RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 IGHV1-46P01743 117 aa10.49□□□□□ -0.73
TRAIP-209ENST00000488860 BMP4P12644 408 aa10.49□□□□□ -0.73
TRAIP-209ENST00000488860 TNFSF4P23510 183 aa10.49□□□□□ -0.73
TRAIP-209ENST00000488860 CALRP27797 417 aaKnown RBP10.49□□□□□ -0.73
TRAIP-209ENST00000488860 CDKN1AP38936 164 aa10.49□□□□□ -0.73
TRAIP-209ENST00000488860 PPOXP50336 477 aa10.49□□□□□ -0.73
TRAIP-209ENST00000488860 KRTAP10-9P60411 292 aa10.49□□□□□ -0.73
TRAIP-209ENST00000488860 LSM3P62310 102 aaKnown RBP10.49□□□□□ -0.73
TRAIP-209ENST00000488860 CNN3Q15417 329 aaKnown RBP10.49□□□□□ -0.73
TRAIP-209ENST00000488860 TIMM50Q3ZCQ8 353 aa10.49□□□□□ -0.73
TRAIP-209ENST00000488860 HSD17B12Q53GQ0 312 aa10.49□□□□□ -0.73
TRAIP-209ENST00000488860 GPR107Q5VW38 600 aa10.49□□□□□ -0.73
TRAIP-209ENST00000488860 C22orf42Q6IC83 251 aa10.49□□□□□ -0.73
TRAIP-209ENST00000488860 TMEM91Q6ZNR0 172 aa10.49□□□□□ -0.73
TRAIP-209ENST00000488860 SERPINA12Q8IW75 414 aa10.49□□□□□ -0.73
TRAIP-209ENST00000488860 PARP16Q8N5Y8 322 aa10.49□□□□□ -0.73
TRAIP-209ENST00000488860 PP6455Q8WZ26 134 aa10.49□□□□□ -0.73
TRAIP-209ENST00000488860 MICU1Q9BPX6 476 aa10.49□□□□□ -0.73
TRAIP-209ENST00000488860 RTL8AQ9BWD3 113 aa10.49□□□□□ -0.73
TRAIP-209ENST00000488860 FUNDC2Q9BWH2 189 aa10.49□□□□□ -0.73
TRAIP-209ENST00000488860 SLC22A4Q9H015 551 aa10.49□□□□□ -0.73
TRAIP-209ENST00000488860 LIME1Q9H400 295 aa10.49□□□□□ -0.73
TRAIP-209ENST00000488860 ABCB9Q9NP78 766 aa10.49□□□□□ -0.73
TRAIP-209ENST00000488860 NOP16Q9Y3C1 178 aaKnown RBP10.49□□□□□ -0.73
TRAIP-209ENST00000488860 MPC1Q9Y5U8 109 aa10.49□□□□□ -0.73
TRAIP-209ENST00000488860 PMF1-BGLAPU3KQ54 211 aa10.49□□□□□ -0.73
TRAIP-209ENST00000488860 DYSFO75923 2080 aa10.48□□□□□ -0.73
TRAIP-209ENST00000488860 TRAV8-7A0A075B6U6 113 aa10.48□□□□□ -0.73
TRAIP-209ENST00000488860 TRDV1A0A1B0GX56 115 aa10.48□□□□□ -0.73
TRAIP-209ENST00000488860 FAM230AA0A1W2PPH8 454 aa10.48□□□□□ -0.73
TRAIP-209ENST00000488860 PIN1P1O15428 100 aa10.48□□□□□ -0.73
TRAIP-209ENST00000488860 SULT1B1O43704 296 aa10.48□□□□□ -0.73
TRAIP-209ENST00000488860 AIREO43918 545 aa10.48□□□□□ -0.73
TRAIP-209ENST00000488860 GPX5O75715 221 aa10.48□□□□□ -0.73
TRAIP-209ENST00000488860 SC5DO75845 299 aa10.48□□□□□ -0.73
TRAIP-209ENST00000488860 ARL6IP5O75915 188 aa10.48□□□□□ -0.73
TRAIP-209ENST00000488860 MAS1P04201 325 aa10.48□□□□□ -0.73
TRAIP-209ENST00000488860 HCKP08631 526 aa10.48□□□□□ -0.73
TRAIP-209ENST00000488860 ATF1P18846 271 aa10.48□□□□□ -0.73
TRAIP-209ENST00000488860 FSTP19883 344 aa10.48□□□□□ -0.73
TRAIP-209ENST00000488860 RAB3AP20336 220 aa10.48□□□□□ -0.73
TRAIP-209ENST00000488860 MYL9P24844 172 aa10.48□□□□□ -0.73
TRAIP-209ENST00000488860 AZGP1P25311 298 aaKnown RBP10.48□□□□□ -0.73
TRAIP-209ENST00000488860 CRYBB2P43320 205 aa10.48□□□□□ -0.73
TRAIP-209ENST00000488860 TNFAIP6P98066 277 aaPredicted RBP10.48□□□□□ -0.73
TRAIP-209ENST00000488860 UBE2V2Q15819 145 aa10.48□□□□□ -0.73
TRAIP-209ENST00000488860 PAMR1Q6UXH9 720 aa10.48□□□□□ -0.73
TRAIP-209ENST00000488860 CLVS1Q8IUQ0 354 aaPredicted RBP10.48□□□□□ -0.73
TRAIP-209ENST00000488860 OR1M1Q8NGA1 313 aa10.48□□□□□ -0.73
TRAIP-209ENST00000488860 OR51A2Q8NGJ7 313 aa10.48□□□□□ -0.73
TRAIP-209ENST00000488860 OR5D14Q8NGL3 314 aa10.48□□□□□ -0.73
TRAIP-209ENST00000488860 HPSE2Q8WWQ2 592 aa10.48□□□□□ -0.73
TRAIP-209ENST00000488860 RPL3LQ92901 407 aaKnown RBP10.48□□□□□ -0.73
TRAIP-209ENST00000488860 ITFG2Q969R8 447 aa10.48□□□□□ -0.73
TRAIP-209ENST00000488860 SLITRK2Q9H156 845 aa10.48□□□□□ -0.73
TRAIP-209ENST00000488860 MS4A5Q9H3V2 200 aa10.48□□□□□ -0.73
TRAIP-209ENST00000488860 RNF167Q9H6Y7 350 aa10.48□□□□□ -0.73
TRAIP-209ENST00000488860 TCF7L1Q9HCS4 588 aa10.48□□□□□ -0.73
TRAIP-209ENST00000488860 TXNL4BQ9NX01 149 aaKnown RBP10.48□□□□□ -0.73
TRAIP-209ENST00000488860 NKIRAS2Q9NYR9 191 aa10.48□□□□□ -0.73
TRAIP-209ENST00000488860 ZDHHC8Q9ULC8 765 aa10.48□□□□□ -0.73
TRAIP-209ENST00000488860 SLC7A11Q9UPY5 501 aa10.48□□□□□ -0.73
TRAIP-209ENST00000488860 CELSR2Q9HCU4 2923 aa10.47□□□□□ -0.73
TRAIP-209ENST00000488860 CCDC160A6NGH7 325 aa10.47□□□□□ -0.73
TRAIP-209ENST00000488860 ZNF732B4DXR9 585 aa10.47□□□□□ -0.73
TRAIP-209ENST00000488860 NOL3O60936 208 aaKnown RBP10.47□□□□□ -0.73
TRAIP-209ENST00000488860 GRPP07492 148 aa10.47□□□□□ -0.73
TRAIP-209ENST00000488860 ERCC1P07992 297 aaPredicted RBP10.47□□□□□ -0.73
TRAIP-209ENST00000488860 UCHL1P09936 223 aa10.47□□□□□ -0.73
TRAIP-209ENST00000488860 THBS2P35442 1172 aa10.47□□□□□ -0.73
TRAIP-209ENST00000488860 GPM6AP51674 278 aa10.47□□□□□ -0.73
TRAIP-209ENST00000488860 CCL8P80075 99 aa10.47□□□□□ -0.73
TRAIP-209ENST00000488860 BLMHQ13867 455 aa10.47□□□□□ -0.73
TRAIP-209ENST00000488860 PRAMEF6Q5VXH4 476 aa10.47□□□□□ -0.73
TRAIP-209ENST00000488860 TMEM42Q69YG0 159 aa10.47□□□□□ -0.73
TRAIP-209ENST00000488860 ASPHD2Q6ICH7 369 aa10.47□□□□□ -0.73
TRAIP-209ENST00000488860 CD200R1LQ6Q8B3 271 aa10.47□□□□□ -0.73
TRAIP-209ENST00000488860 UNQ9370/PRO34162Q6UXP9 181 aa10.47□□□□□ -0.73
TRAIP-209ENST00000488860 UTS2BQ765I0 119 aa10.47□□□□□ -0.73
TRAIP-209ENST00000488860 ITLN1Q8WWA0 313 aa10.47□□□□□ -0.73
TRAIP-209ENST00000488860 OR5P3Q8WZ94 311 aa10.47□□□□□ -0.73
TRAIP-209ENST00000488860 RFT1Q96AA3 541 aa10.47□□□□□ -0.73
TRAIP-209ENST00000488860 ITPKCQ96DU7 683 aa10.47□□□□□ -0.73
TRAIP-209ENST00000488860 BORCS8Q96FH0 119 aa10.47□□□□□ -0.73
TRAIP-209ENST00000488860 RNF170Q96K19 258 aa10.47□□□□□ -0.73
TRAIP-209ENST00000488860 TECTBQ96PL2 329 aa10.47□□□□□ -0.73
TRAIP-209ENST00000488860 SORCS2Q96PQ0 1159 aa10.47□□□□□ -0.73
TRAIP-209ENST00000488860 SPACA5Q96QH8 159 aa10.47□□□□□ -0.73
TRAIP-209ENST00000488860 OR2V2Q96R30 315 aa10.47□□□□□ -0.73
TRAIP-209ENST00000488860 DIRC2Q96SL1 478 aa10.47□□□□□ -0.73
TRAIP-209ENST00000488860 CENPOQ9BU64 300 aa10.47□□□□□ -0.73
TRAIP-209ENST00000488860 FGF23Q9GZV9 251 aaPredicted RBP10.47□□□□□ -0.73
TRAIP-209ENST00000488860 NAA50Q9GZZ1 169 aaKnown RBP10.47□□□□□ -0.73
TRAIP-209ENST00000488860 CXXC4Q9H2H0 198 aa10.47□□□□□ -0.73
TRAIP-209ENST00000488860 PPIL3Q9H2H8 161 aaKnown RBP10.47□□□□□ -0.73
TRAIP-209ENST00000488860 CXorf56Q9H5V9 222 aa10.47□□□□□ -0.73
TRAIP-209ENST00000488860 SAP30LQ9HAJ7 183 aa10.47□□□□□ -0.73
TRAIP-209ENST00000488860 DECR2Q9NUI1 292 aa10.47□□□□□ -0.73
TRAIP-209ENST00000488860 FBXO9Q9UK97 447 aaPredicted RBP10.47□□□□□ -0.73
TRAIP-209ENST00000488860 PLEKHA6Q9Y2H5 1048 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms