RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 SPCS2Q15005 226 aa14.55□□□□□ -0.08
VIM-205ENST00000485947 TBC1D28Q2M2D7 210 aa14.55□□□□□ -0.08
VIM-205ENST00000485947 COLCA1Q6ZS62 124 aa14.55□□□□□ -0.08
VIM-205ENST00000485947 CEACAM19Q7Z692 300 aa14.55□□□□□ -0.08
VIM-205ENST00000485947 ZNF584Q8IVC4 421 aa14.55□□□□□ -0.08
VIM-205ENST00000485947 MAPK1IP1LQ8NDC0 245 aa14.55□□□□□ -0.08
VIM-205ENST00000485947 SLC30A7Q8NEW0 376 aa14.55□□□□□ -0.08
VIM-205ENST00000485947 OR13C5Q8NGS8 318 aa14.55□□□□□ -0.08
VIM-205ENST00000485947 ITFG2Q969R8 447 aa14.55□□□□□ -0.08
VIM-205ENST00000485947 PPP1R14AQ96A00 147 aa14.55□□□□□ -0.08
VIM-205ENST00000485947 BCL2L14Q9BZR8 327 aa14.55□□□□□ -0.08
VIM-205ENST00000485947 DCSTAMPQ9H295 470 aa14.55□□□□□ -0.08
VIM-205ENST00000485947 RGCCQ9H4X1 137 aa14.55□□□□□ -0.08
VIM-205ENST00000485947 DYNLRB1Q9NP97 96 aa14.55□□□□□ -0.08
VIM-205ENST00000485947 PTTG2Q9NZH5 202 aa14.55□□□□□ -0.08
VIM-205ENST00000485947 C5orf49A4QMS7 147 aa14.54□□□□□ -0.08
VIM-205ENST00000485947 A8MV72 311 aaPredicted RBP14.54□□□□□ -0.08
VIM-205ENST00000485947 M0R233 179 aa14.54□□□□□ -0.08
VIM-205ENST00000485947 TBX1O43435 398 aa14.54□□□□□ -0.08
VIM-205ENST00000485947 XRCC2O43543 280 aa14.54□□□□□ -0.08
VIM-205ENST00000485947 IGLV3-1P01715 115 aa14.54□□□□□ -0.08
VIM-205ENST00000485947 CD2P06729 351 aa14.54□□□□□ -0.08
VIM-205ENST00000485947 MYL9P24844 172 aa14.54□□□□□ -0.08
VIM-205ENST00000485947 SERPINB10P48595 397 aa14.54□□□□□ -0.08
VIM-205ENST00000485947 GZMKP49863 264 aa14.54□□□□□ -0.08
VIM-205ENST00000485947 MOGQ16653 247 aa14.54□□□□□ -0.08
VIM-205ENST00000485947 ODF4Q2M2E3 257 aa14.54□□□□□ -0.08
VIM-205ENST00000485947 CYB5R2Q6BCY4 276 aa14.54□□□□□ -0.08
VIM-205ENST00000485947 DOK3Q7L591 496 aa14.54□□□□□ -0.08
VIM-205ENST00000485947 TSEN15Q8WW01 171 aaKnown RBP14.54□□□□□ -0.08
VIM-205ENST00000485947 DERL3Q96Q80 235 aa14.54□□□□□ -0.08
VIM-205ENST00000485947 OR14A2Q96R54 314 aa14.54□□□□□ -0.08
VIM-205ENST00000485947 DHDHQ9UQ10 334 aa14.54□□□□□ -0.08
VIM-205ENST00000485947 TRBV5-7A0A0A0MS05 114 aa14.53□□□□□ -0.08
VIM-205ENST00000485947 A0A1W2PPW3 197 aa14.53□□□□□ -0.08
VIM-205ENST00000485947 P2RY10O00398 339 aa14.53□□□□□ -0.08
VIM-205ENST00000485947 SYT7O43581 403 aa14.53□□□□□ -0.08
VIM-205ENST00000485947 ICMTO60725 284 aa14.53□□□□□ -0.08
VIM-205ENST00000485947 IL1AP01583 271 aa14.53□□□□□ -0.08
VIM-205ENST00000485947 LCATP04180 440 aa14.53□□□□□ -0.08
VIM-205ENST00000485947 MTNR1BP49286 362 aa14.53□□□□□ -0.08
VIM-205ENST00000485947 MRPS11P82912 194 aaKnown RBP14.53□□□□□ -0.08
VIM-205ENST00000485947 INSL4Q14641 139 aa14.53□□□□□ -0.08
VIM-205ENST00000485947 Q6ZSR3 168 aa14.53□□□□□ -0.08
VIM-205ENST00000485947 NAA40Q86UY6 237 aa14.53□□□□□ -0.08
VIM-205ENST00000485947 RDH10Q8IZV5 341 aa14.53□□□□□ -0.08
VIM-205ENST00000485947 OR10AC1Q8NH08 325 aa14.53□□□□□ -0.08
VIM-205ENST00000485947 NDNFQ8TB73 568 aa14.53□□□□□ -0.08
VIM-205ENST00000485947 OR51E1Q8TCB6 317 aa14.53□□□□□ -0.08
VIM-205ENST00000485947 APOBEC3DQ96AK3 386 aaPredicted RBP14.53□□□□□ -0.08
VIM-205ENST00000485947 MRPL37Q9BZE1 423 aaKnown RBP14.53□□□□□ -0.08
VIM-205ENST00000485947 RNF167Q9H6Y7 350 aa14.53□□□□□ -0.08
VIM-205ENST00000485947 CDH20Q9HBT6 801 aa14.53□□□□□ -0.08
VIM-205ENST00000485947 TRAV1-2A0A0B4J238 106 aa14.52□□□□□ -0.09
VIM-205ENST00000485947 A0A1B0GTI1 187 aa14.52□□□□□ -0.09
VIM-205ENST00000485947 MTRF1O75570 445 aaKnown RBP14.52□□□□□ -0.09
VIM-205ENST00000485947 DAOP14920 347 aa14.52□□□□□ -0.09
VIM-205ENST00000485947 CFL1P23528 166 aaKnown RBP14.52□□□□□ -0.09
VIM-205ENST00000485947 CALRP27797 417 aaKnown RBP14.52□□□□□ -0.09
VIM-205ENST00000485947 TGFBR1P36897 503 aa14.52□□□□□ -0.09
VIM-205ENST00000485947 HSD17B12Q53GQ0 312 aa14.52□□□□□ -0.09
VIM-205ENST00000485947 RGS7BPQ6MZT1 257 aaPredicted RBP14.52□□□□□ -0.09
VIM-205ENST00000485947 TPRA1Q86W33 373 aa14.52□□□□□ -0.09
VIM-205ENST00000485947 COMMD2Q86X83 199 aa14.52□□□□□ -0.09
VIM-205ENST00000485947 PLPP7Q8NBV4 271 aa14.52□□□□□ -0.09
VIM-205ENST00000485947 OR51A4Q8NGJ6 313 aa14.52□□□□□ -0.09
VIM-205ENST00000485947 OR13C3Q8NGS6 347 aa14.52□□□□□ -0.09
VIM-205ENST00000485947 DYNC2LI1Q8TCX1 351 aa14.52□□□□□ -0.09
VIM-205ENST00000485947 UBASH3BQ8TF42 649 aa14.52□□□□□ -0.09
VIM-205ENST00000485947 HPS1Q92902 700 aa14.52□□□□□ -0.09
VIM-205ENST00000485947 TMEM106AQ96A25 262 aa14.52□□□□□ -0.09
VIM-205ENST00000485947 OPA3Q9H6K4 179 aa14.52□□□□□ -0.09
VIM-205ENST00000485947 NOX4Q9NPH5 578 aa14.52□□□□□ -0.09
VIM-205ENST00000485947 GPR84Q9NQS5 396 aa14.52□□□□□ -0.09
VIM-205ENST00000485947 YAE1D1Q9NRH1 226 aa14.52□□□□□ -0.09
VIM-205ENST00000485947 TBCCD1Q9NVR7 557 aa14.52□□□□□ -0.09
VIM-205ENST00000485947 ZNF319Q9P2F9 582 aa14.52□□□□□ -0.09
VIM-205ENST00000485947 N6AMT1Q9Y5N5 214 aa14.52□□□□□ -0.09
VIM-205ENST00000485947 CR1P17927 2039 aa14.52□□□□□ -0.09
VIM-205ENST00000485947 DHRS7CA6NNS2 312 aa14.51□□□□□ -0.09
VIM-205ENST00000485947 LY6HO94772 140 aa14.51□□□□□ -0.09
VIM-205ENST00000485947 ZNF250P15622 560 aa14.51□□□□□ -0.09
VIM-205ENST00000485947 FSTP19883 344 aa14.51□□□□□ -0.09
VIM-205ENST00000485947 CCNOP22674 350 aa14.51□□□□□ -0.09
VIM-205ENST00000485947 UCP2P55851 309 aa14.51□□□□□ -0.09
VIM-205ENST00000485947 SNAI3Q3KNW1 292 aa14.51□□□□□ -0.09
VIM-205ENST00000485947 SPSB4Q96A44 273 aa14.51□□□□□ -0.09
VIM-205ENST00000485947 C10orf35Q96D05 121 aa14.51□□□□□ -0.09
VIM-205ENST00000485947 SLITRK2Q9H156 845 aa14.51□□□□□ -0.09
VIM-205ENST00000485947 CCDC59Q9P031 241 aaKnown RBP14.51□□□□□ -0.09
VIM-205ENST00000485947 EIF3KQ9UBQ5 218 aaKnown RBP14.51□□□□□ -0.09
VIM-205ENST00000485947 LPAR3Q9UBY5 353 aa14.51□□□□□ -0.09
VIM-205ENST00000485947 CDC42EP3Q9UKI2 254 aa14.51□□□□□ -0.09
VIM-205ENST00000485947 IGLV3-9A0A075B6K5 115 aa14.5□□□□□ -0.09
VIM-205ENST00000485947 PIN1P1O15428 100 aa14.5□□□□□ -0.09
VIM-205ENST00000485947 DHRS3O75911 302 aa14.5□□□□□ -0.09
VIM-205ENST00000485947 CDRT1O95170 752 aa14.5□□□□□ -0.09
VIM-205ENST00000485947 IFNA2P01563 188 aa14.5□□□□□ -0.09
VIM-205ENST00000485947 TUBG1P23258 451 aa14.5□□□□□ -0.09
VIM-205ENST00000485947 SOX6P35712 828 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms