RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 OR2T29Q8NH02 315 aa18.14■□□□□ 0.49
HDDC3-203ENST00000494993 C8orf46Q8TAG6 207 aa18.14■□□□□ 0.49
HDDC3-203ENST00000494993 PGAM5Q96HS1 289 aa18.14■□□□□ 0.49
HDDC3-203ENST00000494993 REEP1Q9H902 201 aa18.14■□□□□ 0.49
HDDC3-203ENST00000494993 HAO2Q9NYQ3 351 aa18.14■□□□□ 0.49
HDDC3-203ENST00000494993 SAMHD1Q9Y3Z3 626 aaKnown RBP18.14■□□□□ 0.49
HDDC3-203ENST00000494993 TET2Q6N021 2002 aaPredicted RBP18.14■□□□□ 0.49
HDDC3-203ENST00000494993 ANXA2P2A6NMY6 339 aa18.13■□□□□ 0.49
HDDC3-203ENST00000494993 RNASEK-C17orf49H0YIS7 233 aa18.13■□□□□ 0.49
HDDC3-203ENST00000494993 SELLP14151 372 aa18.13■□□□□ 0.49
HDDC3-203ENST00000494993 DHRS7BQ6IAN0 325 aaPredicted RBP18.13■□□□□ 0.49
HDDC3-203ENST00000494993 FTMTQ8N4E7 242 aa18.13■□□□□ 0.49
HDDC3-203ENST00000494993 Q8N7P7 452 aa18.13■□□□□ 0.49
HDDC3-203ENST00000494993 OR5T2Q8NGG2 359 aa18.13■□□□□ 0.49
HDDC3-203ENST00000494993 OR10Z1Q8NGY1 313 aa18.13■□□□□ 0.49
HDDC3-203ENST00000494993 UBE2FQ969M7 185 aa18.13■□□□□ 0.49
HDDC3-203ENST00000494993 RTL8AQ9BWD3 113 aa18.13■□□□□ 0.49
HDDC3-203ENST00000494993 DNTTIP1Q9H147 329 aa18.13■□□□□ 0.49
HDDC3-203ENST00000494993 RGCCQ9H4X1 137 aa18.13■□□□□ 0.49
HDDC3-203ENST00000494993 C16orf95Q9H693 158 aa18.13■□□□□ 0.49
HDDC3-203ENST00000494993 TCF7L1Q9HCS4 588 aa18.13■□□□□ 0.49
HDDC3-203ENST00000494993 DNAJB11Q9UBS4 358 aa18.13■□□□□ 0.49
HDDC3-203ENST00000494993 MPC1Q9Y5U8 109 aa18.13■□□□□ 0.49
HDDC3-203ENST00000494993 BTBD17A6NE02 478 aa18.12■□□□□ 0.49
HDDC3-203ENST00000494993 NPFFO15130 113 aa18.12■□□□□ 0.49
HDDC3-203ENST00000494993 GLCEO94923 617 aa18.12■□□□□ 0.49
HDDC3-203ENST00000494993 H2BFMP0C1H6 154 aa18.12■□□□□ 0.49
HDDC3-203ENST00000494993 EEF1B2P24534 225 aaKnown RBP18.12■□□□□ 0.49
HDDC3-203ENST00000494993 DLX1P56177 255 aa18.12■□□□□ 0.49
HDDC3-203ENST00000494993 GMFBP60983 142 aa18.12■□□□□ 0.49
HDDC3-203ENST00000494993 PRB3Q04118 309 aaPredicted RBP18.12■□□□□ 0.49
HDDC3-203ENST00000494993 PRDX4Q13162 271 aa18.12■□□□□ 0.49
HDDC3-203ENST00000494993 TIGD4Q8IY51 512 aa18.12■□□□□ 0.49
HDDC3-203ENST00000494993 TEX47Q8TBZ9 253 aa18.12■□□□□ 0.49
HDDC3-203ENST00000494993 H1FXQ92522 213 aaKnown RBP18.12■□□□□ 0.49
HDDC3-203ENST00000494993 OTULINQ96BN8 352 aa18.12■□□□□ 0.49
HDDC3-203ENST00000494993 RAB3IPQ96QF0 476 aaPredicted RBP18.12■□□□□ 0.49
HDDC3-203ENST00000494993 NIPSNAP1Q9BPW8 284 aa18.12■□□□□ 0.49
HDDC3-203ENST00000494993 WDR13Q9H1Z4 485 aa18.12■□□□□ 0.49
HDDC3-203ENST00000494993 VPREB3Q9UKI3 123 aa18.12■□□□□ 0.49
HDDC3-203ENST00000494993 ARL2BPQ9Y2Y0 163 aa18.12■□□□□ 0.49
HDDC3-203ENST00000494993 NKX6-3A6NJ46 265 aa18.11■□□□□ 0.49
HDDC3-203ENST00000494993 SLC22A31A6NKX4 558 aa18.11■□□□□ 0.49
HDDC3-203ENST00000494993 TMEM210A6NLX4 147 aa18.11■□□□□ 0.49
HDDC3-203ENST00000494993 DCTN3O75935 186 aa18.11■□□□□ 0.49
HDDC3-203ENST00000494993 ACKR3P25106 362 aa18.11■□□□□ 0.49
HDDC3-203ENST00000494993 KLRD1Q13241 179 aa18.11■□□□□ 0.49
HDDC3-203ENST00000494993 LCN8Q6JVE9 175 aa18.11■□□□□ 0.49
HDDC3-203ENST00000494993 CD300LDQ6UXZ3 194 aa18.11■□□□□ 0.49
HDDC3-203ENST00000494993 IQCF1Q8N6M8 205 aa18.11■□□□□ 0.49
HDDC3-203ENST00000494993 OR10G2Q8NGC3 310 aa18.11■□□□□ 0.49
HDDC3-203ENST00000494993 RPL3LQ92901 407 aaKnown RBP18.11■□□□□ 0.49
HDDC3-203ENST00000494993 MUC13Q9H3R2 512 aa18.11■□□□□ 0.49
HDDC3-203ENST00000494993 ABCB9Q9NP78 766 aa18.11■□□□□ 0.49
HDDC3-203ENST00000494993 SNTG1Q9NSN8 517 aa18.11■□□□□ 0.49
HDDC3-203ENST00000494993 A0A1W2PRD5 423 aa18.1■□□□□ 0.49
HDDC3-203ENST00000494993 A0A1W2PRF3 423 aa18.1■□□□□ 0.49
HDDC3-203ENST00000494993 A0A1W2PRM7 423 aa18.1■□□□□ 0.49
HDDC3-203ENST00000494993 ZNF850A8MQ14 1090 aa18.1■□□□□ 0.49
HDDC3-203ENST00000494993 ZNF788Q6ZQV5 615 aa18.1■□□□□ 0.49
HDDC3-203ENST00000494993 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.1■□□□□ 0.49
HDDC3-203ENST00000494993 OR5P3Q8WZ94 311 aa18.1■□□□□ 0.49
HDDC3-203ENST00000494993 TNFRSF14Q92956 283 aa18.1■□□□□ 0.49
HDDC3-203ENST00000494993 GAFA1Q96PS6 74 aa18.1■□□□□ 0.49
HDDC3-203ENST00000494993 PKP2Q99959 881 aa18.1■□□□□ 0.49
HDDC3-203ENST00000494993 ZNF391Q9UJN7 358 aa18.1■□□□□ 0.49
HDDC3-203ENST00000494993 H3BN98 237 aa18.09■□□□□ 0.49
HDDC3-203ENST00000494993 AKR7A2O43488 359 aa18.09■□□□□ 0.49
HDDC3-203ENST00000494993 TSPAN9O75954 239 aa18.09■□□□□ 0.49
HDDC3-203ENST00000494993 TSPAN15O95858 294 aa18.09■□□□□ 0.49
HDDC3-203ENST00000494993 CST4P01036 141 aa18.09■□□□□ 0.49
HDDC3-203ENST00000494993 LYNP07948 512 aa18.09■□□□□ 0.49
HDDC3-203ENST00000494993 MNAT1P51948 309 aa18.09■□□□□ 0.49
HDDC3-203ENST00000494993 FAM98BQ52LJ0 330 aaKnown RBP18.09■□□□□ 0.49
HDDC3-203ENST00000494993 FAM76BQ5HYJ3 339 aa18.09■□□□□ 0.49
HDDC3-203ENST00000494993 C1orf122Q6ZSJ8 110 aa18.09■□□□□ 0.49
HDDC3-203ENST00000494993 DHFR2Q86XF0 187 aa18.09■□□□□ 0.49
HDDC3-203ENST00000494993 OTOSQ8NHW6 89 aa18.09■□□□□ 0.49
HDDC3-203ENST00000494993 ANGPTL6Q8NI99 470 aa18.09■□□□□ 0.49
HDDC3-203ENST00000494993 HPSE2Q8WWQ2 592 aa18.09■□□□□ 0.49
HDDC3-203ENST00000494993 MED30Q96HR3 178 aa18.09■□□□□ 0.49
HDDC3-203ENST00000494993 FGF23Q9GZV9 251 aaPredicted RBP18.09■□□□□ 0.49
HDDC3-203ENST00000494993 OR51V1Q9H2C8 321 aa18.09■□□□□ 0.49
HDDC3-203ENST00000494993 SLC25A10Q9UBX3 287 aaPredicted RBP18.09■□□□□ 0.49
HDDC3-203ENST00000494993 A0A0G2JK05 382 aa18.08■□□□□ 0.48
HDDC3-203ENST00000494993 PAHP00439 452 aa18.08■□□□□ 0.48
HDDC3-203ENST00000494993 TFF1P04155 84 aa18.08■□□□□ 0.48
HDDC3-203ENST00000494993 PAICSP22234 425 aaKnown RBP18.08■□□□□ 0.48
HDDC3-203ENST00000494993 SAA4P35542 130 aa18.08■□□□□ 0.48
HDDC3-203ENST00000494993 TGFBR2P37173 567 aa18.08■□□□□ 0.48
HDDC3-203ENST00000494993 DGUOKQ16854 277 aa18.08■□□□□ 0.48
HDDC3-203ENST00000494993 KCTD8Q6ZWB6 473 aa18.08■□□□□ 0.48
HDDC3-203ENST00000494993 PIGWQ7Z7B1 504 aa18.08■□□□□ 0.48
HDDC3-203ENST00000494993 ARHGAP24Q8N264 748 aa18.08■□□□□ 0.48
HDDC3-203ENST00000494993 PNKDQ8N490 385 aa18.08■□□□□ 0.48
HDDC3-203ENST00000494993 OR5R1Q8NH85 324 aa18.08■□□□□ 0.48
HDDC3-203ENST00000494993 THEM6Q8WUY1 208 aa18.08■□□□□ 0.48
HDDC3-203ENST00000494993 PIGCQ92535 297 aa18.08■□□□□ 0.48
HDDC3-203ENST00000494993 RNF170Q96K19 258 aa18.08■□□□□ 0.48
HDDC3-203ENST00000494993 LYZL4Q96KX0 146 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms