RNA–Protein interactions for RNA: ENST00000482879.5

SDC1-206, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-206ENST00000482879 OR10AD1Q8NGE0 317 aa10.42□□□□□ -0.74
SDC1-206ENST00000482879 OR8S1Q8NH09 359 aa10.42□□□□□ -0.74
SDC1-206ENST00000482879 PHYHIPQ92561 330 aa10.42□□□□□ -0.74
SDC1-206ENST00000482879 DVL3Q92997 716 aaPredicted RBP10.42□□□□□ -0.74
SDC1-206ENST00000482879 ORAI1Q96D31 301 aa10.42□□□□□ -0.74
SDC1-206ENST00000482879 ELMOD3Q96FG2 381 aa10.42□□□□□ -0.74
SDC1-206ENST00000482879 VRK1Q99986 396 aaPredicted RBP10.42□□□□□ -0.74
SDC1-206ENST00000482879 CHCHD6Q9BRQ6 235 aa10.42□□□□□ -0.74
SDC1-206ENST00000482879 ADAT1Q9BUB4 502 aaKnown RBP10.42□□□□□ -0.74
SDC1-206ENST00000482879 CACNG6Q9BXT2 260 aa10.42□□□□□ -0.74
SDC1-206ENST00000482879 CHST5Q9GZS9 411 aa10.42□□□□□ -0.74
SDC1-206ENST00000482879 OR51E2Q9H255 320 aa10.42□□□□□ -0.74
SDC1-206ENST00000482879 LIME1Q9H400 295 aa10.42□□□□□ -0.74
SDC1-206ENST00000482879 ABCB9Q9NP78 766 aa10.42□□□□□ -0.74
SDC1-206ENST00000482879 TAS2R4Q9NYW5 299 aa10.42□□□□□ -0.74
SDC1-206ENST00000482879 ZDHHC8Q9ULC8 765 aa10.42□□□□□ -0.74
SDC1-206ENST00000482879 NOP16Q9Y3C1 178 aaKnown RBP10.42□□□□□ -0.74
SDC1-206ENST00000482879 DYSFO75923 2080 aa10.42□□□□□ -0.74
SDC1-206ENST00000482879 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.41□□□□□ -0.74
SDC1-206ENST00000482879 LOC100506127A0A0U1RQW1 187 aa10.41□□□□□ -0.74
SDC1-206ENST00000482879 A0A1B0GWJ7 208 aa10.41□□□□□ -0.74
SDC1-206ENST00000482879 F5H5P2 479 aa10.41□□□□□ -0.74
SDC1-206ENST00000482879 PIN1P1O15428 100 aa10.41□□□□□ -0.74
SDC1-206ENST00000482879 MLNRO43193 412 aa10.41□□□□□ -0.74
SDC1-206ENST00000482879 IGHV1-46P01743 117 aa10.41□□□□□ -0.74
SDC1-206ENST00000482879 ATF1P18846 271 aa10.41□□□□□ -0.74
SDC1-206ENST00000482879 GALP22466 123 aa10.41□□□□□ -0.74
SDC1-206ENST00000482879 TNFSF4P23510 183 aa10.41□□□□□ -0.74
SDC1-206ENST00000482879 PPOXP50336 477 aa10.41□□□□□ -0.74
SDC1-206ENST00000482879 UBE2V2Q15819 145 aa10.41□□□□□ -0.74
SDC1-206ENST00000482879 TIMM50Q3ZCQ8 353 aa10.41□□□□□ -0.74
SDC1-206ENST00000482879 HSD17B12Q53GQ0 312 aa10.41□□□□□ -0.74
SDC1-206ENST00000482879 GPR107Q5VW38 600 aa10.41□□□□□ -0.74
SDC1-206ENST00000482879 C22orf42Q6IC83 251 aa10.41□□□□□ -0.74
SDC1-206ENST00000482879 SPERTQ8NA61 448 aa10.41□□□□□ -0.74
SDC1-206ENST00000482879 OR13C9Q8NGT0 318 aa10.41□□□□□ -0.74
SDC1-206ENST00000482879 UBASH3BQ8TF42 649 aa10.41□□□□□ -0.74
SDC1-206ENST00000482879 NPRL2Q8WTW4 380 aa10.41□□□□□ -0.74
SDC1-206ENST00000482879 OR5P3Q8WZ94 311 aa10.41□□□□□ -0.74
SDC1-206ENST00000482879 NRGNQ92686 78 aa10.41□□□□□ -0.74
SDC1-206ENST00000482879 TRMT61AQ96FX7 289 aaKnown RBP10.41□□□□□ -0.74
SDC1-206ENST00000482879 RNF170Q96K19 258 aa10.41□□□□□ -0.74
SDC1-206ENST00000482879 DIRC2Q96SL1 478 aa10.41□□□□□ -0.74
SDC1-206ENST00000482879 CCL19Q99731 98 aa10.41□□□□□ -0.74
SDC1-206ENST00000482879 MICU1Q9BPX6 476 aa10.41□□□□□ -0.74
SDC1-206ENST00000482879 FUNDC2Q9BWH2 189 aa10.41□□□□□ -0.74
SDC1-206ENST00000482879 CXXC4Q9H2H0 198 aa10.41□□□□□ -0.74
SDC1-206ENST00000482879 PPIL3Q9H2H8 161 aaKnown RBP10.41□□□□□ -0.74
SDC1-206ENST00000482879 TPK1Q9H3S4 243 aa10.41□□□□□ -0.74
SDC1-206ENST00000482879 CKLFQ9UBR5 152 aa10.41□□□□□ -0.74
SDC1-206ENST00000482879 SLC7A11Q9UPY5 501 aa10.41□□□□□ -0.74
SDC1-206ENST00000482879 BAHCC1Q9P281 2608 aa10.41□□□□□ -0.74
SDC1-206ENST00000482879 CELSR2Q9HCU4 2923 aa10.4□□□□□ -0.74
SDC1-206ENST00000482879 TPD52L2O43399 206 aaKnown RBP10.4□□□□□ -0.74
SDC1-206ENST00000482879 SULT1B1O43704 296 aa10.4□□□□□ -0.74
SDC1-206ENST00000482879 AIREO43918 545 aa10.4□□□□□ -0.74
SDC1-206ENST00000482879 ARL6IP5O75915 188 aa10.4□□□□□ -0.74
SDC1-206ENST00000482879 ADH4P08319 380 aa10.4□□□□□ -0.74
SDC1-206ENST00000482879 UCHL1P09936 223 aa10.4□□□□□ -0.74
SDC1-206ENST00000482879 OCMP0CE72 109 aaPredicted RBP10.4□□□□□ -0.74
SDC1-206ENST00000482879 IGFBP3P17936 291 aaPredicted RBP10.4□□□□□ -0.74
SDC1-206ENST00000482879 RAB3AP20336 220 aa10.4□□□□□ -0.74
SDC1-206ENST00000482879 FGF9P31371 208 aaPredicted RBP10.4□□□□□ -0.74
SDC1-206ENST00000482879 PPP3R1P63098 170 aa10.4□□□□□ -0.74
SDC1-206ENST00000482879 TNFAIP6P98066 277 aaPredicted RBP10.4□□□□□ -0.74
SDC1-206ENST00000482879 MZT1Q08AG7 82 aa10.4□□□□□ -0.74
SDC1-206ENST00000482879 CNN3Q15417 329 aaKnown RBP10.4□□□□□ -0.74
SDC1-206ENST00000482879 CEACAM21Q3KPI0 293 aa10.4□□□□□ -0.74
SDC1-206ENST00000482879 ASPHD2Q6ICH7 369 aa10.4□□□□□ -0.74
SDC1-206ENST00000482879 SATL1Q86VE3 508 aa10.4□□□□□ -0.74
SDC1-206ENST00000482879 OR1M1Q8NGA1 313 aa10.4□□□□□ -0.74
SDC1-206ENST00000482879 OR5A2Q8NGI9 324 aa10.4□□□□□ -0.74
SDC1-206ENST00000482879 TRMT10AQ8TBZ6 339 aaKnown RBP10.4□□□□□ -0.74
SDC1-206ENST00000482879 RPL3LQ92901 407 aaKnown RBP10.4□□□□□ -0.74
SDC1-206ENST00000482879 ITPKCQ96DU7 683 aa10.4□□□□□ -0.74
SDC1-206ENST00000482879 TECTBQ96PL2 329 aa10.4□□□□□ -0.74
SDC1-206ENST00000482879 RTL8AQ9BWD3 113 aa10.4□□□□□ -0.74
SDC1-206ENST00000482879 RAB1BQ9H0U4 201 aa10.4□□□□□ -0.74
SDC1-206ENST00000482879 NEK6Q9HC98 313 aa10.4□□□□□ -0.74
SDC1-206ENST00000482879 TCF7L1Q9HCS4 588 aa10.4□□□□□ -0.74
SDC1-206ENST00000482879 TXNL4BQ9NX01 149 aaKnown RBP10.4□□□□□ -0.74
SDC1-206ENST00000482879 NKIRAS2Q9NYR9 191 aa10.4□□□□□ -0.74
SDC1-206ENST00000482879 FOXJ3Q9UPW0 622 aa10.4□□□□□ -0.74
SDC1-206ENST00000482879 GSTK1Q9Y2Q3 226 aa10.4□□□□□ -0.74
SDC1-206ENST00000482879 TRAV8-7A0A075B6U6 113 aa10.39□□□□□ -0.75
SDC1-206ENST00000482879 IGKV1-9A0A0C4DH69 117 aa10.39□□□□□ -0.75
SDC1-206ENST00000482879 IGHV3-64DA0A0J9YX35 117 aa10.39□□□□□ -0.75
SDC1-206ENST00000482879 FAM230AA0A1W2PPH8 454 aa10.39□□□□□ -0.75
SDC1-206ENST00000482879 ZNF732B4DXR9 585 aa10.39□□□□□ -0.75
SDC1-206ENST00000482879 OVOL3O00110 214 aa10.39□□□□□ -0.75
SDC1-206ENST00000482879 ALX3O95076 343 aa10.39□□□□□ -0.75
SDC1-206ENST00000482879 MAS1P04201 325 aa10.39□□□□□ -0.75
SDC1-206ENST00000482879 ERCC1P07992 297 aaPredicted RBP10.39□□□□□ -0.75
SDC1-206ENST00000482879 CD55P08174 381 aa10.39□□□□□ -0.75
SDC1-206ENST00000482879 SRMP19623 302 aa10.39□□□□□ -0.75
SDC1-206ENST00000482879 FSTP19883 344 aa10.39□□□□□ -0.75
SDC1-206ENST00000482879 PRKACBP22694 351 aa10.39□□□□□ -0.75
SDC1-206ENST00000482879 AZGP1P25311 298 aaKnown RBP10.39□□□□□ -0.75
SDC1-206ENST00000482879 CALRP27797 417 aaKnown RBP10.39□□□□□ -0.75
SDC1-206ENST00000482879 CDKN1AP38936 164 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms