RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 PDPNQ86YL7 162 aa1.67□□□□□ -2.14
PSPC1-205ENST00000497722 APRG1Q8IVJ8 170 aa1.67□□□□□ -2.14
PSPC1-205ENST00000497722 TRAM1L1Q8N609 369 aa1.67□□□□□ -2.14
PSPC1-205ENST00000497722 SLC35G3Q8N808 338 aa1.67□□□□□ -2.14
PSPC1-205ENST00000497722 WDR31Q8NA23 367 aa1.67□□□□□ -2.14
PSPC1-205ENST00000497722 OR5AR1Q8NGP9 310 aa1.67□□□□□ -2.14
PSPC1-205ENST00000497722 SFXN5Q8TD22 340 aa1.67□□□□□ -2.14
PSPC1-205ENST00000497722 PIH1D2Q8WWB5 315 aa1.67□□□□□ -2.14
PSPC1-205ENST00000497722 ISOC2Q96AB3 205 aa1.67□□□□□ -2.14
PSPC1-205ENST00000497722 YIPF6Q96EC8 236 aa1.67□□□□□ -2.14
PSPC1-205ENST00000497722 LHX5Q9H2C1 402 aa1.67□□□□□ -2.14
PSPC1-205ENST00000497722 REEP1Q9H902 201 aa1.67□□□□□ -2.14
PSPC1-205ENST00000497722 LYRM4Q9HD34 91 aa1.67□□□□□ -2.14
PSPC1-205ENST00000497722 DAZ1Q9NQZ3 744 aaKnown RBP1.67□□□□□ -2.14
PSPC1-205ENST00000497722 AHSPQ9NZD4 102 aa1.67□□□□□ -2.14
PSPC1-205ENST00000497722 ZNF230Q9UIE0 474 aaPredicted RBP1.67□□□□□ -2.14
PSPC1-205ENST00000497722 INSRP06213 1382 aa1.67□□□□□ -2.14
PSPC1-205ENST00000497722 HMCN1Q96RW7 5635 aa1.66□□□□□ -2.14
PSPC1-205ENST00000497722 A0A0A6YYD5 115 aa1.66□□□□□ -2.14
PSPC1-205ENST00000497722 ARPC4-TTLL3A0A0A6YYG9 625 aa1.66□□□□□ -2.14
PSPC1-205ENST00000497722 KIR2DS1A0A191URI9 304 aa1.66□□□□□ -2.14
PSPC1-205ENST00000497722 SCELO95171 688 aa1.66□□□□□ -2.14
PSPC1-205ENST00000497722 LHBP01229 141 aa1.66□□□□□ -2.14
PSPC1-205ENST00000497722 TRBV12-3P01733 135 aa1.66□□□□□ -2.14
PSPC1-205ENST00000497722 CATP04040 527 aaKnown RBP1.66□□□□□ -2.14
PSPC1-205ENST00000497722 CDK1P06493 297 aa1.66□□□□□ -2.14
PSPC1-205ENST00000497722 GFAPP14136 432 aa1.66□□□□□ -2.14
PSPC1-205ENST00000497722 PMCHP20382 165 aa1.66□□□□□ -2.14
PSPC1-205ENST00000497722 CD82P27701 267 aa1.66□□□□□ -2.14
PSPC1-205ENST00000497722 RPS5P46782 204 aaKnown RBP1.66□□□□□ -2.14
PSPC1-205ENST00000497722 PSMB2P49721 201 aa1.66□□□□□ -2.14
PSPC1-205ENST00000497722 OR2B8PP59922 312 aa1.66□□□□□ -2.14
PSPC1-205ENST00000497722 OR1Q1Q15612 314 aa1.66□□□□□ -2.14
PSPC1-205ENST00000497722 TAF9Q16594 264 aa1.66□□□□□ -2.14
PSPC1-205ENST00000497722 C16orf47Q6ZP98 133 aaPredicted RBP1.66□□□□□ -2.14
PSPC1-205ENST00000497722 OTUD6AQ7L8S5 288 aa1.66□□□□□ -2.14
PSPC1-205ENST00000497722 BBS7Q8IWZ6 715 aa1.66□□□□□ -2.14
PSPC1-205ENST00000497722 KIF2BQ8N4N8 673 aa1.66□□□□□ -2.14
PSPC1-205ENST00000497722 LINC00469Q8N7U9 141 aa1.66□□□□□ -2.14
PSPC1-205ENST00000497722 SLC25A29Q8N8R3 303 aa1.66□□□□□ -2.14
PSPC1-205ENST00000497722 C8orf31Q8N9H6 132 aa1.66□□□□□ -2.14
PSPC1-205ENST00000497722 TVP23CQ96ET8 276 aa1.66□□□□□ -2.14
PSPC1-205ENST00000497722 MRPL48Q96GC5 212 aaKnown RBP1.66□□□□□ -2.14
PSPC1-205ENST00000497722 CSPG4P5Q96PW8 444 aa1.66□□□□□ -2.14
PSPC1-205ENST00000497722 TMEM175Q9BSA9 504 aa1.66□□□□□ -2.14
PSPC1-205ENST00000497722 ANGPTL4Q9BY76 406 aa1.66□□□□□ -2.14
PSPC1-205ENST00000497722 API5Q9BZZ5 524 aaKnown RBP1.66□□□□□ -2.14
PSPC1-205ENST00000497722 DEFB129Q9H1M3 183 aa1.66□□□□□ -2.14
PSPC1-205ENST00000497722 FBXO8Q9NRD0 319 aa1.66□□□□□ -2.14
PSPC1-205ENST00000497722 TMEM100Q9NV29 134 aa1.66□□□□□ -2.14
PSPC1-205ENST00000497722 RBFOX1Q9NWB1 397 aaKnown RBP1.66□□□□□ -2.14
PSPC1-205ENST00000497722 HMGXB4Q9UGU5 601 aa1.66□□□□□ -2.14
PSPC1-205ENST00000497722 ZNF391Q9UJN7 358 aa1.66□□□□□ -2.14
PSPC1-205ENST00000497722 CES1P1Q9UKY3 287 aa1.66□□□□□ -2.14
PSPC1-205ENST00000497722 SIGLEC7Q9Y286 467 aa1.66□□□□□ -2.14
PSPC1-205ENST00000497722 SLC22A7Q9Y694 548 aa1.66□□□□□ -2.14
PSPC1-205ENST00000497722 NSD2O96028 1365 aa1.66□□□□□ -2.14
PSPC1-205ENST00000497722 TSPOAP1O95153 1857 aa1.66□□□□□ -2.14
PSPC1-205ENST00000497722 ANKRD12Q6UB98 2062 aa1.66□□□□□ -2.14
PSPC1-205ENST00000497722 BAZ2AQ9UIF9 1905 aaKnown RBP1.66□□□□□ -2.14
PSPC1-205ENST00000497722 LOC102724200A0A096LPH7 203 aaPredicted RBP1.65□□□□□ -2.15
PSPC1-205ENST00000497722 TRAV25A0A0B4J276 109 aa1.65□□□□□ -2.15
PSPC1-205ENST00000497722 CENPXA8MT69 81 aa1.65□□□□□ -2.15
PSPC1-205ENST00000497722 PSPHP1O15172 72 aa1.65□□□□□ -2.15
PSPC1-205ENST00000497722 RGS5O15539 181 aa1.65□□□□□ -2.15
PSPC1-205ENST00000497722 KLHL2O95198 593 aa1.65□□□□□ -2.15
PSPC1-205ENST00000497722 TTC4O95801 387 aa1.65□□□□□ -2.15
PSPC1-205ENST00000497722 FGF4P08620 206 aa1.65□□□□□ -2.15
PSPC1-205ENST00000497722 SLC35G6P0C7Q6 338 aa1.65□□□□□ -2.15
PSPC1-205ENST00000497722 THRAP10827 490 aa1.65□□□□□ -2.15
PSPC1-205ENST00000497722 RALBP11234 206 aa1.65□□□□□ -2.15
PSPC1-205ENST00000497722 BMI1P35226 326 aa1.65□□□□□ -2.15
PSPC1-205ENST00000497722 NUDT2P50583 147 aa1.65□□□□□ -2.15
PSPC1-205ENST00000497722 MTPNP58546 118 aa1.65□□□□□ -2.15
PSPC1-205ENST00000497722 INCA1Q0VD86 236 aa1.65□□□□□ -2.15
PSPC1-205ENST00000497722 TRDNQ13061 729 aa1.65□□□□□ -2.15
PSPC1-205ENST00000497722 TPRG1LQ5T0D9 272 aa1.65□□□□□ -2.15
PSPC1-205ENST00000497722 TMEM236Q5W0B7 351 aa1.65□□□□□ -2.15
PSPC1-205ENST00000497722 CLEC2AQ6UVW9 174 aa1.65□□□□□ -2.15
PSPC1-205ENST00000497722 FAM131AQ6UXB0 335 aa1.65□□□□□ -2.15
PSPC1-205ENST00000497722 TMEM136Q6ZRR5 245 aa1.65□□□□□ -2.15
PSPC1-205ENST00000497722 PAGE2Q7Z2X7 111 aa1.65□□□□□ -2.15
PSPC1-205ENST00000497722 CNPY4Q8N129 248 aa1.65□□□□□ -2.15
PSPC1-205ENST00000497722 LRRC75AQ8NAA5 344 aa1.65□□□□□ -2.15
PSPC1-205ENST00000497722 OR52K2Q8NGK3 314 aa1.65□□□□□ -2.15
PSPC1-205ENST00000497722 RBPMSQ93062 196 aaKnown RBP1.65□□□□□ -2.15
PSPC1-205ENST00000497722 HGDQ93099 445 aa1.65□□□□□ -2.15
PSPC1-205ENST00000497722 NAPGQ99747 312 aaPredicted RBP1.65□□□□□ -2.15
PSPC1-205ENST00000497722 NAA50Q9GZZ1 169 aaKnown RBP1.65□□□□□ -2.15
PSPC1-205ENST00000497722 C6orf50Q9HD87 102 aa1.65□□□□□ -2.15
PSPC1-205ENST00000497722 OR2S2Q9NQN1 319 aa1.65□□□□□ -2.15
PSPC1-205ENST00000497722 HEBP1Q9NRV9 189 aa1.65□□□□□ -2.15
PSPC1-205ENST00000497722 INIPQ9NRY2 104 aa1.65□□□□□ -2.15
PSPC1-205ENST00000497722 IFNKQ9P0W0 207 aa1.65□□□□□ -2.15
PSPC1-205ENST00000497722 COMMD3-BMI1R4GMX3 469 aa1.65□□□□□ -2.15
PSPC1-205ENST00000497722 SCN4AP35499 1836 aa1.64□□□□□ -2.15
PSPC1-205ENST00000497722 TRAV8-4A0A0B4J246 113 aa1.64□□□□□ -2.15
PSPC1-205ENST00000497722 CLDN34H7C241 214 aa1.64□□□□□ -2.15
PSPC1-205ENST00000497722 TRDMT1O14717 391 aaKnown RBP1.64□□□□□ -2.15
PSPC1-205ENST00000497722 SIVA1O15304 175 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms