RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 NPFFR1Q9GZQ6 430 aa11.94□□□□□ -0.5
TRAF4-212ENST00000498540 MEGF9Q9H1U4 602 aa11.94□□□□□ -0.5
TRAF4-212ENST00000498540 RAB18Q9NP72 206 aa11.94□□□□□ -0.5
TRAF4-212ENST00000498540 SF3B6Q9Y3B4 125 aaKnown RBP11.94□□□□□ -0.5
TRAF4-212ENST00000498540 DHRS12A0PJE2 317 aa11.93□□□□□ -0.5
TRAF4-212ENST00000498540 ADARB2-AS1A8MUL3 147 aa11.93□□□□□ -0.5
TRAF4-212ENST00000498540 ZNF593O00488 134 aaPredicted RBP11.93□□□□□ -0.5
TRAF4-212ENST00000498540 SIGLEC5O15389 551 aa11.93□□□□□ -0.5
TRAF4-212ENST00000498540 AKR7A2O43488 359 aa11.93□□□□□ -0.5
TRAF4-212ENST00000498540 SEMG1P04279 462 aa11.93□□□□□ -0.5
TRAF4-212ENST00000498540 GYPBP06028 91 aa11.93□□□□□ -0.5
TRAF4-212ENST00000498540 POU1F1P28069 291 aa11.93□□□□□ -0.5
TRAF4-212ENST00000498540 GNALP38405 381 aa11.93□□□□□ -0.5
TRAF4-212ENST00000498540 GSK3AP49840 483 aa11.93□□□□□ -0.5
TRAF4-212ENST00000498540 BMXP51813 675 aa11.93□□□□□ -0.5
TRAF4-212ENST00000498540 CAV3P56539 151 aa11.93□□□□□ -0.5
TRAF4-212ENST00000498540 BLMHQ13867 455 aa11.93□□□□□ -0.5
TRAF4-212ENST00000498540 GFOD2Q3B7J2 385 aa11.93□□□□□ -0.5
TRAF4-212ENST00000498540 VAX1Q5SQQ9 334 aa11.93□□□□□ -0.5
TRAF4-212ENST00000498540 ZBTB37Q5TC79 503 aa11.93□□□□□ -0.5
TRAF4-212ENST00000498540 FOXB2Q5VYV0 432 aa11.93□□□□□ -0.5
TRAF4-212ENST00000498540 GLYATQ6IB77 296 aa11.93□□□□□ -0.5
TRAF4-212ENST00000498540 FAM57BQ71RH2 274 aa11.93□□□□□ -0.5
TRAF4-212ENST00000498540 PRSS45Q7RTY3 260 aa11.93□□□□□ -0.5
TRAF4-212ENST00000498540 SLC37A3Q8NCC5 494 aa11.93□□□□□ -0.5
TRAF4-212ENST00000498540 OR10Z1Q8NGY1 313 aa11.93□□□□□ -0.5
TRAF4-212ENST00000498540 PIFOQ8TCI5 191 aa11.93□□□□□ -0.5
TRAF4-212ENST00000498540 R3HDM4Q96D70 268 aa11.93□□□□□ -0.5
TRAF4-212ENST00000498540 MED30Q96HR3 178 aa11.93□□□□□ -0.5
TRAF4-212ENST00000498540 NKX3-1Q99801 234 aaPredicted RBP11.93□□□□□ -0.5
TRAF4-212ENST00000498540 MICU1Q9BPX6 476 aa11.93□□□□□ -0.5
TRAF4-212ENST00000498540 FGF23Q9GZV9 251 aaPredicted RBP11.93□□□□□ -0.5
TRAF4-212ENST00000498540 ZNF702PQ9H963 129 aa11.93□□□□□ -0.5
TRAF4-212ENST00000498540 SERTAD4Q9NUC0 356 aa11.93□□□□□ -0.5
TRAF4-212ENST00000498540 ZNF319Q9P2F9 582 aa11.93□□□□□ -0.5
TRAF4-212ENST00000498540 ABCD2Q9UBJ2 740 aa11.93□□□□□ -0.5
TRAF4-212ENST00000498540 SAMD4AQ9UPU9 718 aaKnown RBP11.93□□□□□ -0.5
TRAF4-212ENST00000498540 H0YAE9 185 aa11.92□□□□□ -0.5
TRAF4-212ENST00000498540 ACAA1P09110 424 aaPredicted RBP11.92□□□□□ -0.5
TRAF4-212ENST00000498540 NUDT2P50583 147 aa11.92□□□□□ -0.5
TRAF4-212ENST00000498540 SMIM11AP58511 58 aa11.92□□□□□ -0.5
TRAF4-212ENST00000498540 GRB2P62993 217 aaKnown RBP11.92□□□□□ -0.5
TRAF4-212ENST00000498540 TSPAN31Q12999 210 aa11.92□□□□□ -0.5
TRAF4-212ENST00000498540 AANATQ16613 207 aa11.92□□□□□ -0.5
TRAF4-212ENST00000498540 C11orf87Q6NUJ2 197 aa11.92□□□□□ -0.5
TRAF4-212ENST00000498540 MKXQ8IYA7 352 aa11.92□□□□□ -0.5
TRAF4-212ENST00000498540 OR5D13Q8NGL4 314 aa11.92□□□□□ -0.5
TRAF4-212ENST00000498540 OR8D4Q8NGM9 314 aa11.92□□□□□ -0.5
TRAF4-212ENST00000498540 RTL8AQ9BWD3 113 aa11.92□□□□□ -0.5
TRAF4-212ENST00000498540 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.92□□□□□ -0.5
TRAF4-212ENST00000498540 DNAJC27Q9NZQ0 273 aa11.92□□□□□ -0.5
TRAF4-212ENST00000498540 CDH10Q9Y6N8 788 aa11.92□□□□□ -0.5
TRAF4-212ENST00000498540 IGKV1D-17A0A075B6S4 117 aa11.91□□□□□ -0.5
TRAF4-212ENST00000498540 ANXA2P2A6NMY6 339 aa11.91□□□□□ -0.5
TRAF4-212ENST00000498540 OR2AT4A6NND4 320 aa11.91□□□□□ -0.5
TRAF4-212ENST00000498540 MPIG6BO95866 241 aa11.91□□□□□ -0.5
TRAF4-212ENST00000498540 CLUP10909 449 aa11.91□□□□□ -0.5
TRAF4-212ENST00000498540 ACKR3P25106 362 aa11.91□□□□□ -0.5
TRAF4-212ENST00000498540 HSD11B1P28845 292 aa11.91□□□□□ -0.5
TRAF4-212ENST00000498540 RRM2P31350 389 aa11.91□□□□□ -0.5
TRAF4-212ENST00000498540 FMO3P31513 532 aa11.91□□□□□ -0.5
TRAF4-212ENST00000498540 SLC15A1P46059 708 aa11.91□□□□□ -0.5
TRAF4-212ENST00000498540 GABRA2P47869 451 aa11.91□□□□□ -0.5
TRAF4-212ENST00000498540 ZNF121P58317 390 aaPredicted RBP11.91□□□□□ -0.5
TRAF4-212ENST00000498540 IL5RAQ01344 420 aa11.91□□□□□ -0.5
TRAF4-212ENST00000498540 EMX1Q04741 257 aaPredicted RBP11.91□□□□□ -0.5
TRAF4-212ENST00000498540 PRDX4Q13162 271 aa11.91□□□□□ -0.5
TRAF4-212ENST00000498540 TEX30Q5JUR7 227 aa11.91□□□□□ -0.5
TRAF4-212ENST00000498540 HACD2Q6Y1H2 254 aa11.91□□□□□ -0.5
TRAF4-212ENST00000498540 NDUFA11Q86Y39 141 aa11.91□□□□□ -0.5
TRAF4-212ENST00000498540 FAM185AQ8N0U4 392 aa11.91□□□□□ -0.5
TRAF4-212ENST00000498540 ZNRF1Q8ND25 227 aa11.91□□□□□ -0.5
TRAF4-212ENST00000498540 CSNK2A3Q8NEV1 391 aa11.91□□□□□ -0.5
TRAF4-212ENST00000498540 OR52L1Q8NGH7 329 aa11.91□□□□□ -0.5
TRAF4-212ENST00000498540 GNPDA2Q8TDQ7 276 aa11.91□□□□□ -0.5
TRAF4-212ENST00000498540 WIPF2Q8TF74 440 aaPredicted RBP11.91□□□□□ -0.5
TRAF4-212ENST00000498540 HPSE2Q8WWQ2 592 aa11.91□□□□□ -0.5
TRAF4-212ENST00000498540 OR5P3Q8WZ94 311 aa11.91□□□□□ -0.5
TRAF4-212ENST00000498540 CITED2Q99967 270 aaPredicted RBP11.91□□□□□ -0.5
TRAF4-212ENST00000498540 EFCAB1Q9HAE3 211 aa11.91□□□□□ -0.5
TRAF4-212ENST00000498540 BRD7Q9NPI1 651 aa11.91□□□□□ -0.5
TRAF4-212ENST00000498540 C19orf12Q9NSK7 152 aa11.91□□□□□ -0.5
TRAF4-212ENST00000498540 NLKQ9UBE8 527 aa11.91□□□□□ -0.5
TRAF4-212ENST00000498540 CD300AQ9UGN4 299 aa11.91□□□□□ -0.5
TRAF4-212ENST00000498540 RYR3Q15413 4870 aa11.91□□□□□ -0.5
TRAF4-212ENST00000498540 TMEM210A6NLX4 147 aa11.9□□□□□ -0.5
TRAF4-212ENST00000498540 ZNF850A8MQ14 1090 aa11.9□□□□□ -0.5
TRAF4-212ENST00000498540 NDUFAB1O14561 156 aa11.9□□□□□ -0.5
TRAF4-212ENST00000498540 RHBDL1O75783 438 aa11.9□□□□□ -0.5
TRAF4-212ENST00000498540 SPI1P17947 270 aa11.9□□□□□ -0.5
TRAF4-212ENST00000498540 CFL1P23528 166 aaKnown RBP11.9□□□□□ -0.5
TRAF4-212ENST00000498540 DCTDP32321 178 aa11.9□□□□□ -0.5
TRAF4-212ENST00000498540 IFNGR2P38484 337 aa11.9□□□□□ -0.5
TRAF4-212ENST00000498540 PSME3P61289 254 aa11.9□□□□□ -0.5
TRAF4-212ENST00000498540 CRMP1Q14194 572 aa11.9□□□□□ -0.5
TRAF4-212ENST00000498540 EIF2B1Q14232 305 aaKnown RBP11.9□□□□□ -0.5
TRAF4-212ENST00000498540 LIAT1Q6ZQX7 453 aa11.9□□□□□ -0.5
TRAF4-212ENST00000498540 KCTD8Q6ZWB6 473 aa11.9□□□□□ -0.5
TRAF4-212ENST00000498540 Q8N2B8 174 aa11.9□□□□□ -0.5
TRAF4-212ENST00000498540 RNF148Q8N7C7 305 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms