RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 ACER3Q9NUN7 267 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 SDAD1Q9NVU7 687 aaKnown RBP eCLIP1.94□□□□□ -2.1
RIF1-212ENST00000498041 PDP1Q9P0J1 537 aaPredicted RBP1.94□□□□□ -2.1
RIF1-212ENST00000498041 STX18Q9P2W9 335 aaKnown RBP1.94□□□□□ -2.1
RIF1-212ENST00000498041 RPS6KB2Q9UBS0 482 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 SNX6Q9UNH7 406 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 AP4S1Q9Y587 144 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 AP4B1Q9Y6B7 739 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 AP1M2Q9Y6Q5 423 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 ARHGAP21Q5T5U3 1957 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 PRUNE2Q8WUY3 3088 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 ABCA2Q9BZC7 2435 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 CDH23Q9H251 3354 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 LAMA3Q16787 3333 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 PCNX2A6NKB5 2137 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 GTF3C1Q12789 2109 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 SETD2Q9BYW2 2564 aaPredicted RBP1.93□□□□□ -2.1
RIF1-212ENST00000498041 IGKV1D-43A0A0B4J1Z2 117 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 DHRS12A0PJE2 317 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 A6NIN4 97 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 FAM183AA6NL82 134 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 E9PLD3 99 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 H7C1C5 153 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 FOXE1O00358 373 aaPredicted RBP1.93□□□□□ -2.1
RIF1-212ENST00000498041 CASQ2O14958 399 aaPredicted RBP1.93□□□□□ -2.1
RIF1-212ENST00000498041 RTL8CO15255 209 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 CLOCKO15516 846 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 PPIHO43447 177 aaKnown RBP1.93□□□□□ -2.1
RIF1-212ENST00000498041 PRKYO43930 277 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 CDC40O60508 579 aaKnown RBP eCLIP1.93□□□□□ -2.1
RIF1-212ENST00000498041 WBP4O75554 376 aaKnown RBP1.93□□□□□ -2.1
RIF1-212ENST00000498041 CIB2O75838 187 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 NDUFA7O95182 113 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 MPZL1O95297 269 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 IL6P05231 212 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 GYPBP06028 91 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 HOXC4P09017 264 aaPredicted RBP1.93□□□□□ -2.1
RIF1-212ENST00000498041 PRPS2P11908 318 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 UQCRBP14927 111 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 TNNI3P19429 210 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 TBXA2RP21731 343 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 UQCRC2P22695 453 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 TEAD1P28347 426 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 GCKP35557 465 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 CHI3L1P36222 383 aaPredicted RBP1.93□□□□□ -2.1
RIF1-212ENST00000498041 VHLP40337 213 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 ACAA2P42765 397 aaKnown RBP1.93□□□□□ -2.1
RIF1-212ENST00000498041 GPR4P46093 362 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 RABIFP47224 123 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 MRPL19P49406 292 aaKnown RBP1.93□□□□□ -2.1
RIF1-212ENST00000498041 ACADVLP49748 655 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 HNMTP50135 292 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 AP1S2P56377 157 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 CAV3P56539 151 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 C21orf59P57076 290 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 FBXW4P57775 412 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 DSTNP60981 165 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 LCN6P62502 163 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 CDK6Q00534 326 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 SIGLEC14Q08ET2 396 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 STX5Q13190 355 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 PDK3Q15120 406 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 ANKDD1AQ495B1 522 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 OR2B11Q5JQS5 317 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 PHYHD1Q5SRE7 291 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 DCST2Q5T1A1 773 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 PDZK1Q5T2W1 519 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 XAF1Q6GPH4 301 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 SLC48A1Q6P1K1 146 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 ARSKQ6UWY0 536 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 PLEKHG7Q6ZR37 379 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 LPCAT2Q7L5N7 544 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 SSX6Q7RTT6 188 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 RABEPKQ7Z6M1 372 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 ZDHHC21Q8IVQ6 265 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 TCAIMQ8N3R3 496 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 BCORP1Q8N888 145 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 ZNF615Q8N8J6 731 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 NFAM1Q8NET5 270 aaPredicted RBP1.93□□□□□ -2.1
RIF1-212ENST00000498041 ZNF721Q8TF20 911 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 CYGBQ8WWM9 190 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 FGF11Q92914 225 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 MCHR2Q969V1 340 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 TESCQ96BS2 214 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 ROPN1LQ96C74 230 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 SLC25A36Q96CQ1 311 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 CMTM5Q96DZ9 223 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 DUS3LQ96G46 650 aaKnown RBP1.93□□□□□ -2.1
RIF1-212ENST00000498041 RMND5BQ96G75 393 aaPredicted RBP1.93□□□□□ -2.1
RIF1-212ENST00000498041 TMEM80Q96HE8 168 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 SLC35G5Q96KT7 338 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 SAMD8Q96LT4 415 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 NSMCE2Q96MF7 247 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 FOPNLQ96NB1 174 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 COL21A1Q96P44 957 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 SDF2Q99470 211 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 SERPINI1Q99574 410 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 OSBPL10Q9BXB5 764 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 GSDMCQ9BYG8 508 aa1.93□□□□□ -2.1
RIF1-212ENST00000498041 OR11A1Q9GZK7 315 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms