RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 ZNF879B4DU55 563 aa14.63□□□□□ -0.07
LIME1-208ENST00000493265 MLNRO43193 412 aa14.63□□□□□ -0.07
LIME1-208ENST00000493265 RGS9O75916 674 aaPredicted RBP14.63□□□□□ -0.07
LIME1-208ENST00000493265 NRASP01111 189 aa14.63□□□□□ -0.07
LIME1-208ENST00000493265 IGHV1-46P01743 117 aa14.63□□□□□ -0.07
LIME1-208ENST00000493265 CD2P06729 351 aa14.63□□□□□ -0.07
LIME1-208ENST00000493265 BMP4P12644 408 aa14.63□□□□□ -0.07
LIME1-208ENST00000493265 CD36P16671 472 aa14.63□□□□□ -0.07
LIME1-208ENST00000493265 GABRA5P31644 462 aa14.63□□□□□ -0.07
LIME1-208ENST00000493265 ZMAT1Q5H9K5 638 aa14.63□□□□□ -0.07
LIME1-208ENST00000493265 CLVS2Q5SYC1 327 aa14.63□□□□□ -0.07
LIME1-208ENST00000493265 ZDHHC23Q8IYP9 409 aa14.63□□□□□ -0.07
LIME1-208ENST00000493265 OR8S1Q8NH09 359 aa14.63□□□□□ -0.07
LIME1-208ENST00000493265 TMEM106AQ96A25 262 aa14.63□□□□□ -0.07
LIME1-208ENST00000493265 ELMOD3Q96FG2 381 aa14.63□□□□□ -0.07
LIME1-208ENST00000493265 HIST1H2AAQ96QV6 131 aa14.63□□□□□ -0.07
LIME1-208ENST00000493265 CXXC4Q9H2H0 198 aa14.63□□□□□ -0.07
LIME1-208ENST00000493265 EXOSC4Q9NPD3 245 aaKnown RBP14.63□□□□□ -0.07
LIME1-208ENST00000493265 SF3B6Q9Y3B4 125 aaKnown RBP14.63□□□□□ -0.07
LIME1-208ENST00000493265 DHRS7CA6NNS2 312 aa14.62□□□□□ -0.07
LIME1-208ENST00000493265 C17orf100A8MU93 164 aa14.62□□□□□ -0.07
LIME1-208ENST00000493265 F5H5P2 479 aa14.62□□□□□ -0.07
LIME1-208ENST00000493265 GMDSO60547 372 aa14.62□□□□□ -0.07
LIME1-208ENST00000493265 SERPINA3P01011 423 aa14.62□□□□□ -0.07
LIME1-208ENST00000493265 CST4P01036 141 aa14.62□□□□□ -0.07
LIME1-208ENST00000493265 OCMP0CE72 109 aaPredicted RBP14.62□□□□□ -0.07
LIME1-208ENST00000493265 CD53P19397 219 aa14.62□□□□□ -0.07
LIME1-208ENST00000493265 CCL8P80075 99 aa14.62□□□□□ -0.07
LIME1-208ENST00000493265 FABP5Q01469 135 aa14.62□□□□□ -0.07
LIME1-208ENST00000493265 TRAM1Q15629 374 aa14.62□□□□□ -0.07
LIME1-208ENST00000493265 FAM27D1Q5T7N8 215 aa14.62□□□□□ -0.07
LIME1-208ENST00000493265 Q6ZSR3 168 aa14.62□□□□□ -0.07
LIME1-208ENST00000493265 OR13C9Q8NGT0 318 aa14.62□□□□□ -0.07
LIME1-208ENST00000493265 TRMT10AQ8TBZ6 339 aaKnown RBP14.62□□□□□ -0.07
LIME1-208ENST00000493265 NINJ1Q92982 152 aa14.62□□□□□ -0.07
LIME1-208ENST00000493265 MS4A5Q9H3V2 200 aa14.62□□□□□ -0.07
LIME1-208ENST00000493265 NOX4Q9NPH5 578 aa14.62□□□□□ -0.07
LIME1-208ENST00000493265 TAS2R4Q9NYW5 299 aa14.62□□□□□ -0.07
LIME1-208ENST00000493265 CGGBP1Q9UFW8 167 aaPredicted RBP14.62□□□□□ -0.07
LIME1-208ENST00000493265 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.61□□□□□ -0.07
LIME1-208ENST00000493265 ANXA2P2A6NMY6 339 aa14.61□□□□□ -0.07
LIME1-208ENST00000493265 GABRPO00591 440 aa14.61□□□□□ -0.07
LIME1-208ENST00000493265 TFAP2AP05549 437 aa14.61□□□□□ -0.07
LIME1-208ENST00000493265 TNFSF4P23510 183 aa14.61□□□□□ -0.07
LIME1-208ENST00000493265 GADD45AP24522 165 aa14.61□□□□□ -0.07
LIME1-208ENST00000493265 PSMA1P25786 263 aaKnown RBP14.61□□□□□ -0.07
LIME1-208ENST00000493265 TGFBR2P37173 567 aa14.61□□□□□ -0.07
LIME1-208ENST00000493265 PPOXP50336 477 aa14.61□□□□□ -0.07
LIME1-208ENST00000493265 TNFAIP6P98066 277 aaPredicted RBP14.61□□□□□ -0.07
LIME1-208ENST00000493265 ZBTB37Q5TC79 503 aa14.61□□□□□ -0.07
LIME1-208ENST00000493265 PAMR1Q6UXH9 720 aa14.61□□□□□ -0.07
LIME1-208ENST00000493265 TMEM91Q6ZNR0 172 aa14.61□□□□□ -0.07
LIME1-208ENST00000493265 SERPINA12Q8IW75 414 aa14.61□□□□□ -0.07
LIME1-208ENST00000493265 PIGTQ969N2 578 aa14.61□□□□□ -0.07
LIME1-208ENST00000493265 DERL3Q96Q80 235 aa14.61□□□□□ -0.07
LIME1-208ENST00000493265 SLC22A4Q9H015 551 aa14.61□□□□□ -0.07
LIME1-208ENST00000493265 OR51E2Q9H255 320 aa14.61□□□□□ -0.07
LIME1-208ENST00000493265 ZDHHC8Q9ULC8 765 aa14.61□□□□□ -0.07
LIME1-208ENST00000493265 MPC1Q9Y5U8 109 aa14.61□□□□□ -0.07
LIME1-208ENST00000493265 FLNAP21333 2647 aaKnown RBP14.61□□□□□ -0.07
LIME1-208ENST00000493265 LOC100506127A0A0U1RQW1 187 aa14.6□□□□□ -0.07
LIME1-208ENST00000493265 FAM230AA0A1W2PPH8 454 aa14.6□□□□□ -0.07
LIME1-208ENST00000493265 RAF1P04049 648 aa14.6□□□□□ -0.07
LIME1-208ENST00000493265 GRPP07492 148 aa14.6□□□□□ -0.07
LIME1-208ENST00000493265 MAPK3P27361 379 aaPredicted RBP14.6□□□□□ -0.07
LIME1-208ENST00000493265 UBE2V2Q15819 145 aa14.6□□□□□ -0.07
LIME1-208ENST00000493265 SPRNQ5BIV9 151 aa14.6□□□□□ -0.07
LIME1-208ENST00000493265 GPR141Q7Z602 305 aa14.6□□□□□ -0.07
LIME1-208ENST00000493265 OR5D14Q8NGL3 314 aa14.6□□□□□ -0.07
LIME1-208ENST00000493265 UBASH3BQ8TF42 649 aa14.6□□□□□ -0.07
LIME1-208ENST00000493265 PP6455Q8WZ26 134 aa14.6□□□□□ -0.07
LIME1-208ENST00000493265 RNF170Q96K19 258 aa14.6□□□□□ -0.07
LIME1-208ENST00000493265 SORCS2Q96PQ0 1159 aa14.6□□□□□ -0.07
LIME1-208ENST00000493265 OR2V2Q96R30 315 aa14.6□□□□□ -0.07
LIME1-208ENST00000493265 MICU1Q9BPX6 476 aa14.6□□□□□ -0.07
LIME1-208ENST00000493265 CHCHD6Q9BRQ6 235 aa14.6□□□□□ -0.07
LIME1-208ENST00000493265 CHST5Q9GZS9 411 aa14.6□□□□□ -0.07
LIME1-208ENST00000493265 RAB1BQ9H0U4 201 aa14.6□□□□□ -0.07
LIME1-208ENST00000493265 GSX1Q9H4S2 264 aaPredicted RBP14.6□□□□□ -0.07
LIME1-208ENST00000493265 ZCCHC4Q9H5U6 513 aa14.6□□□□□ -0.07
LIME1-208ENST00000493265 CXorf56Q9H5V9 222 aa14.6□□□□□ -0.07
LIME1-208ENST00000493265 DECR2Q9NUI1 292 aa14.6□□□□□ -0.07
LIME1-208ENST00000493265 NKIRAS2Q9NYR9 191 aa14.6□□□□□ -0.07
LIME1-208ENST00000493265 NOP16Q9Y3C1 178 aaKnown RBP14.6□□□□□ -0.07
LIME1-208ENST00000493265 DSCAMO60469 2012 aa14.59□□□□□ -0.07
LIME1-208ENST00000493265 TRBV5-7A0A0A0MS05 114 aa14.59□□□□□ -0.07
LIME1-208ENST00000493265 PIN1P1O15428 100 aa14.59□□□□□ -0.07
LIME1-208ENST00000493265 NDUFS7O75251 213 aa14.59□□□□□ -0.07
LIME1-208ENST00000493265 GATBO75879 557 aaKnown RBP14.59□□□□□ -0.07
LIME1-208ENST00000493265 LY6HO94772 140 aa14.59□□□□□ -0.07
LIME1-208ENST00000493265 ERCC1P07992 297 aaPredicted RBP14.59□□□□□ -0.07
LIME1-208ENST00000493265 ATF1P18846 271 aa14.59□□□□□ -0.07
LIME1-208ENST00000493265 DNASE1P24855 282 aa14.59□□□□□ -0.07
LIME1-208ENST00000493265 CRYBB2P43320 205 aa14.59□□□□□ -0.07
LIME1-208ENST00000493265 ALDH3B2P48448 385 aa14.59□□□□□ -0.07
LIME1-208ENST00000493265 GPM6AP51674 278 aa14.59□□□□□ -0.07
LIME1-208ENST00000493265 HNRNPA0Q13151 305 aaKnown RBP14.59□□□□□ -0.07
LIME1-208ENST00000493265 PRAMEF6Q5VXH4 476 aa14.59□□□□□ -0.07
LIME1-208ENST00000493265 TMEM42Q69YG0 159 aa14.59□□□□□ -0.07
LIME1-208ENST00000493265 C22orf42Q6IC83 251 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms