RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 RHBDD3Q9Y3P4 386 aa10.88□□□□□ -0.67
VCL-205ENST00000478896 WNK1Q9H4A3 2382 aa10.88□□□□□ -0.67
VCL-205ENST00000478896 ZNF816-ZNF321PA0A0X1KG74 233 aa10.87□□□□□ -0.67
VCL-205ENST00000478896 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.87□□□□□ -0.67
VCL-205ENST00000478896 CSF1P09603 554 aa10.87□□□□□ -0.67
VCL-205ENST00000478896 H2BFMP0C1H6 154 aa10.87□□□□□ -0.67
VCL-205ENST00000478896 NDUFB7P17568 137 aa10.87□□□□□ -0.67
VCL-205ENST00000478896 POU1F1P28069 291 aa10.87□□□□□ -0.67
VCL-205ENST00000478896 SAA4P35542 130 aa10.87□□□□□ -0.67
VCL-205ENST00000478896 HMGA2P52926 109 aa10.87□□□□□ -0.67
VCL-205ENST00000478896 PRDX4Q13162 271 aa10.87□□□□□ -0.67
VCL-205ENST00000478896 BLMHQ13867 455 aa10.87□□□□□ -0.67
VCL-205ENST00000478896 NCR3LG1Q68D85 454 aa10.87□□□□□ -0.67
VCL-205ENST00000478896 ZNF770Q6IQ21 691 aaPredicted RBP10.87□□□□□ -0.67
VCL-205ENST00000478896 SHFQ7M4L6 423 aa10.87□□□□□ -0.67
VCL-205ENST00000478896 CPLX4Q7Z7G2 160 aa10.87□□□□□ -0.67
VCL-205ENST00000478896 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.87□□□□□ -0.67
VCL-205ENST00000478896 OR5R1Q8NH85 324 aa10.87□□□□□ -0.67
VCL-205ENST00000478896 TEX47Q8TBZ9 253 aa10.87□□□□□ -0.67
VCL-205ENST00000478896 RNF133Q8WVZ7 376 aa10.87□□□□□ -0.67
VCL-205ENST00000478896 RPL3LQ92901 407 aaKnown RBP10.87□□□□□ -0.67
VCL-205ENST00000478896 ITPKCQ96DU7 683 aa10.87□□□□□ -0.67
VCL-205ENST00000478896 ABHD6Q9BV23 337 aa10.87□□□□□ -0.67
VCL-205ENST00000478896 NMNAT2Q9BZQ4 307 aa10.87□□□□□ -0.67
VCL-205ENST00000478896 DNTTIP1Q9H147 329 aa10.87□□□□□ -0.67
VCL-205ENST00000478896 TLNRD1Q9H1K6 362 aa10.87□□□□□ -0.67
VCL-205ENST00000478896 PPA2Q9H2U2 334 aa10.87□□□□□ -0.67
VCL-205ENST00000478896 RGCCQ9H4X1 137 aa10.87□□□□□ -0.67
VCL-205ENST00000478896 ABCB9Q9NP78 766 aa10.87□□□□□ -0.67
VCL-205ENST00000478896 TAGLN3Q9UI15 199 aa10.87□□□□□ -0.67
VCL-205ENST00000478896 MPC1Q9Y5U8 109 aa10.87□□□□□ -0.67
VCL-205ENST00000478896 U3KQV3 271 aa10.87□□□□□ -0.67
VCL-205ENST00000478896 FAM183AA6NL82 134 aa10.86□□□□□ -0.67
VCL-205ENST00000478896 TMEM210A6NLX4 147 aa10.86□□□□□ -0.67
VCL-205ENST00000478896 ZNF850A8MQ14 1090 aa10.86□□□□□ -0.67
VCL-205ENST00000478896 AKR7A2O43488 359 aa10.86□□□□□ -0.67
VCL-205ENST00000478896 TSPAN9O75954 239 aa10.86□□□□□ -0.67
VCL-205ENST00000478896 GSTT1P30711 240 aa10.86□□□□□ -0.67
VCL-205ENST00000478896 KLHL12Q53G59 568 aa10.86□□□□□ -0.67
VCL-205ENST00000478896 LINC01590Q5TEZ4 76 aa10.86□□□□□ -0.67
VCL-205ENST00000478896 Q6ZTK2 550 aa10.86□□□□□ -0.67
VCL-205ENST00000478896 TIGD4Q8IY51 512 aa10.86□□□□□ -0.67
VCL-205ENST00000478896 PNKDQ8N490 385 aa10.86□□□□□ -0.67
VCL-205ENST00000478896 GALNT4Q8N4A0 578 aa10.86□□□□□ -0.67
VCL-205ENST00000478896 Q8N7P7 452 aa10.86□□□□□ -0.67
VCL-205ENST00000478896 OR10Z1Q8NGY1 313 aa10.86□□□□□ -0.67
VCL-205ENST00000478896 C8orf46Q8TAG6 207 aa10.86□□□□□ -0.67
VCL-205ENST00000478896 PIGCQ92535 297 aa10.86□□□□□ -0.67
VCL-205ENST00000478896 WDR13Q9H1Z4 485 aa10.86□□□□□ -0.67
VCL-205ENST00000478896 REEP1Q9H902 201 aa10.86□□□□□ -0.67
VCL-205ENST00000478896 MED20Q9H944 212 aa10.86□□□□□ -0.67
VCL-205ENST00000478896 SAMHD1Q9Y3Z3 626 aaKnown RBP10.86□□□□□ -0.67
VCL-205ENST00000478896 H3BN98 237 aa10.85□□□□□ -0.67
VCL-205ENST00000478896 M0R1W7 72 aa10.85□□□□□ -0.67
VCL-205ENST00000478896 SNX3O60493 162 aa10.85□□□□□ -0.67
VCL-205ENST00000478896 TFF1P04155 84 aa10.85□□□□□ -0.67
VCL-205ENST00000478896 LYNP07948 512 aa10.85□□□□□ -0.67
VCL-205ENST00000478896 AMY2BP19961 511 aa10.85□□□□□ -0.67
VCL-205ENST00000478896 ATP6V1B2P21281 511 aa10.85□□□□□ -0.67
VCL-205ENST00000478896 PAICSP22234 425 aaKnown RBP10.85□□□□□ -0.67
VCL-205ENST00000478896 GLRA1P23415 457 aa10.85□□□□□ -0.67
VCL-205ENST00000478896 GABRA5P31644 462 aa10.85□□□□□ -0.67
VCL-205ENST00000478896 OPRL1P41146 370 aa10.85□□□□□ -0.67
VCL-205ENST00000478896 MAGEA2P43356 314 aa10.85□□□□□ -0.67
VCL-205ENST00000478896 GABRA2P47869 451 aa10.85□□□□□ -0.67
VCL-205ENST00000478896 TGM4P49221 684 aa10.85□□□□□ -0.67
VCL-205ENST00000478896 DGUOKQ16854 277 aa10.85□□□□□ -0.67
VCL-205ENST00000478896 MICAQ29983 383 aa10.85□□□□□ -0.67
VCL-205ENST00000478896 SPATS1Q496A3 300 aa10.85□□□□□ -0.67
VCL-205ENST00000478896 ATPAF1Q5TC12 328 aaPredicted RBP10.85□□□□□ -0.67
VCL-205ENST00000478896 PRSS45Q7RTY3 260 aa10.85□□□□□ -0.67
VCL-205ENST00000478896 ZDHHC23Q8IYP9 409 aa10.85□□□□□ -0.67
VCL-205ENST00000478896 PAPD5Q8NDF8 572 aaKnown RBP10.85□□□□□ -0.67
VCL-205ENST00000478896 FAM81AQ8TBF8 368 aa10.85□□□□□ -0.67
VCL-205ENST00000478896 MED30Q96HR3 178 aa10.85□□□□□ -0.67
VCL-205ENST00000478896 RNF170Q96K19 258 aa10.85□□□□□ -0.67
VCL-205ENST00000478896 GAFA1Q96PS6 74 aa10.85□□□□□ -0.67
VCL-205ENST00000478896 RAB3IPQ96QF0 476 aaPredicted RBP10.85□□□□□ -0.67
VCL-205ENST00000478896 AMELYQ99218 206 aa10.85□□□□□ -0.67
VCL-205ENST00000478896 DGCR6LQ9BY27 220 aa10.85□□□□□ -0.67
VCL-205ENST00000478896 OR51V1Q9H2C8 321 aa10.85□□□□□ -0.67
VCL-205ENST00000478896 METTL8Q9H825 291 aaKnown RBP10.85□□□□□ -0.67
VCL-205ENST00000478896 CMC2Q9NRP2 79 aa10.85□□□□□ -0.67
VCL-205ENST00000478896 ACTR3BQ9P1U1 418 aa10.85□□□□□ -0.67
VCL-205ENST00000478896 ZNF319Q9P2F9 582 aa10.85□□□□□ -0.67
VCL-205ENST00000478896 NLKQ9UBE8 527 aa10.85□□□□□ -0.67
VCL-205ENST00000478896 PKD1L1Q8TDX9 2849 aa10.84□□□□□ -0.67
VCL-205ENST00000478896 H0YAE9 185 aa10.84□□□□□ -0.67
VCL-205ENST00000478896 H3BUX3 64 aa10.84□□□□□ -0.67
VCL-205ENST00000478896 SIGLEC5O15389 551 aa10.84□□□□□ -0.67
VCL-205ENST00000478896 GLCEO94923 617 aa10.84□□□□□ -0.67
VCL-205ENST00000478896 UBE2E1P51965 193 aa10.84□□□□□ -0.67
VCL-205ENST00000478896 ACSM1Q08AH1 577 aa10.84□□□□□ -0.67
VCL-205ENST00000478896 SLC35E4Q6ICL7 350 aa10.84□□□□□ -0.67
VCL-205ENST00000478896 OR2T5Q6IEZ7 315 aa10.84□□□□□ -0.67
VCL-205ENST00000478896 ZNF788Q6ZQV5 615 aa10.84□□□□□ -0.67
VCL-205ENST00000478896 FAM185AQ8N0U4 392 aa10.84□□□□□ -0.67
VCL-205ENST00000478896 IQCF1Q8N6M8 205 aa10.84□□□□□ -0.67
VCL-205ENST00000478896 TMEM185AQ8NFB2 350 aa10.84□□□□□ -0.67
VCL-205ENST00000478896 OR10G2Q8NGC3 310 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms