RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 DNAJC27Q9NZQ0 273 aa9.88□□□□□ -0.83
CNOT4-211ENST00000498534 ZNRD1Q9P1U0 126 aa9.88□□□□□ -0.83
CNOT4-211ENST00000498534 RHBDD3Q9Y3P4 386 aa9.88□□□□□ -0.83
CNOT4-211ENST00000498534 MPC1Q9Y5U8 109 aa9.88□□□□□ -0.83
CNOT4-211ENST00000498534 A0A1B0GW55 424 aa9.87□□□□□ -0.83
CNOT4-211ENST00000498534 A0A1W2PRD5 423 aa9.87□□□□□ -0.83
CNOT4-211ENST00000498534 A0A1W2PRF3 423 aa9.87□□□□□ -0.83
CNOT4-211ENST00000498534 A0A1W2PRM7 423 aa9.87□□□□□ -0.83
CNOT4-211ENST00000498534 MEIOCA2RUB1 952 aa9.87□□□□□ -0.83
CNOT4-211ENST00000498534 NKX6-3A6NJ46 265 aa9.87□□□□□ -0.83
CNOT4-211ENST00000498534 TMEM210A6NLX4 147 aa9.87□□□□□ -0.83
CNOT4-211ENST00000498534 RNASEK-C17orf49H0YIS7 233 aa9.87□□□□□ -0.83
CNOT4-211ENST00000498534 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.87□□□□□ -0.83
CNOT4-211ENST00000498534 CSF1P09603 554 aa9.87□□□□□ -0.83
CNOT4-211ENST00000498534 H2BFMP0C1H6 154 aa9.87□□□□□ -0.83
CNOT4-211ENST00000498534 DUX4L2P0CJ85 424 aa9.87□□□□□ -0.83
CNOT4-211ENST00000498534 DUX4L3P0CJ86 424 aa9.87□□□□□ -0.83
CNOT4-211ENST00000498534 DUX4L4P0CJ87 422 aa9.87□□□□□ -0.83
CNOT4-211ENST00000498534 DUX4L5P0CJ88 424 aa9.87□□□□□ -0.83
CNOT4-211ENST00000498534 DUX4L6P0CJ89 424 aa9.87□□□□□ -0.83
CNOT4-211ENST00000498534 DUX4L7P0CJ90 424 aa9.87□□□□□ -0.83
CNOT4-211ENST00000498534 CLUP10909 449 aa9.87□□□□□ -0.83
CNOT4-211ENST00000498534 GSTT1P30711 240 aa9.87□□□□□ -0.83
CNOT4-211ENST00000498534 UBE2E1P51965 193 aa9.87□□□□□ -0.83
CNOT4-211ENST00000498534 ZNF121P58317 390 aaPredicted RBP9.87□□□□□ -0.83
CNOT4-211ENST00000498534 GMFBP60983 142 aa9.87□□□□□ -0.83
CNOT4-211ENST00000498534 ELF3P78545 371 aaPredicted RBP9.87□□□□□ -0.83
CNOT4-211ENST00000498534 MXRA7P84157 204 aa9.87□□□□□ -0.83
CNOT4-211ENST00000498534 EGR3Q06889 387 aa9.87□□□□□ -0.83
CNOT4-211ENST00000498534 ACSM1Q08AH1 577 aa9.87□□□□□ -0.83
CNOT4-211ENST00000498534 LCE2AQ5TA79 106 aaPredicted RBP9.87□□□□□ -0.83
CNOT4-211ENST00000498534 NCR3LG1Q68D85 454 aa9.87□□□□□ -0.83
CNOT4-211ENST00000498534 SLC35E4Q6ICL7 350 aa9.87□□□□□ -0.83
CNOT4-211ENST00000498534 ZNF770Q6IQ21 691 aaPredicted RBP9.87□□□□□ -0.83
CNOT4-211ENST00000498534 DUX4L9Q6RFH8 374 aaPredicted RBP9.87□□□□□ -0.83
CNOT4-211ENST00000498534 C16orf89Q6UX73 402 aa9.87□□□□□ -0.83
CNOT4-211ENST00000498534 KCTD8Q6ZWB6 473 aa9.87□□□□□ -0.83
CNOT4-211ENST00000498534 ERI1Q8IV48 349 aaKnown RBP9.87□□□□□ -0.83
CNOT4-211ENST00000498534 TIGD4Q8IY51 512 aa9.87□□□□□ -0.83
CNOT4-211ENST00000498534 OR8D4Q8NGM9 314 aa9.87□□□□□ -0.83
CNOT4-211ENST00000498534 OR6N2Q8NGY6 317 aa9.87□□□□□ -0.83
CNOT4-211ENST00000498534 C8orf46Q8TAG6 207 aa9.87□□□□□ -0.83
CNOT4-211ENST00000498534 RNF133Q8WVZ7 376 aa9.87□□□□□ -0.83
CNOT4-211ENST00000498534 SEH1LQ96EE3 360 aa9.87□□□□□ -0.83
CNOT4-211ENST00000498534 FAM107BQ9H098 131 aa9.87□□□□□ -0.83
CNOT4-211ENST00000498534 FAM234AQ9H0X4 552 aa9.87□□□□□ -0.83
CNOT4-211ENST00000498534 TLNRD1Q9H1K6 362 aa9.87□□□□□ -0.83
CNOT4-211ENST00000498534 SEMA6AQ9H2E6 1030 aa9.87□□□□□ -0.83
CNOT4-211ENST00000498534 METTL8Q9H825 291 aaKnown RBP9.87□□□□□ -0.83
CNOT4-211ENST00000498534 DUX4Q9UBX2 424 aa9.87□□□□□ -0.83
CNOT4-211ENST00000498534 ZNF391Q9UJN7 358 aa9.87□□□□□ -0.83
CNOT4-211ENST00000498534 hCG_38984A0A1B0GV85 526 aa9.86□□□□□ -0.83
CNOT4-211ENST00000498534 A0A1W2PQ09 198 aa9.86□□□□□ -0.83
CNOT4-211ENST00000498534 ZNF850A8MQ14 1090 aa9.86□□□□□ -0.83
CNOT4-211ENST00000498534 M0R1W7 72 aa9.86□□□□□ -0.83
CNOT4-211ENST00000498534 SOX14O95416 240 aa9.86□□□□□ -0.83
CNOT4-211ENST00000498534 TSPAN15O95858 294 aa9.86□□□□□ -0.83
CNOT4-211ENST00000498534 NDUFB7P17568 137 aa9.86□□□□□ -0.83
CNOT4-211ENST00000498534 GABRA5P31644 462 aa9.86□□□□□ -0.83
CNOT4-211ENST00000498534 SAA4P35542 130 aa9.86□□□□□ -0.83
CNOT4-211ENST00000498534 PRKDCP78527 4128 aaKnown RBP9.86□□□□□ -0.83
CNOT4-211ENST00000498534 PRB3Q04118 309 aaPredicted RBP9.86□□□□□ -0.83
CNOT4-211ENST00000498534 PRDX4Q13162 271 aa9.86□□□□□ -0.83
CNOT4-211ENST00000498534 MICAQ29983 383 aa9.86□□□□□ -0.83
CNOT4-211ENST00000498534 LINC01590Q5TEZ4 76 aa9.86□□□□□ -0.83
CNOT4-211ENST00000498534 STUMQ69YW2 141 aa9.86□□□□□ -0.83
CNOT4-211ENST00000498534 CYP2R1Q6VVX0 501 aa9.86□□□□□ -0.83
CNOT4-211ENST00000498534 Q6ZTK2 550 aa9.86□□□□□ -0.83
CNOT4-211ENST00000498534 PRSS45Q7RTY3 260 aa9.86□□□□□ -0.83
CNOT4-211ENST00000498534 C1QL4Q86Z23 238 aa9.86□□□□□ -0.83
CNOT4-211ENST00000498534 DEFB107AQ8IZN7 70 aa9.86□□□□□ -0.83
CNOT4-211ENST00000498534 Q8N7P7 452 aa9.86□□□□□ -0.83
CNOT4-211ENST00000498534 DTX3Q8N9I9 347 aa9.86□□□□□ -0.83
CNOT4-211ENST00000498534 PAPD5Q8NDF8 572 aaKnown RBP9.86□□□□□ -0.83
CNOT4-211ENST00000498534 OR4Q3Q8NH05 313 aa9.86□□□□□ -0.83
CNOT4-211ENST00000498534 PIGCQ92535 297 aa9.86□□□□□ -0.83
CNOT4-211ENST00000498534 RPL3LQ92901 407 aaKnown RBP9.86□□□□□ -0.83
CNOT4-211ENST00000498534 RNF170Q96K19 258 aa9.86□□□□□ -0.83
CNOT4-211ENST00000498534 RAB3IPQ96QF0 476 aaPredicted RBP9.86□□□□□ -0.83
CNOT4-211ENST00000498534 PPA2Q9H2U2 334 aa9.86□□□□□ -0.83
CNOT4-211ENST00000498534 PPP1R3EQ9H7J1 279 aa9.86□□□□□ -0.83
CNOT4-211ENST00000498534 REEP1Q9H902 201 aa9.86□□□□□ -0.83
CNOT4-211ENST00000498534 SNTG1Q9NSN8 517 aa9.86□□□□□ -0.83
CNOT4-211ENST00000498534 SLC25A10Q9UBX3 287 aaPredicted RBP9.86□□□□□ -0.83
CNOT4-211ENST00000498534 FBLN5Q9UBX5 448 aa9.86□□□□□ -0.83
CNOT4-211ENST00000498534 TAGLN3Q9UI15 199 aa9.86□□□□□ -0.83
CNOT4-211ENST00000498534 SF3B6Q9Y3B4 125 aaKnown RBP9.86□□□□□ -0.83
CNOT4-211ENST00000498534 H0YAE9 185 aa9.85□□□□□ -0.83
CNOT4-211ENST00000498534 SNX3O60493 162 aa9.85□□□□□ -0.83
CNOT4-211ENST00000498534 GLCEO94923 617 aa9.85□□□□□ -0.83
CNOT4-211ENST00000498534 CST4P01036 141 aa9.85□□□□□ -0.83
CNOT4-211ENST00000498534 ACAA1P09110 424 aaPredicted RBP9.85□□□□□ -0.83
CNOT4-211ENST00000498534 AMY2BP19961 511 aa9.85□□□□□ -0.83
CNOT4-211ENST00000498534 PAICSP22234 425 aaKnown RBP9.85□□□□□ -0.83
CNOT4-211ENST00000498534 OPRL1P41146 370 aa9.85□□□□□ -0.83
CNOT4-211ENST00000498534 GABRA2P47869 451 aa9.85□□□□□ -0.83
CNOT4-211ENST00000498534 MNAT1P51948 309 aa9.85□□□□□ -0.83
CNOT4-211ENST00000498534 CAV3P56539 151 aa9.85□□□□□ -0.83
CNOT4-211ENST00000498534 PPP1R8Q12972 351 aaKnown RBP9.85□□□□□ -0.83
CNOT4-211ENST00000498534 C11orf88Q6PI97 169 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms