RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 ZNF770Q6IQ21 691 aaPredicted RBP10.36□□□□□ -0.75
SKA1-205ENST00000494518 KCTD8Q6ZWB6 473 aa10.36□□□□□ -0.75
SKA1-205ENST00000494518 PGAM4Q8N0Y7 254 aa10.36□□□□□ -0.75
SKA1-205ENST00000494518 LINC00471Q8N535 108 aa10.36□□□□□ -0.75
SKA1-205ENST00000494518 C11orf44Q8N8P7 122 aa10.36□□□□□ -0.75
SKA1-205ENST00000494518 MICU1Q9BPX6 476 aa10.36□□□□□ -0.75
SKA1-205ENST00000494518 DCTN5Q9BTE1 182 aa10.36□□□□□ -0.75
SKA1-205ENST00000494518 ABHD6Q9BV23 337 aa10.36□□□□□ -0.75
SKA1-205ENST00000494518 FGF23Q9GZV9 251 aaPredicted RBP10.36□□□□□ -0.75
SKA1-205ENST00000494518 PPA2Q9H2U2 334 aa10.36□□□□□ -0.75
SKA1-205ENST00000494518 ARL8BQ9NVJ2 186 aa10.36□□□□□ -0.75
SKA1-205ENST00000494518 A0A1W2PQ09 198 aa10.35□□□□□ -0.75
SKA1-205ENST00000494518 NKX6-3A6NJ46 265 aa10.35□□□□□ -0.75
SKA1-205ENST00000494518 RIIAD1A6NNX1 92 aa10.35□□□□□ -0.75
SKA1-205ENST00000494518 ZNF850A8MQ14 1090 aa10.35□□□□□ -0.75
SKA1-205ENST00000494518 KRT36O76013 467 aa10.35□□□□□ -0.75
SKA1-205ENST00000494518 NDUFB7P17568 137 aa10.35□□□□□ -0.75
SKA1-205ENST00000494518 POU1F1P28069 291 aa10.35□□□□□ -0.75
SKA1-205ENST00000494518 NAA10P41227 235 aaPredicted RBP10.35□□□□□ -0.75
SKA1-205ENST00000494518 MXRA7P84157 204 aa10.35□□□□□ -0.75
SKA1-205ENST00000494518 PRDX4Q13162 271 aa10.35□□□□□ -0.75
SKA1-205ENST00000494518 LY6EQ16553 131 aa10.35□□□□□ -0.75
SKA1-205ENST00000494518 DGUOKQ16854 277 aa10.35□□□□□ -0.75
SKA1-205ENST00000494518 C2orf68Q2NKX9 166 aa10.35□□□□□ -0.75
SKA1-205ENST00000494518 TEX30Q5JUR7 227 aa10.35□□□□□ -0.75
SKA1-205ENST00000494518 PRSS45Q7RTY3 260 aa10.35□□□□□ -0.75
SKA1-205ENST00000494518 DEFB107AQ8IZN7 70 aa10.35□□□□□ -0.75
SKA1-205ENST00000494518 OR2T33Q8NG76 320 aa10.35□□□□□ -0.75
SKA1-205ENST00000494518 C17orf50Q8WW18 174 aa10.35□□□□□ -0.75
SKA1-205ENST00000494518 ITPKCQ96DU7 683 aa10.35□□□□□ -0.75
SKA1-205ENST00000494518 GAFA1Q96PS6 74 aa10.35□□□□□ -0.75
SKA1-205ENST00000494518 INTS14Q96SY0 518 aa10.35□□□□□ -0.75
SKA1-205ENST00000494518 OR10A2Q9H208 303 aa10.35□□□□□ -0.75
SKA1-205ENST00000494518 C16orf95Q9H693 158 aa10.35□□□□□ -0.75
SKA1-205ENST00000494518 HAO2Q9NYQ3 351 aa10.35□□□□□ -0.75
SKA1-205ENST00000494518 CAB39Q9Y376 341 aaPredicted RBP10.35□□□□□ -0.75
SKA1-205ENST00000494518 ANXA2P2A6NMY6 339 aa10.34□□□□□ -0.75
SKA1-205ENST00000494518 TIPRLO75663 272 aa10.34□□□□□ -0.75
SKA1-205ENST00000494518 IFNGP01579 166 aa10.34□□□□□ -0.75
SKA1-205ENST00000494518 PRB2P02812 416 aaPredicted RBP10.34□□□□□ -0.75
SKA1-205ENST00000494518 CSF1P09603 554 aa10.34□□□□□ -0.75
SKA1-205ENST00000494518 H2BFMP0C1H6 154 aa10.34□□□□□ -0.75
SKA1-205ENST00000494518 ZNF3P17036 446 aa10.34□□□□□ -0.75
SKA1-205ENST00000494518 ACKR3P25106 362 aa10.34□□□□□ -0.75
SKA1-205ENST00000494518 GSTT1P30711 240 aa10.34□□□□□ -0.75
SKA1-205ENST00000494518 TGM4P49221 684 aa10.34□□□□□ -0.75
SKA1-205ENST00000494518 HMGA2P52926 109 aa10.34□□□□□ -0.75
SKA1-205ENST00000494518 DMRTC1Q5HYR2 192 aa10.34□□□□□ -0.75
SKA1-205ENST00000494518 SLC35E4Q6ICL7 350 aa10.34□□□□□ -0.75
SKA1-205ENST00000494518 C1orf122Q6ZSJ8 110 aa10.34□□□□□ -0.75
SKA1-205ENST00000494518 RNF133Q8WVZ7 376 aa10.34□□□□□ -0.75
SKA1-205ENST00000494518 PIGCQ92535 297 aa10.34□□□□□ -0.75
SKA1-205ENST00000494518 RORBQ92753 470 aa10.34□□□□□ -0.75
SKA1-205ENST00000494518 TNFRSF14Q92956 283 aa10.34□□□□□ -0.75
SKA1-205ENST00000494518 RAB3IPQ96QF0 476 aaPredicted RBP10.34□□□□□ -0.75
SKA1-205ENST00000494518 RTL8AQ9BWD3 113 aa10.34□□□□□ -0.75
SKA1-205ENST00000494518 TLNRD1Q9H1K6 362 aa10.34□□□□□ -0.75
SKA1-205ENST00000494518 OR51V1Q9H2C8 321 aa10.34□□□□□ -0.75
SKA1-205ENST00000494518 TOR3AQ9H497 397 aa10.34□□□□□ -0.75
SKA1-205ENST00000494518 SLC25A10Q9UBX3 287 aaPredicted RBP10.34□□□□□ -0.75
SKA1-205ENST00000494518 DNAH3Q8TD57 4116 aa10.34□□□□□ -0.75
SKA1-205ENST00000494518 G3V4G9 280 aa10.33□□□□□ -0.76
SKA1-205ENST00000494518 H3BUX3 64 aa10.33□□□□□ -0.76
SKA1-205ENST00000494518 SNX3O60493 162 aa10.33□□□□□ -0.76
SKA1-205ENST00000494518 SELENOFO60613 162 aa10.33□□□□□ -0.76
SKA1-205ENST00000494518 TSPAN9O75954 239 aa10.33□□□□□ -0.76
SKA1-205ENST00000494518 TGFBR2P37173 567 aa10.33□□□□□ -0.76
SKA1-205ENST00000494518 OPRL1P41146 370 aa10.33□□□□□ -0.76
SKA1-205ENST00000494518 GABRA2P47869 451 aa10.33□□□□□ -0.76
SKA1-205ENST00000494518 IL5RAQ01344 420 aa10.33□□□□□ -0.76
SKA1-205ENST00000494518 C11orf91Q3C1V1 193 aa10.33□□□□□ -0.76
SKA1-205ENST00000494518 METAP1DQ6UB28 335 aaPredicted RBP10.33□□□□□ -0.76
SKA1-205ENST00000494518 ZNF788Q6ZQV5 615 aa10.33□□□□□ -0.76
SKA1-205ENST00000494518 GALNT4Q8N4A0 578 aa10.33□□□□□ -0.76
SKA1-205ENST00000494518 CSNK2A3Q8NEV1 391 aa10.33□□□□□ -0.76
SKA1-205ENST00000494518 OR52H1Q8NGJ2 320 aa10.33□□□□□ -0.76
SKA1-205ENST00000494518 PPP1R35Q8TAP8 253 aa10.33□□□□□ -0.76
SKA1-205ENST00000494518 HPSE2Q8WWQ2 592 aa10.33□□□□□ -0.76
SKA1-205ENST00000494518 OR5P3Q8WZ94 311 aa10.33□□□□□ -0.76
SKA1-205ENST00000494518 C12orf43Q96C57 262 aaKnown RBP10.33□□□□□ -0.76
SKA1-205ENST00000494518 DUS3LQ96G46 650 aaKnown RBP10.33□□□□□ -0.76
SKA1-205ENST00000494518 RNF170Q96K19 258 aa10.33□□□□□ -0.76
SKA1-205ENST00000494518 LYZL4Q96KX0 146 aa10.33□□□□□ -0.76
SKA1-205ENST00000494518 NIPSNAP1Q9BPW8 284 aa10.33□□□□□ -0.76
SKA1-205ENST00000494518 SP140LQ9H930 580 aa10.33□□□□□ -0.76
SKA1-205ENST00000494518 TAGLN3Q9UI15 199 aa10.33□□□□□ -0.76
SKA1-205ENST00000494518 FOXJ3Q9UPW0 622 aa10.33□□□□□ -0.76
SKA1-205ENST00000494518 BAIAP2Q9UQB8 552 aa10.33□□□□□ -0.76
SKA1-205ENST00000494518 KLHDC2Q9Y2U9 406 aa10.33□□□□□ -0.76
SKA1-205ENST00000494518 SAMHD1Q9Y3Z3 626 aaKnown RBP10.33□□□□□ -0.76
SKA1-205ENST00000494518 H3BN98 237 aa10.32□□□□□ -0.76
SKA1-205ENST00000494518 ANGPTL7O43827 346 aa10.32□□□□□ -0.76
SKA1-205ENST00000494518 RHBDL1O75783 438 aa10.32□□□□□ -0.76
SKA1-205ENST00000494518 GLCEO94923 617 aa10.32□□□□□ -0.76
SKA1-205ENST00000494518 APOC1P02654 83 aa10.32□□□□□ -0.76
SKA1-205ENST00000494518 GLRA1P23415 457 aa10.32□□□□□ -0.76
SKA1-205ENST00000494518 CFL1P23528 166 aaKnown RBP10.32□□□□□ -0.76
SKA1-205ENST00000494518 GABRA5P31644 462 aa10.32□□□□□ -0.76
SKA1-205ENST00000494518 MAGEA2P43356 314 aa10.32□□□□□ -0.76
SKA1-205ENST00000494518 GPM6AP51674 278 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms