RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 RPL35AP18077 110 aaKnown RBP3.63□□□□□ -1.83
BRCA1-220ENST00000492859 AZU1P20160 251 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 PSMB1P20618 241 aaKnown RBP3.63□□□□□ -1.83
BRCA1-220ENST00000492859 PRKACGP22612 351 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 GATA3P23771 443 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 ZBTB25P24278 435 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 GLRXP35754 106 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 OPRD1P41143 372 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 GZMKP49863 264 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 RAB5CP51148 216 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 HCCSP53701 268 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 PITX1P78337 314 aaPredicted RBP3.63□□□□□ -1.83
BRCA1-220ENST00000492859 CDKL1Q00532 357 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 RUNX1Q01196 453 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 KLF5Q13887 457 aaPredicted RBP3.63□□□□□ -1.83
BRCA1-220ENST00000492859 GGTLC2Q14390 218 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 SLC10A1Q14973 349 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 OR8B8Q15620 311 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 Q5BKY6 102 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 PYY3Q5JQD4 70 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 CLLU1Q5K131 121 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 C1orf195Q5TG92 126 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 HECTD2Q5U5R9 776 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 OTPQ5XKR4 325 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 SFXN4Q6P4A7 337 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 TEPPQ6URK8 271 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 ZNF66Q6ZN08 573 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 C5orf24Q7Z6I8 188 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 CMC1Q7Z7K0 106 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 MRGPRGQ86SM5 289 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 IFNEQ86WN2 208 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 KLHDC8BQ8IXV7 354 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 H1FOOQ8IZA3 346 aaPredicted RBP3.63□□□□□ -1.83
BRCA1-220ENST00000492859 TMEM99Q8N816 258 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 OR4K1Q8NGD4 311 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 OR1L8Q8NGR8 309 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 OR13J1Q8NGT2 312 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 ZNRF2Q8NHG8 242 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 CYGBQ8WWM9 190 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 SARAFQ96BY9 339 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 P2RY11Q96G91 374 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 LOXL4Q96JB6 756 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 SMIM8Q96KF7 97 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 CNBD2Q96M20 576 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 GPR82Q96P67 336 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 OXGR1Q96P68 337 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 GNRHR2Q96P88 292 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 CDX2Q99626 313 aaPredicted RBP3.63□□□□□ -1.83
BRCA1-220ENST00000492859 GABRG3Q99928 467 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 KRTAP4-5Q9BYR2 181 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 CDC42EP4Q9H3Q1 356 aaKnown RBP3.63□□□□□ -1.83
BRCA1-220ENST00000492859 AAMDCQ9H7C9 122 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 GALNT9Q9HCQ5 603 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 GKN1Q9NS71 199 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 TMEM216Q9P0N5 145 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 DOK5Q9P104 306 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 ERG28Q9UKR5 140 aa3.63□□□□□ -1.83
BRCA1-220ENST00000492859 CARHSP1Q9Y2V2 147 aaKnown RBP3.63□□□□□ -1.83
BRCA1-220ENST00000492859 XIRP1Q702N8 1843 aaKnown RBP3.63□□□□□ -1.83
BRCA1-220ENST00000492859 INO80Q9ULG1 1556 aaPredicted RBP3.62□□□□□ -1.83
BRCA1-220ENST00000492859 OTOFQ9HC10 1997 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 FRMPD3Q5JV73 1810 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 TRAV30A0A087WSZ9 112 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 A0A0G2JLL6 359 aaPredicted RBP3.62□□□□□ -1.83
BRCA1-220ENST00000492859 CCDC195A0A1B0GUA6 201 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 CIB4A0PJX0 185 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 MEGF11A6BM72 1044 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 DDTLA6NHG4 134 aaPredicted RBP3.62□□□□□ -1.83
BRCA1-220ENST00000492859 ZNF726A6NNF4 738 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 C1orf196B1AJZ1 125 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 ZNF732B4DXR9 585 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 OVOL3O00110 214 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 OR7C2O60412 319 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 CLDN11O75508 207 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 TIAF1O95411 115 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 TSPAN15O95858 294 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 IGHV2-5P01817 119 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 SEMG1P04279 462 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 TFAP2AP05549 437 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 SULT1A3P0DMM9 295 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 SULT1A4P0DMN0 295 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 GLI4P10075 376 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 TDGF1P13385 188 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 CREB1P16220 341 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 MDH2P40926 338 aaKnown RBP3.62□□□□□ -1.83
BRCA1-220ENST00000492859 REG1BP48304 166 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 OR5I1Q13606 314 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 HTR4Q13639 388 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 QPRTQ15274 297 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 LRRC26Q2I0M4 334 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 CD300EQ496F6 205 aaPredicted RBP3.62□□□□□ -1.83
BRCA1-220ENST00000492859 SYTL3Q4VX76 610 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 AKR1C8PQ5T2L2 129 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 FRRS1Q6ZNA5 592 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 RASSF6Q6ZTQ3 369 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 SHFQ7M4L6 423 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 C16orf82Q7Z2V1 217 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 C6orf120Q7Z4R8 191 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 CALHM3Q86XJ0 350 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 MMD2Q8IY49 270 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms