RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 PFN4Q8NHR9 129 aa11.34□□□□□ -0.59
CHMP2B-205ENST00000494980 NFKBIDQ8NI38 313 aa11.34□□□□□ -0.59
CHMP2B-205ENST00000494980 RBM14Q96PK6 669 aaKnown RBP11.34□□□□□ -0.59
CHMP2B-205ENST00000494980 HDHD2Q9H0R4 259 aa11.34□□□□□ -0.59
CHMP2B-205ENST00000494980 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.34□□□□□ -0.59
CHMP2B-205ENST00000494980 LINC00527Q9UJ94 153 aa11.34□□□□□ -0.59
CHMP2B-205ENST00000494980 V9GYY5 206 aaPredicted RBP11.34□□□□□ -0.59
CHMP2B-205ENST00000494980 DSCAML1Q8TD84 2053 aa11.33□□□□□ -0.6
CHMP2B-205ENST00000494980 EVPLLA8MZ36 301 aa11.33□□□□□ -0.6
CHMP2B-205ENST00000494980 TSPAN19P0C672 248 aa11.33□□□□□ -0.6
CHMP2B-205ENST00000494980 ACSM4P0C7M7 580 aa11.33□□□□□ -0.6
CHMP2B-205ENST00000494980 GABRA2P47869 451 aa11.33□□□□□ -0.6
CHMP2B-205ENST00000494980 SLC35B1P78383 322 aa11.33□□□□□ -0.6
CHMP2B-205ENST00000494980 MXRA7P84157 204 aa11.33□□□□□ -0.6
CHMP2B-205ENST00000494980 SCARB2Q14108 478 aa11.33□□□□□ -0.6
CHMP2B-205ENST00000494980 ALG10Q5BKT4 473 aa11.33□□□□□ -0.6
CHMP2B-205ENST00000494980 TMEM200BQ69YZ2 307 aa11.33□□□□□ -0.6
CHMP2B-205ENST00000494980 EPGNQ6UW88 154 aa11.33□□□□□ -0.6
CHMP2B-205ENST00000494980 CFAP77Q6ZQR2 320 aa11.33□□□□□ -0.6
CHMP2B-205ENST00000494980 MAVSQ7Z434 540 aa11.33□□□□□ -0.6
CHMP2B-205ENST00000494980 TSPYL5Q86VY4 417 aaPredicted RBP11.33□□□□□ -0.6
CHMP2B-205ENST00000494980 SGPP2Q8IWX5 399 aa11.33□□□□□ -0.6
CHMP2B-205ENST00000494980 COMMD1Q8N668 190 aa11.33□□□□□ -0.6
CHMP2B-205ENST00000494980 OR1M1Q8NGA1 313 aa11.33□□□□□ -0.6
CHMP2B-205ENST00000494980 OR13D1Q8NGV5 346 aa11.33□□□□□ -0.6
CHMP2B-205ENST00000494980 SLC25A37Q9NYZ2 338 aa11.33□□□□□ -0.6
CHMP2B-205ENST00000494980 POLR1DQ9Y2S0 133 aa11.33□□□□□ -0.6
CHMP2B-205ENST00000494980 A0A1B0GVY2 172 aa11.32□□□□□ -0.6
CHMP2B-205ENST00000494980 F5H5K5 113 aa11.32□□□□□ -0.6
CHMP2B-205ENST00000494980 CDIPTO14735 213 aa11.32□□□□□ -0.6
CHMP2B-205ENST00000494980 SAP30O75446 220 aa11.32□□□□□ -0.6
CHMP2B-205ENST00000494980 IGHV1-8P0DP01 117 aa11.32□□□□□ -0.6
CHMP2B-205ENST00000494980 GPX2P18283 190 aa11.32□□□□□ -0.6
CHMP2B-205ENST00000494980 CAPZA1P52907 286 aa11.32□□□□□ -0.6
CHMP2B-205ENST00000494980 RPL31P62899 125 aaKnown RBP11.32□□□□□ -0.6
CHMP2B-205ENST00000494980 ZNF92Q03936 586 aa11.32□□□□□ -0.6
CHMP2B-205ENST00000494980 PMS2P11Q13670 270 aa11.32□□□□□ -0.6
CHMP2B-205ENST00000494980 BLOC1S3Q6QNY0 202 aa11.32□□□□□ -0.6
CHMP2B-205ENST00000494980 NAA40Q86UY6 237 aa11.32□□□□□ -0.6
CHMP2B-205ENST00000494980 LYPD6Q86Y78 171 aa11.32□□□□□ -0.6
CHMP2B-205ENST00000494980 Q8N1Y9 231 aa11.32□□□□□ -0.6
CHMP2B-205ENST00000494980 OR11H6Q8NGC7 330 aa11.32□□□□□ -0.6
CHMP2B-205ENST00000494980 OR2AE1Q8NHA4 323 aa11.32□□□□□ -0.6
CHMP2B-205ENST00000494980 NDNFQ8TB73 568 aa11.32□□□□□ -0.6
CHMP2B-205ENST00000494980 SPDL1Q96EA4 605 aa11.32□□□□□ -0.6
CHMP2B-205ENST00000494980 MPP4Q96JB8 637 aa11.32□□□□□ -0.6
CHMP2B-205ENST00000494980 NABP2Q9BQ15 211 aa11.32□□□□□ -0.6
CHMP2B-205ENST00000494980 RPS6KA6Q9UK32 745 aa11.32□□□□□ -0.6
CHMP2B-205ENST00000494980 CXorf65A6NEN9 183 aa11.31□□□□□ -0.6
CHMP2B-205ENST00000494980 A6NIZ1 184 aa11.31□□□□□ -0.6
CHMP2B-205ENST00000494980 SERPINE3A8MV23 424 aa11.31□□□□□ -0.6
CHMP2B-205ENST00000494980 MT-ND1P03886 318 aa11.31□□□□□ -0.6
CHMP2B-205ENST00000494980 SDHAP31040 664 aa11.31□□□□□ -0.6
CHMP2B-205ENST00000494980 RAP1BP61224 184 aa11.31□□□□□ -0.6
CHMP2B-205ENST00000494980 MAGOHP61326 146 aaKnown RBP11.31□□□□□ -0.6
CHMP2B-205ENST00000494980 LSM6P62312 80 aaKnown RBP11.31□□□□□ -0.6
CHMP2B-205ENST00000494980 RAP1AP62834 184 aa11.31□□□□□ -0.6
CHMP2B-205ENST00000494980 ZNF273Q14593 569 aa11.31□□□□□ -0.6
CHMP2B-205ENST00000494980 KRTAP27-1Q3LI81 207 aa11.31□□□□□ -0.6
CHMP2B-205ENST00000494980 ACP7Q6ZNF0 438 aa11.31□□□□□ -0.6
CHMP2B-205ENST00000494980 DPP10Q8N608 796 aa11.31□□□□□ -0.6
CHMP2B-205ENST00000494980 OR56B2PQ8NGI1 322 aa11.31□□□□□ -0.6
CHMP2B-205ENST00000494980 OR6T1Q8NGN1 323 aa11.31□□□□□ -0.6
CHMP2B-205ENST00000494980 SGTBQ96EQ0 304 aa11.31□□□□□ -0.6
CHMP2B-205ENST00000494980 C7orf26Q96N11 449 aa11.31□□□□□ -0.6
CHMP2B-205ENST00000494980 TEX13CA0A0J9YWL9 993 aa11.3□□□□□ -0.6
CHMP2B-205ENST00000494980 TRAPPC13A5PLN9 417 aa11.3□□□□□ -0.6
CHMP2B-205ENST00000494980 OR2AT4A6NND4 320 aa11.3□□□□□ -0.6
CHMP2B-205ENST00000494980 CCRL2O00421 344 aa11.3□□□□□ -0.6
CHMP2B-205ENST00000494980 AQP1P29972 269 aa11.3□□□□□ -0.6
CHMP2B-205ENST00000494980 SNAPC1Q16533 368 aa11.3□□□□□ -0.6
CHMP2B-205ENST00000494980 MINOS1Q5TGZ0 78 aa11.3□□□□□ -0.6
CHMP2B-205ENST00000494980 CORO6Q6QEF8 472 aa11.3□□□□□ -0.6
CHMP2B-205ENST00000494980 CPLX4Q7Z7G2 160 aa11.3□□□□□ -0.6
CHMP2B-205ENST00000494980 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.3□□□□□ -0.6
CHMP2B-205ENST00000494980 MSRB3Q8IXL7 192 aa11.3□□□□□ -0.6
CHMP2B-205ENST00000494980 C11orf65Q8NCR3 313 aa11.3□□□□□ -0.6
CHMP2B-205ENST00000494980 OR4M1Q8NGD0 313 aa11.3□□□□□ -0.6
CHMP2B-205ENST00000494980 PRSS27Q9BQR3 290 aa11.3□□□□□ -0.6
CHMP2B-205ENST00000494980 CCDC28BQ9BUN5 200 aa11.3□□□□□ -0.6
CHMP2B-205ENST00000494980 RABEP2Q9H5N1 569 aa11.3□□□□□ -0.6
CHMP2B-205ENST00000494980 TBC1D23Q9NUY8 699 aa11.3□□□□□ -0.6
CHMP2B-205ENST00000494980 CCDC167Q9P0B6 97 aa11.3□□□□□ -0.6
CHMP2B-205ENST00000494980 VAPAQ9P0L0 249 aa11.3□□□□□ -0.6
CHMP2B-205ENST00000494980 LHFPL6Q9Y693 200 aa11.3□□□□□ -0.6
CHMP2B-205ENST00000494980 MINOS1-NBL1R4GNA1 71 aa11.3□□□□□ -0.6
CHMP2B-205ENST00000494980 SRRM2Q9UQ35 2752 aaKnown RBP11.3□□□□□ -0.6
CHMP2B-205ENST00000494980 IGKV1D-17A0A075B6S4 117 aa11.29□□□□□ -0.6
CHMP2B-205ENST00000494980 TRBV5-3A0A0A0MS03 114 aa11.29□□□□□ -0.6
CHMP2B-205ENST00000494980 M0QZK8 103 aa11.29□□□□□ -0.6
CHMP2B-205ENST00000494980 ANOS1P23352 680 aa11.29□□□□□ -0.6
CHMP2B-205ENST00000494980 CDX1P47902 265 aaPredicted RBP11.29□□□□□ -0.6
CHMP2B-205ENST00000494980 CTXN1P60606 82 aa11.29□□□□□ -0.6
CHMP2B-205ENST00000494980 HIST1H3AP68431 136 aa11.29□□□□□ -0.6
CHMP2B-205ENST00000494980 HIST2H3PS2Q5TEC6 136 aa11.29□□□□□ -0.6
CHMP2B-205ENST00000494980 TMPRSS11FQ6ZWK6 438 aa11.29□□□□□ -0.6
CHMP2B-205ENST00000494980 HIST2H3AQ71DI3 136 aa11.29□□□□□ -0.6
CHMP2B-205ENST00000494980 RBM45Q8IUH3 476 aaKnown RBP11.29□□□□□ -0.6
CHMP2B-205ENST00000494980 FUNDC1Q8IVP5 155 aa11.29□□□□□ -0.6
CHMP2B-205ENST00000494980 FAM71E2Q8N5Q1 922 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms