RNA–Protein interactions for RNA: ENST00000490231.5

NUP58-213, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-213ENST00000490231 VPREB3Q9UKI3 123 aa12.87□□□□□ -0.35
NUP58-213ENST00000490231 CMYA5Q8N3K9 4069 aa12.87□□□□□ -0.35
NUP58-213ENST00000490231 A0A0G2JK05 382 aa12.86□□□□□ -0.35
NUP58-213ENST00000490231 SLC22A31A6NKX4 558 aa12.86□□□□□ -0.35
NUP58-213ENST00000490231 TMEM210A6NLX4 147 aa12.86□□□□□ -0.35
NUP58-213ENST00000490231 RNASEK-C17orf49H0YIS7 233 aa12.86□□□□□ -0.35
NUP58-213ENST00000490231 NPFFO15130 113 aa12.86□□□□□ -0.35
NUP58-213ENST00000490231 TSPAN9O75954 239 aa12.86□□□□□ -0.35
NUP58-213ENST00000490231 GLCEO94923 617 aa12.86□□□□□ -0.35
NUP58-213ENST00000490231 EEF1B2P24534 225 aaKnown RBP12.86□□□□□ -0.35
NUP58-213ENST00000490231 MXRA7P84157 204 aa12.86□□□□□ -0.35
NUP58-213ENST00000490231 GFOD2Q3B7J2 385 aa12.86□□□□□ -0.35
NUP58-213ENST00000490231 FAM76BQ5HYJ3 339 aa12.86□□□□□ -0.35
NUP58-213ENST00000490231 DHRS7BQ6IAN0 325 aaPredicted RBP12.86□□□□□ -0.35
NUP58-213ENST00000490231 OR2T5Q6IEZ7 315 aa12.86□□□□□ -0.35
NUP58-213ENST00000490231 CD300LDQ6UXZ3 194 aa12.86□□□□□ -0.35
NUP58-213ENST00000490231 ZNF788Q6ZQV5 615 aa12.86□□□□□ -0.35
NUP58-213ENST00000490231 C1orf122Q6ZSJ8 110 aa12.86□□□□□ -0.35
NUP58-213ENST00000490231 TIGD4Q8IY51 512 aa12.86□□□□□ -0.35
NUP58-213ENST00000490231 Q8N7P7 452 aa12.86□□□□□ -0.35
NUP58-213ENST00000490231 OR2T29Q8NH02 315 aa12.86□□□□□ -0.35
NUP58-213ENST00000490231 PGAM5Q96HS1 289 aa12.86□□□□□ -0.35
NUP58-213ENST00000490231 RAB3IPQ96QF0 476 aaPredicted RBP12.86□□□□□ -0.35
NUP58-213ENST00000490231 AMELYQ99218 206 aa12.86□□□□□ -0.35
NUP58-213ENST00000490231 SEMA6AQ9H2E6 1030 aa12.86□□□□□ -0.35
NUP58-213ENST00000490231 VNN3Q9NY84 501 aa12.86□□□□□ -0.35
NUP58-213ENST00000490231 SAMHD1Q9Y3Z3 626 aaKnown RBP12.86□□□□□ -0.35
NUP58-213ENST00000490231 U3KQV3 271 aa12.86□□□□□ -0.35
NUP58-213ENST00000490231 NKX6-3A6NJ46 265 aa12.85□□□□□ -0.35
NUP58-213ENST00000490231 FAM183AA6NL82 134 aa12.85□□□□□ -0.35
NUP58-213ENST00000490231 CST4P01036 141 aa12.85□□□□□ -0.35
NUP58-213ENST00000490231 H2BFMP0C1H6 154 aa12.85□□□□□ -0.35
NUP58-213ENST00000490231 TGFBR2P37173 567 aa12.85□□□□□ -0.35
NUP58-213ENST00000490231 MNAT1P51948 309 aa12.85□□□□□ -0.35
NUP58-213ENST00000490231 GK3PQ14409 553 aa12.85□□□□□ -0.35
NUP58-213ENST00000490231 LCN8Q6JVE9 175 aa12.85□□□□□ -0.35
NUP58-213ENST00000490231 OR5T2Q8NGG2 359 aa12.85□□□□□ -0.35
NUP58-213ENST00000490231 OR5R1Q8NH85 324 aa12.85□□□□□ -0.35
NUP58-213ENST00000490231 TEX47Q8TBZ9 253 aa12.85□□□□□ -0.35
NUP58-213ENST00000490231 OR5P3Q8WZ94 311 aa12.85□□□□□ -0.35
NUP58-213ENST00000490231 TNFRSF14Q92956 283 aa12.85□□□□□ -0.35
NUP58-213ENST00000490231 MED30Q96HR3 178 aa12.85□□□□□ -0.35
NUP58-213ENST00000490231 MUC13Q9H3R2 512 aa12.85□□□□□ -0.35
NUP58-213ENST00000490231 MED20Q9H944 212 aa12.85□□□□□ -0.35
NUP58-213ENST00000490231 BRD7Q9NPI1 651 aa12.85□□□□□ -0.35
NUP58-213ENST00000490231 DNAJB11Q9UBS4 358 aa12.85□□□□□ -0.35
NUP58-213ENST00000490231 ZNF391Q9UJN7 358 aa12.85□□□□□ -0.35
NUP58-213ENST00000490231 ARL2BPQ9Y2Y0 163 aa12.85□□□□□ -0.35
NUP58-213ENST00000490231 TGP01266 2768 aa12.84□□□□□ -0.35
NUP58-213ENST00000490231 ZNF850A8MQ14 1090 aa12.84□□□□□ -0.35
NUP58-213ENST00000490231 M0R1W7 72 aa12.84□□□□□ -0.35
NUP58-213ENST00000490231 ATP8B1O43520 1251 aa12.84□□□□□ -0.35
NUP58-213ENST00000490231 DCTN3O75935 186 aa12.84□□□□□ -0.35
NUP58-213ENST00000490231 LYNP07948 512 aa12.84□□□□□ -0.35
NUP58-213ENST00000490231 ACKR3P25106 362 aa12.84□□□□□ -0.35
NUP58-213ENST00000490231 UBE2E1P51965 193 aa12.84□□□□□ -0.35
NUP58-213ENST00000490231 PRDX4Q13162 271 aa12.84□□□□□ -0.35
NUP58-213ENST00000490231 FAM98BQ52LJ0 330 aaKnown RBP12.84□□□□□ -0.35
NUP58-213ENST00000490231 NCR3LG1Q68D85 454 aa12.84□□□□□ -0.35
NUP58-213ENST00000490231 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.84□□□□□ -0.35
NUP58-213ENST00000490231 ARHGAP24Q8N264 748 aa12.84□□□□□ -0.35
NUP58-213ENST00000490231 ZNF454Q8N9F8 522 aa12.84□□□□□ -0.35
NUP58-213ENST00000490231 OR10G2Q8NGC3 310 aa12.84□□□□□ -0.35
NUP58-213ENST00000490231 OTOSQ8NHW6 89 aa12.84□□□□□ -0.35
NUP58-213ENST00000490231 ANGPTL6Q8NI99 470 aa12.84□□□□□ -0.35
NUP58-213ENST00000490231 H1FXQ92522 213 aaKnown RBP12.84□□□□□ -0.35
NUP58-213ENST00000490231 RPL3LQ92901 407 aaKnown RBP12.84□□□□□ -0.35
NUP58-213ENST00000490231 GAFA1Q96PS6 74 aa12.84□□□□□ -0.35
NUP58-213ENST00000490231 PKP2Q99959 881 aa12.84□□□□□ -0.35
NUP58-213ENST00000490231 NIPSNAP1Q9BPW8 284 aa12.84□□□□□ -0.35
NUP58-213ENST00000490231 WDR13Q9H1Z4 485 aa12.84□□□□□ -0.35
NUP58-213ENST00000490231 SNTG1Q9NSN8 517 aa12.84□□□□□ -0.35
NUP58-213ENST00000490231 SLC25A10Q9UBX3 287 aaPredicted RBP12.84□□□□□ -0.35
NUP58-213ENST00000490231 SIGLEC5O15389 551 aa12.83□□□□□ -0.36
NUP58-213ENST00000490231 TSPAN15O95858 294 aa12.83□□□□□ -0.36
NUP58-213ENST00000490231 PAHP00439 452 aa12.83□□□□□ -0.36
NUP58-213ENST00000490231 SELLP14151 372 aa12.83□□□□□ -0.36
NUP58-213ENST00000490231 PAICSP22234 425 aaKnown RBP12.83□□□□□ -0.36
NUP58-213ENST00000490231 DCTDP32321 178 aa12.83□□□□□ -0.36
NUP58-213ENST00000490231 SAA4P35542 130 aa12.83□□□□□ -0.36
NUP58-213ENST00000490231 CAV3P56539 151 aa12.83□□□□□ -0.36
NUP58-213ENST00000490231 PRB3Q04118 309 aaPredicted RBP12.83□□□□□ -0.36
NUP58-213ENST00000490231 ACSM1Q08AH1 577 aa12.83□□□□□ -0.36
NUP58-213ENST00000490231 KLRD1Q13241 179 aa12.83□□□□□ -0.36
NUP58-213ENST00000490231 DGUOKQ16854 277 aa12.83□□□□□ -0.36
NUP58-213ENST00000490231 PIGWQ7Z7B1 504 aa12.83□□□□□ -0.36
NUP58-213ENST00000490231 DHFR2Q86XF0 187 aa12.83□□□□□ -0.36
NUP58-213ENST00000490231 OTULINQ96BN8 352 aa12.83□□□□□ -0.36
NUP58-213ENST00000490231 METTL8Q9H825 291 aaKnown RBP12.83□□□□□ -0.36
NUP58-213ENST00000490231 ZNF816-ZNF321PA0A0X1KG74 233 aa12.82□□□□□ -0.36
NUP58-213ENST00000490231 MEIOCA2RUB1 952 aa12.82□□□□□ -0.36
NUP58-213ENST00000490231 ARRDC5A6NEK1 342 aa12.82□□□□□ -0.36
NUP58-213ENST00000490231 H3BN98 237 aa12.82□□□□□ -0.36
NUP58-213ENST00000490231 AKR7A2O43488 359 aa12.82□□□□□ -0.36
NUP58-213ENST00000490231 ACAA1P09110 424 aaPredicted RBP12.82□□□□□ -0.36
NUP58-213ENST00000490231 DLX1P56177 255 aa12.82□□□□□ -0.36
NUP58-213ENST00000490231 GMFBP60983 142 aa12.82□□□□□ -0.36
NUP58-213ENST00000490231 TRIM25Q14258 630 aaKnown RBP12.82□□□□□ -0.36
NUP58-213ENST00000490231 C2orf68Q2NKX9 166 aa12.82□□□□□ -0.36
NUP58-213ENST00000490231 KCTD8Q6ZWB6 473 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms