RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 MYL9P24844 172 aa15.88■□□□□ 0.13
MCF2L-230ENST00000491028 CALRP27797 417 aaKnown RBP15.88■□□□□ 0.13
MCF2L-230ENST00000491028 PPOXP50336 477 aa15.88■□□□□ 0.13
MCF2L-230ENST00000491028 ZNF81P51508 661 aa15.88■□□□□ 0.13
MCF2L-230ENST00000491028 TMBIM6P55061 237 aa15.88■□□□□ 0.13
MCF2L-230ENST00000491028 OR8G1Q15617 311 aa15.88■□□□□ 0.13
MCF2L-230ENST00000491028 FAM27D1Q5T7N8 215 aa15.88■□□□□ 0.13
MCF2L-230ENST00000491028 PLCXD3Q63HM9 321 aa15.88■□□□□ 0.13
MCF2L-230ENST00000491028 ASPHD2Q6ICH7 369 aa15.88■□□□□ 0.13
MCF2L-230ENST00000491028 C11orf71Q6IPW1 123 aa15.88■□□□□ 0.13
MCF2L-230ENST00000491028 Q6ZR03 302 aa15.88■□□□□ 0.13
MCF2L-230ENST00000491028 SPERTQ8NA61 448 aa15.88■□□□□ 0.13
MCF2L-230ENST00000491028 OR1M1Q8NGA1 313 aa15.88■□□□□ 0.13
MCF2L-230ENST00000491028 OR13C9Q8NGT0 318 aa15.88■□□□□ 0.13
MCF2L-230ENST00000491028 RAB2BQ8WUD1 216 aa15.88■□□□□ 0.13
MCF2L-230ENST00000491028 RPL3LQ92901 407 aaKnown RBP15.88■□□□□ 0.13
MCF2L-230ENST00000491028 MARVELD3Q96A59 401 aa15.88■□□□□ 0.13
MCF2L-230ENST00000491028 KCTD7Q96MP8 289 aa15.88■□□□□ 0.13
MCF2L-230ENST00000491028 HIST1H2AAQ96QV6 131 aa15.88■□□□□ 0.13
MCF2L-230ENST00000491028 TRAF4Q9BUZ4 470 aaPredicted RBP15.88■□□□□ 0.13
MCF2L-230ENST00000491028 MS4A5Q9H3V2 200 aa15.88■□□□□ 0.13
MCF2L-230ENST00000491028 MSL2Q9HCI7 577 aa15.88■□□□□ 0.13
MCF2L-230ENST00000491028 TCF7L1Q9HCS4 588 aa15.88■□□□□ 0.13
MCF2L-230ENST00000491028 DYNLRB1Q9NP97 96 aa15.88■□□□□ 0.13
MCF2L-230ENST00000491028 GPR173Q9NS66 373 aa15.88■□□□□ 0.13
MCF2L-230ENST00000491028 UTP20O75691 2785 aaKnown RBP15.88■□□□□ 0.13
MCF2L-230ENST00000491028 HRNRQ86YZ3 2850 aaPredicted RBP15.88■□□□□ 0.13
MCF2L-230ENST00000491028 SMIM31A0A1B0GVY4 71 aa15.87■□□□□ 0.13
MCF2L-230ENST00000491028 A0A1W2PPK0 400 aa15.87■□□□□ 0.13
MCF2L-230ENST00000491028 ZSCAN5BA6NJL1 495 aa15.87■□□□□ 0.13
MCF2L-230ENST00000491028 MLNRO43193 412 aa15.87■□□□□ 0.13
MCF2L-230ENST00000491028 BMP4P12644 408 aa15.87■□□□□ 0.13
MCF2L-230ENST00000491028 ATF1P18846 271 aa15.87■□□□□ 0.13
MCF2L-230ENST00000491028 SRMP19623 302 aa15.87■□□□□ 0.13
MCF2L-230ENST00000491028 PRKACBP22694 351 aa15.87■□□□□ 0.13
MCF2L-230ENST00000491028 ALDH3B1P43353 468 aa15.87■□□□□ 0.13
MCF2L-230ENST00000491028 MZT1Q08AG7 82 aa15.87■□□□□ 0.13
MCF2L-230ENST00000491028 UBE2V2Q15819 145 aa15.87■□□□□ 0.13
MCF2L-230ENST00000491028 MOB3CQ70IA8 216 aa15.87■□□□□ 0.13
MCF2L-230ENST00000491028 ZNF420Q8TAQ5 688 aaPredicted RBP15.87■□□□□ 0.13
MCF2L-230ENST00000491028 SPSB1Q96BD6 273 aa15.87■□□□□ 0.13
MCF2L-230ENST00000491028 ITPKCQ96DU7 683 aa15.87■□□□□ 0.13
MCF2L-230ENST00000491028 CENPOQ9BU64 300 aa15.87■□□□□ 0.13
MCF2L-230ENST00000491028 NAA50Q9GZZ1 169 aaKnown RBP15.87■□□□□ 0.13
MCF2L-230ENST00000491028 PPIL3Q9H2H8 161 aaKnown RBP15.87■□□□□ 0.13
MCF2L-230ENST00000491028 SNTG1Q9NSN8 517 aa15.87■□□□□ 0.13
MCF2L-230ENST00000491028 NDUFA13Q9P0J0 144 aa15.87■□□□□ 0.13
MCF2L-230ENST00000491028 SLC7A11Q9UPY5 501 aa15.87■□□□□ 0.13
MCF2L-230ENST00000491028 ABCA4P78363 2273 aa15.87■□□□□ 0.13
MCF2L-230ENST00000491028 TRAV8-7A0A075B6U6 113 aa15.86■□□□□ 0.13
MCF2L-230ENST00000491028 TRAV1-2A0A0B4J238 106 aa15.86■□□□□ 0.13
MCF2L-230ENST00000491028 OR5B21A6NL26 309 aa15.86■□□□□ 0.13
MCF2L-230ENST00000491028 CYSRT1A8MQ03 144 aa15.86■□□□□ 0.13
MCF2L-230ENST00000491028 C17orf100A8MU93 164 aa15.86■□□□□ 0.13
MCF2L-230ENST00000491028 ERCC1P07992 297 aaPredicted RBP15.86■□□□□ 0.13
MCF2L-230ENST00000491028 SOD3P08294 240 aa15.86■□□□□ 0.13
MCF2L-230ENST00000491028 OCMP0CE72 109 aaPredicted RBP15.86■□□□□ 0.13
MCF2L-230ENST00000491028 AZGP1P25311 298 aaKnown RBP15.86■□□□□ 0.13
MCF2L-230ENST00000491028 CEACAM21Q3KPI0 293 aa15.86■□□□□ 0.13
MCF2L-230ENST00000491028 CEP78Q5JTW2 689 aa15.86■□□□□ 0.13
MCF2L-230ENST00000491028 NKAIN3Q8N8D7 197 aa15.86■□□□□ 0.13
MCF2L-230ENST00000491028 DNAAF1Q8NEP3 725 aa15.86■□□□□ 0.13
MCF2L-230ENST00000491028 OR5A2Q8NGI9 324 aa15.86■□□□□ 0.13
MCF2L-230ENST00000491028 OR8S1Q8NH09 359 aa15.86■□□□□ 0.13
MCF2L-230ENST00000491028 HPSE2Q8WWQ2 592 aa15.86■□□□□ 0.13
MCF2L-230ENST00000491028 OR5P3Q8WZ94 311 aa15.86■□□□□ 0.13
MCF2L-230ENST00000491028 ORAI1Q96D31 301 aa15.86■□□□□ 0.13
MCF2L-230ENST00000491028 ELMOD3Q96FG2 381 aa15.86■□□□□ 0.13
MCF2L-230ENST00000491028 MICU1Q9BPX6 476 aa15.86■□□□□ 0.13
MCF2L-230ENST00000491028 RTL8AQ9BWD3 113 aa15.86■□□□□ 0.13
MCF2L-230ENST00000491028 TMEM138Q9NPI0 162 aa15.86■□□□□ 0.13
MCF2L-230ENST00000491028 CEPT1Q9Y6K0 416 aa15.86■□□□□ 0.13
MCF2L-230ENST00000491028 PMF1-BGLAPU3KQ54 211 aa15.86■□□□□ 0.13
MCF2L-230ENST00000491028 IGKV1-9A0A0C4DH69 117 aa15.85■□□□□ 0.13
MCF2L-230ENST00000491028 MEGF11A6BM72 1044 aa15.85■□□□□ 0.13
MCF2L-230ENST00000491028 CD8AP01732 235 aa15.85■□□□□ 0.13
MCF2L-230ENST00000491028 ALDOBP05062 364 aa15.85■□□□□ 0.13
MCF2L-230ENST00000491028 TNFSF4P23510 183 aa15.85■□□□□ 0.13
MCF2L-230ENST00000491028 BDKRB2P30411 391 aa15.85■□□□□ 0.13
MCF2L-230ENST00000491028 MTNR1BP49286 362 aa15.85■□□□□ 0.13
MCF2L-230ENST00000491028 FUT6P51993 359 aa15.85■□□□□ 0.13
MCF2L-230ENST00000491028 CTF1Q16619 201 aa15.85■□□□□ 0.13
MCF2L-230ENST00000491028 OR2Z1Q8NG97 314 aa15.85■□□□□ 0.13
MCF2L-230ENST00000491028 OR10AD1Q8NGE0 317 aa15.85■□□□□ 0.13
MCF2L-230ENST00000491028 GTF3AQ92664 365 aaKnown RBP15.85■□□□□ 0.13
MCF2L-230ENST00000491028 CPNE2Q96FN4 548 aaPredicted RBP15.85■□□□□ 0.13
MCF2L-230ENST00000491028 RBM38Q9H0Z9 239 aaKnown RBP15.85■□□□□ 0.13
MCF2L-230ENST00000491028 CXXC4Q9H2H0 198 aa15.85■□□□□ 0.13
MCF2L-230ENST00000491028 PPP1R3EQ9H7J1 279 aa15.85■□□□□ 0.13
MCF2L-230ENST00000491028 BATF3Q9NR55 127 aa15.85■□□□□ 0.13
MCF2L-230ENST00000491028 C14orf119Q9NWQ9 140 aa15.85■□□□□ 0.13
MCF2L-230ENST00000491028 NKIRAS2Q9NYR9 191 aa15.85■□□□□ 0.13
MCF2L-230ENST00000491028 H0YL77 283 aa15.84■□□□□ 0.13
MCF2L-230ENST00000491028 PDCD5O14737 125 aa15.84■□□□□ 0.13
MCF2L-230ENST00000491028 MAGEB3O15480 346 aa15.84■□□□□ 0.13
MCF2L-230ENST00000491028 SPRY3O43610 288 aa15.84■□□□□ 0.13
MCF2L-230ENST00000491028 IGHV1-46P01743 117 aa15.84■□□□□ 0.13
MCF2L-230ENST00000491028 CD55P08174 381 aa15.84■□□□□ 0.13
MCF2L-230ENST00000491028 NAT2P11245 290 aa15.84■□□□□ 0.13
MCF2L-230ENST00000491028 PRF1P14222 555 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms