC61A1-207ENST00000498837 GYPBP06028 91 aa11.9□□□□□ -0.5
SEC61A1-207ENST00000498837 CD28P10747 220 aa11.9□□□□□ -0.5
SEC61A1-207ENST00000498837 GSK3AP49840 483 aa11.9□□□□□ -0.5
SEC61A1-207ENST00000498837 CAV3P56539 151 aa11.9□□□□□ -0.5
SEC61A1-207ENST00000498837 SMIM11AP58511 58 aa11.9□□□□□ -0.5
SEC61A1-207ENST00000498837 TSPAN31Q12999 210 aa11.9□□□□□ -0.5
SEC61A1-207ENST00000498837 HABP2Q14520 560 aaPredicted RBP11.9□□□□□ -0.5
SEC61A1-207ENST00000498837 ZBTB37Q5TC79 503 aa11.9□□□□□ -0.5
SEC61A1-207ENST00000498837 FAM57BQ71RH2 274 aa11.9□□□□□ -0.5
SEC61A1-207ENST00000498837 PRSS45Q7RTY3 260 aa11.9□□□□□ -0.5
SEC61A1-207ENST00000498837 SLC37A3Q8NCC5 494 aa11.9□□□□□ -0.5
SEC61A1-207ENST00000498837 OR10Z1Q8NGY1 313 aa11.9□□□□□ -0.5
SEC61A1-207ENST00000498837 PIFOQ8TCI5 191 aa11.9□□□□□ -0.5
SEC61A1-207ENST00000498837 GNPDA2Q8TDQ7 276 aa11.9□□□□□ -0.5
SEC61A1-207ENST00000498837 R3HDM4Q96D70 268 aa11.9□□□□□ -0.5
SEC61A1-207ENST00000498837 NKX3-1Q99801 234 aaPredicted RBP11.9□□□□□ -0.5
SEC61A1-207ENST00000498837 EFCAB1Q9HAE3 211 aa11.9□□□□□ -0.5
SEC61A1-207ENST00000498837 ABCD2Q9UBJ2 740 aa11.9□□□□□ -0.5
SEC61A1-207ENST00000498837 SAMD4AQ9UPU9 718 aaKnown RBP11.9□□□□□ -0.5
SEC61A1-207ENST00000498837 DHRS12A0PJE2 317 aa11.89□□□□□ -0.51
SEC61A1-207ENST00000498837 ADARB2-AS1A8MUL3 147 aa11.89□□□□□ -0.51
SEC61A1-207ENST00000498837 H0YAE9 185 aa11.89□□□□□ -0.51
SEC61A1-207ENST00000498837 SIGLEC5O15389 551 aa11.89□□□□□ -0.51
SEC61A1-207ENST00000498837 FBXO24O75426 580 aa11.89□□□□□ -0.51
SEC61A1-207ENST00000498837 SEMG1P04279 462 aa11.89□□□□□ -0.51
SEC61A1-207ENST00000498837 ACAA1P09110 424 aaPredicted RBP11.89□□□□□ -0.51
SEC61A1-207ENST00000498837 FMO3P31513 532 aa11.89□□□□□ -0.51
SEC61A1-207ENST00000498837 GNALP38405 381 aa11.89□□□□□ -0.51
SEC61A1-207ENST00000498837 NUDT2P50583 147 aa11.89□□□□□ -0.51
SEC61A1-207ENST00000498837 BMXP51813 675 aa11.89□□□□□ -0.51
SEC61A1-207ENST00000498837 EMX1Q04741 257 aaPredicted RBP11.89□□□□□ -0.51
SEC61A1-207ENST00000498837 BLMHQ13867 455 aa11.89□□□□□ -0.51
SEC61A1-207ENST00000498837 GFOD2Q3B7J2 385 aa11.89□□□□□ -0.51
SEC61A1-207ENST00000498837 FOXB2Q5VYV0 432 aa11.89□□□□□ -0.51
SEC61A1-207ENST00000498837 HACD2Q6Y1H2 254 aa11.89□□□□□ -0.51
SEC61A1-207ENST00000498837 ZNRF1Q8ND25 227 aa11.89□□□□□ -0.51
SEC61A1-207ENST00000498837 OR4S1Q8NGB4 309 aa11.89□□□□□ -0.51
SEC61A1-207ENST00000498837 MICU1Q9BPX6 476 aa11.89□□□□□ -0.51
SEC61A1-207ENST00000498837 FGF23Q9GZV9 251 aaPredicted RBP11.89□□□□□ -0.51
SEC61A1-207ENST00000498837 ZNF702PQ9H963 129 aa11.89□□□□□ -0.51
SEC61A1-207ENST00000498837 RAB18Q9NP72 206 aa11.89□□□□□ -0.51
SEC61A1-207ENST00000498837 BRD7Q9NPI1 651 aa11.89□□□□□ -0.51
SEC61A1-207ENST00000498837 SERTAD4Q9NUC0 356 aa11.89□□□□□ -0.51
SEC61A1-207ENST00000498837 DNAJC27Q9NZQ0 273 aa11.89□□□□□ -0.51
SEC61A1-207ENST00000498837 OR2AT4A6NND4 320 aa11.88□□□□□ -0.51
SEC61A1-207ENST00000498837 ZNF850A8MQ14 1090 aa11.88□□□□□ -0.51
SEC61A1-207ENST00000498837 CLUP10909 449 aa11.88□□□□□ -0.51
SEC61A1-207ENST00000498837 HSD11B1P28845 292 aa11.88□□□□□ -0.51
SEC61A1-207ENST00000498837 RRM2P31350 389 aa11.88□□□□□ -0.51
SEC61A1-207ENST00000498837 SLC15A1P46059 708 aa11.88□□□□□ -0.51
SEC61A1-207ENST00000498837 GABRA2P47869 451 aa11.88□□□□□ -0.51
SEC61A1-207ENST00000498837 PSME3P61289 254 aa11.88□□□□□ -0.51
SEC61A1-207ENST00000498837 GRB2P62993 217 aaKnown RBP11.88□□□□□ -0.51
SEC61A1-207ENST00000498837 PRDX4Q13162 271 aa11.88□□□□□ -0.51
SEC61A1-207ENST00000498837 EIF2B1Q14232 305 aaKnown RBP11.88□□□□□ -0.51
SEC61A1-207ENST00000498837 TEX30Q5JUR7 227 aa11.88□□□□□ -0.51
SEC61A1-207ENST00000498837 VAX1Q5SQQ9 334 aa11.88□□□□□ -0.51
SEC61A1-207ENST00000498837 MKXQ8IYA7 352 aa11.88□□□□□ -0.51
SEC61A1-207ENST00000498837 FAM185AQ8N0U4 392 aa11.88□□□□□ -0.51
SEC61A1-207ENST00000498837 RNF148Q8N7C7 305 aa11.88□□□□□ -0.51
SEC61A1-207ENST00000498837 CSNK2A3Q8NEV1 391 aa11.88□□□□□ -0.51
SEC61A1-207ENST00000498837 OR52L1Q8NGH7 329 aa11.88□□□□□ -0.51
SEC61A1-207ENST00000498837 OR5D13Q8NGL4 314 aa11.88□□□□□ -0.51
SEC61A1-207ENST00000498837 OR8D4Q8NGM9 314 aa11.88□□□□□ -0.51
SEC61A1-207ENST00000498837 PYURFQ96I23 114 aa11.88□□□□□ -0.51
SEC61A1-207ENST00000498837 RTL8AQ9BWD3 113 aa11.88□□□□□ -0.51
SEC61A1-207ENST00000498837 NPFFR1Q9GZQ6 430 aa11.88□□□□□ -0.51
SEC61A1-207ENST00000498837 NLKQ9UBE8 527 aa11.88□□□□□ -0.51
SEC61A1-207ENST00000498837 CD300AQ9UGN4 299 aa11.88□□□□□ -0.51
SEC61A1-207ENST00000498837 CDH10Q9Y6N8 788 aa11.88□□□□□ -0.51
SEC61A1-207ENST00000498837 IGKV1D-17A0A075B6S4 117 aa11.87□□□□□ -0.51
SEC61A1-207ENST00000498837 ANXA2P2A6NMY6 339 aa11.87□□□□□ -0.51
SEC61A1-207ENST00000498837 NDUFAB1O14561 156 aa11.87□□□□□ -0.51
SEC61A1-207ENST00000498837 MPIG6BO95866 241 aa11.87□□□□□ -0.51
SEC61A1-207ENST00000498837 SPI1P17947 270 aa11.87□□□□□ -0.51
SEC61A1-207ENST00000498837 ACKR3P25106 362 aa11.87□□□□□ -0.51
SEC61A1-207ENST00000498837 DCTDP32321 178 aa11.87□□□□□ -0.51
SEC61A1-207ENST00000498837 IFNGR2P38484 337 aa11.87□□□□□ -0.51
SEC61A1-207ENST00000498837 ZNF121P58317 390 aaPredicted RBP11.87□□□□□ -0.51
SEC61A1-207ENST00000498837 IL5RAQ01344 420 aa11.87□□□□□ -0.51
SEC61A1-207ENST00000498837 CRMP1Q14194 572 aa11.87□□□□□ -0.51
SEC61A1-207ENST00000498837 AANATQ16613 207 aa11.87□□□□□ -0.51
SEC61A1-207ENST00000498837 FAM76BQ5HYJ3 339 aa11.87□□□□□ -0.51
SEC61A1-207ENST00000498837 KCTD8Q6ZWB6 473 aa11.87□□□□□ -0.51
SEC61A1-207ENST00000498837 OR5P3Q8WZ94 311 aa11.87□□□□□ -0.51
SEC61A1-207ENST00000498837 RNF170Q96K19 258 aa11.87□□□□□ -0.51
SEC61A1-207ENST00000498837 AMELYQ99218 206 aa11.87□□□□□ -0.51
SEC61A1-207ENST00000498837 CITED2Q99967 270 aaPredicted RBP11.87□□□□□ -0.51
SEC61A1-207ENST00000498837 NMNAT2Q9BZQ4 307 aa11.87□□□□□ -0.51
SEC61A1-207ENST00000498837 SP140LQ9H930 580 aa11.87□□□□□ -0.51
SEC61A1-207ENST00000498837 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.87□□□□□ -0.51
SEC61A1-207ENST00000498837 IL20Q9NYY1 176 aa11.87□□□□□ -0.51
SEC61A1-207ENST00000498837 MPC1Q9Y5U8 109 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms