RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 BEX2Q9BXY8 128 aa3.02□□□□□ -1.93
VPS13A-211ENST00000484581 ZDHHC4Q9NPG8 344 aa3.02□□□□□ -1.93
VPS13A-211ENST00000484581 RAB23Q9ULC3 237 aa3.02□□□□□ -1.93
VPS13A-211ENST00000484581 NDRG2Q9UN36 371 aaKnown RBP3.02□□□□□ -1.93
VPS13A-211ENST00000484581 SIGLEC7Q9Y286 467 aa3.02□□□□□ -1.93
VPS13A-211ENST00000484581 WIF1Q9Y5W5 379 aa3.02□□□□□ -1.93
VPS13A-211ENST00000484581 ZNF646O15015 1829 aaPredicted RBP3.02□□□□□ -1.93
VPS13A-211ENST00000484581 TRAV19A0A0A6YYK7 116 aa3.01□□□□□ -1.93
VPS13A-211ENST00000484581 A0A1B0GTI1 187 aa3.01□□□□□ -1.93
VPS13A-211ENST00000484581 A0A1B0GVX0 72 aa3.01□□□□□ -1.93
VPS13A-211ENST00000484581 SLC5A10A0PJK1 596 aa3.01□□□□□ -1.93
VPS13A-211ENST00000484581 MKRN2OSH3BPM6 223 aa3.01□□□□□ -1.93
VPS13A-211ENST00000484581 TNFRSF11BO00300 401 aa3.01□□□□□ -1.93
VPS13A-211ENST00000484581 MYL12BO14950 172 aa3.01□□□□□ -1.93
VPS13A-211ENST00000484581 PSPHP1O15172 72 aa3.01□□□□□ -1.93
VPS13A-211ENST00000484581 ENSAO43768 121 aaKnown RBP3.01□□□□□ -1.93
VPS13A-211ENST00000484581 TRBV12-3P01733 135 aa3.01□□□□□ -1.93
VPS13A-211ENST00000484581 TPM3P06753 285 aa3.01□□□□□ -1.93
VPS13A-211ENST00000484581 GIMD1P0DJR0 217 aa3.01□□□□□ -1.93
VPS13A-211ENST00000484581 ANP32AP39687 249 aaKnown RBP3.01□□□□□ -1.93
VPS13A-211ENST00000484581 RPS10P46783 165 aaKnown RBP3.01□□□□□ -1.93
VPS13A-211ENST00000484581 PPOXP50336 477 aa3.01□□□□□ -1.93
VPS13A-211ENST00000484581 MTPNP58546 118 aa3.01□□□□□ -1.93
VPS13A-211ENST00000484581 RAP1AP62834 184 aa3.01□□□□□ -1.93
VPS13A-211ENST00000484581 CRADDP78560 199 aa3.01□□□□□ -1.93
VPS13A-211ENST00000484581 INCA1Q0VD86 236 aa3.01□□□□□ -1.93
VPS13A-211ENST00000484581 STX4Q12846 297 aa3.01□□□□□ -1.93
VPS13A-211ENST00000484581 SLAMF1Q13291 335 aa3.01□□□□□ -1.93
VPS13A-211ENST00000484581 BSXQ3C1V8 233 aa3.01□□□□□ -1.93
VPS13A-211ENST00000484581 CDNFQ49AH0 187 aa3.01□□□□□ -1.93
VPS13A-211ENST00000484581 C5orf47Q569G3 176 aa3.01□□□□□ -1.93
VPS13A-211ENST00000484581 SYT6Q5T7P8 510 aaPredicted RBP3.01□□□□□ -1.93
VPS13A-211ENST00000484581 TMEM236Q5W0B7 351 aa3.01□□□□□ -1.93
VPS13A-211ENST00000484581 CYB5R2Q6BCY4 276 aa3.01□□□□□ -1.93
VPS13A-211ENST00000484581 AHSA2Q719I0 299 aa3.01□□□□□ -1.93
VPS13A-211ENST00000484581 TRMT10CQ7L0Y3 403 aaKnown RBP3.01□□□□□ -1.93
VPS13A-211ENST00000484581 TMEM25Q86YD3 366 aa3.01□□□□□ -1.93
VPS13A-211ENST00000484581 C12orf56Q8IXR9 622 aa3.01□□□□□ -1.93
VPS13A-211ENST00000484581 C15orf56Q8N910 161 aa3.01□□□□□ -1.93
VPS13A-211ENST00000484581 Q8N976 141 aa3.01□□□□□ -1.93
VPS13A-211ENST00000484581 OR1S1Q8NH92 325 aa3.01□□□□□ -1.93
VPS13A-211ENST00000484581 SUN5Q8TC36 379 aa3.01□□□□□ -1.93
VPS13A-211ENST00000484581 RORBQ92753 470 aa3.01□□□□□ -1.93
VPS13A-211ENST00000484581 RERGQ96A58 199 aaPredicted RBP3.01□□□□□ -1.93
VPS13A-211ENST00000484581 KCNS1Q96KK3 526 aa3.01□□□□□ -1.93
VPS13A-211ENST00000484581 TMEM243Q9BU79 118 aa3.01□□□□□ -1.93
VPS13A-211ENST00000484581 ANGPTL4Q9BY76 406 aa3.01□□□□□ -1.93
VPS13A-211ENST00000484581 IFI27L2Q9H2X8 130 aa3.01□□□□□ -1.93
VPS13A-211ENST00000484581 PDFQ9HBH1 243 aa3.01□□□□□ -1.93
VPS13A-211ENST00000484581 TMBIM4Q9HC24 238 aa3.01□□□□□ -1.93
VPS13A-211ENST00000484581 DDIT4Q9NX09 232 aa3.01□□□□□ -1.93
VPS13A-211ENST00000484581 EURLQ9NYK6 297 aa3.01□□□□□ -1.93
VPS13A-211ENST00000484581 RBAKQ9NYW8 714 aaPredicted RBP3.01□□□□□ -1.93
VPS13A-211ENST00000484581 IGKV1-27A0A075B6S5 117 aa3□□□□□ -1.93
VPS13A-211ENST00000484581 TRBV6-6A0A0A6YYG2 114 aa3□□□□□ -1.93
VPS13A-211ENST00000484581 IGHV1OR15-9A0A0B4J2B8 117 aa3□□□□□ -1.93
VPS13A-211ENST00000484581 J3QT63 122 aa3□□□□□ -1.93
VPS13A-211ENST00000484581 SGCEO43556 437 aa3□□□□□ -1.93
VPS13A-211ENST00000484581 REM1O75628 298 aa3□□□□□ -1.93
VPS13A-211ENST00000484581 GP1BAP07359 652 aa3□□□□□ -1.93
VPS13A-211ENST00000484581 TLX1NBP0CAT3 122 aa3□□□□□ -1.93
VPS13A-211ENST00000484581 MAGEA6P43360 314 aa3□□□□□ -1.93
VPS13A-211ENST00000484581 CCR6P51684 374 aa3□□□□□ -1.93
VPS13A-211ENST00000484581 SKP1P63208 163 aa3□□□□□ -1.93
VPS13A-211ENST00000484581 CDK5Q00535 292 aa3□□□□□ -1.93
VPS13A-211ENST00000484581 PPIDQ08752 370 aaKnown RBP3□□□□□ -1.93
VPS13A-211ENST00000484581 NAB1Q13506 487 aa3□□□□□ -1.93
VPS13A-211ENST00000484581 PNOCQ13519 176 aa3□□□□□ -1.93
VPS13A-211ENST00000484581 COTL1Q14019 142 aa3□□□□□ -1.93
VPS13A-211ENST00000484581 TMEM205Q6UW68 189 aa3□□□□□ -1.93
VPS13A-211ENST00000484581 Q6ZT83 130 aa3□□□□□ -1.93
VPS13A-211ENST00000484581 BHLHA15Q7RTS1 189 aaPredicted RBP3□□□□□ -1.93
VPS13A-211ENST00000484581 CYP4Z1Q86W10 505 aa3□□□□□ -1.93
VPS13A-211ENST00000484581 LGI3Q8N145 548 aa3□□□□□ -1.93
VPS13A-211ENST00000484581 ATPAF2Q8N5M1 289 aa3□□□□□ -1.93
VPS13A-211ENST00000484581 LRRC52Q8N7C0 313 aa3□□□□□ -1.93
VPS13A-211ENST00000484581 OR2L8Q8NGY9 312 aa3□□□□□ -1.93
VPS13A-211ENST00000484581 OR51Q1Q8NH59 317 aa3□□□□□ -1.93
VPS13A-211ENST00000484581 CDS1Q92903 461 aa3□□□□□ -1.93
VPS13A-211ENST00000484581 Q96MT0 163 aa3□□□□□ -1.93
VPS13A-211ENST00000484581 VAT1Q99536 393 aa3□□□□□ -1.93
VPS13A-211ENST00000484581 CTRCQ99895 268 aa3□□□□□ -1.93
VPS13A-211ENST00000484581 SFXN3Q9BWM7 321 aa3□□□□□ -1.93
VPS13A-211ENST00000484581 METTL8Q9H825 291 aaKnown RBP3□□□□□ -1.93
VPS13A-211ENST00000484581 HEBP1Q9NRV9 189 aa3□□□□□ -1.93
VPS13A-211ENST00000484581 RBFOX1Q9NWB1 397 aaKnown RBP3□□□□□ -1.93
VPS13A-211ENST00000484581 RPS6KB2Q9UBS0 482 aa3□□□□□ -1.93
VPS13A-211ENST00000484581 URGCP-MRPS24S4R325 110 aa3□□□□□ -1.93
VPS13A-211ENST00000484581 ADAMTS13Q76LX8 1427 aa3□□□□□ -1.93
VPS13A-211ENST00000484581 TP53BP1Q12888 1972 aaPredicted RBP3□□□□□ -1.93
VPS13A-211ENST00000484581 LRPPRCP42704 1394 aaKnown RBP3□□□□□ -1.93
VPS13A-211ENST00000484581 MEGF6O75095 1541 aa2.99□□□□□ -1.93
VPS13A-211ENST00000484581 DYSFO75923 2080 aa2.99□□□□□ -1.93
VPS13A-211ENST00000484581 TSPOAP1O95153 1857 aa2.99□□□□□ -1.93
VPS13A-211ENST00000484581 A0A0U1RQV1 116 aa2.99□□□□□ -1.93
VPS13A-211ENST00000484581 TMEM213A2RRL7 107 aa2.99□□□□□ -1.93
VPS13A-211ENST00000484581 ZNF705GA8MUZ8 300 aaPredicted RBP2.99□□□□□ -1.93
VPS13A-211ENST00000484581 KRBOX1C9JBD0 128 aa2.99□□□□□ -1.93
VPS13A-211ENST00000484581 F8VZ95 297 aa2.99□□□□□ -1.93
VPS13A-211ENST00000484581 CLDN34H7C241 214 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms