RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 TMEM178BH3BS89 294 aa8.64□□□□□ -1.03
HDAC6-222ENST00000478095 SYT7O43581 403 aa8.64□□□□□ -1.03
HDAC6-222ENST00000478095 LMX1BO60663 402 aa8.64□□□□□ -1.03
HDAC6-222ENST00000478095 MTRF1O75570 445 aaKnown RBP8.64□□□□□ -1.03
HDAC6-222ENST00000478095 CST4P01036 141 aa8.64□□□□□ -1.03
HDAC6-222ENST00000478095 IGHV2-70P01814 119 aa8.64□□□□□ -1.03
HDAC6-222ENST00000478095 HTR1AP08908 422 aa8.64□□□□□ -1.03
HDAC6-222ENST00000478095 LIMS3P0CW19 117 aa8.64□□□□□ -1.03
HDAC6-222ENST00000478095 LIMS4P0CW20 117 aa8.64□□□□□ -1.03
HDAC6-222ENST00000478095 IRF2P14316 349 aa8.64□□□□□ -1.03
HDAC6-222ENST00000478095 THBS2P35442 1172 aa8.64□□□□□ -1.03
HDAC6-222ENST00000478095 GATA4P43694 442 aa8.64□□□□□ -1.03
HDAC6-222ENST00000478095 ETV1P50549 477 aa8.64□□□□□ -1.03
HDAC6-222ENST00000478095 BTG1P62324 171 aa8.64□□□□□ -1.03
HDAC6-222ENST00000478095 RIPPLY1Q0D2K3 151 aa8.64□□□□□ -1.03
HDAC6-222ENST00000478095 ZMYND11Q15326 602 aa8.64□□□□□ -1.03
HDAC6-222ENST00000478095 OR2G6Q5TZ20 316 aa8.64□□□□□ -1.03
HDAC6-222ENST00000478095 KCTD8Q6ZWB6 473 aa8.64□□□□□ -1.03
HDAC6-222ENST00000478095 DOK3Q7L591 496 aa8.64□□□□□ -1.03
HDAC6-222ENST00000478095 KCTD20Q7Z5Y7 419 aa8.64□□□□□ -1.03
HDAC6-222ENST00000478095 KLBQ86Z14 1044 aa8.64□□□□□ -1.03
HDAC6-222ENST00000478095 ZDHHC23Q8IYP9 409 aa8.64□□□□□ -1.03
HDAC6-222ENST00000478095 SYS1Q8N2H4 156 aa8.64□□□□□ -1.03
HDAC6-222ENST00000478095 CELF2-AS1Q8N7Q2 184 aa8.64□□□□□ -1.03
HDAC6-222ENST00000478095 SPERTQ8NA61 448 aa8.64□□□□□ -1.03
HDAC6-222ENST00000478095 OR1M1Q8NGA1 313 aa8.64□□□□□ -1.03
HDAC6-222ENST00000478095 OR14K1Q8NGZ2 314 aa8.64□□□□□ -1.03
HDAC6-222ENST00000478095 FBLIM1Q8WUP2 373 aa8.64□□□□□ -1.03
HDAC6-222ENST00000478095 HPSE2Q8WWQ2 592 aa8.64□□□□□ -1.03
HDAC6-222ENST00000478095 GGHQ92820 318 aa8.64□□□□□ -1.03
HDAC6-222ENST00000478095 MSI2Q96DH6 328 aaKnown RBP8.64□□□□□ -1.03
HDAC6-222ENST00000478095 MICU1Q9BPX6 476 aa8.64□□□□□ -1.03
HDAC6-222ENST00000478095 RTL8AQ9BWD3 113 aa8.64□□□□□ -1.03
HDAC6-222ENST00000478095 FN3KRPQ9HA64 309 aa8.64□□□□□ -1.03
HDAC6-222ENST00000478095 LPAR2Q9HBW0 351 aa8.64□□□□□ -1.03
HDAC6-222ENST00000478095 FGF20Q9NP95 211 aaPredicted RBP8.64□□□□□ -1.03
HDAC6-222ENST00000478095 YAE1D1Q9NRH1 226 aa8.64□□□□□ -1.03
HDAC6-222ENST00000478095 GPR173Q9NS66 373 aa8.64□□□□□ -1.03
HDAC6-222ENST00000478095 FRRS1LQ9P0K9 344 aa8.64□□□□□ -1.03
HDAC6-222ENST00000478095 CLEC2DQ9UHP7 191 aa8.64□□□□□ -1.03
HDAC6-222ENST00000478095 ENPP5Q9UJA9 477 aa8.64□□□□□ -1.03
HDAC6-222ENST00000478095 DIMT1Q9UNQ2 313 aaKnown RBP8.64□□□□□ -1.03
HDAC6-222ENST00000478095 MPC1Q9Y5U8 109 aa8.64□□□□□ -1.03
HDAC6-222ENST00000478095 V9GYS6 101 aa8.64□□□□□ -1.03
HDAC6-222ENST00000478095 IRGMA1A4Y4 181 aa8.63□□□□□ -1.03
HDAC6-222ENST00000478095 FAM181BA6NEQ2 426 aa8.63□□□□□ -1.03
HDAC6-222ENST00000478095 FAM157AC9JC47 383 aa8.63□□□□□ -1.03
HDAC6-222ENST00000478095 INAFM1C9JVW0 142 aa8.63□□□□□ -1.03
HDAC6-222ENST00000478095 CD5LO43866 347 aa8.63□□□□□ -1.03
HDAC6-222ENST00000478095 UBCP0CG48 685 aaKnown RBP8.63□□□□□ -1.03
HDAC6-222ENST00000478095 ATP6V1B1P15313 513 aa8.63□□□□□ -1.03
HDAC6-222ENST00000478095 MYL12AP19105 171 aa8.63□□□□□ -1.03
HDAC6-222ENST00000478095 CCL1P22362 96 aa8.63□□□□□ -1.03
HDAC6-222ENST00000478095 DCKP27707 260 aa8.63□□□□□ -1.03
HDAC6-222ENST00000478095 CD80P33681 288 aa8.63□□□□□ -1.03
HDAC6-222ENST00000478095 GZMKP49863 264 aa8.63□□□□□ -1.03
HDAC6-222ENST00000478095 GPM6AP51674 278 aa8.63□□□□□ -1.03
HDAC6-222ENST00000478095 GTF2A1P52655 376 aaPredicted RBP8.63□□□□□ -1.03
HDAC6-222ENST00000478095 GBX2P52951 348 aaPredicted RBP8.63□□□□□ -1.03
HDAC6-222ENST00000478095 LMO4P61968 165 aa8.63□□□□□ -1.03
HDAC6-222ENST00000478095 MZT1Q08AG7 82 aa8.63□□□□□ -1.03
HDAC6-222ENST00000478095 ST3GAL4Q11206 333 aa8.63□□□□□ -1.03
HDAC6-222ENST00000478095 ZNF154Q13106 437 aa8.63□□□□□ -1.03
HDAC6-222ENST00000478095 SNCBQ16143 134 aa8.63□□□□□ -1.03
HDAC6-222ENST00000478095 PLCXD3Q63HM9 321 aa8.63□□□□□ -1.03
HDAC6-222ENST00000478095 CYB5R2Q6BCY4 276 aa8.63□□□□□ -1.03
HDAC6-222ENST00000478095 XAF1Q6GPH4 301 aa8.63□□□□□ -1.03
HDAC6-222ENST00000478095 MOB3CQ70IA8 216 aa8.63□□□□□ -1.03
HDAC6-222ENST00000478095 AHSA2Q719I0 299 aa8.63□□□□□ -1.03
HDAC6-222ENST00000478095 DEFB108BQ8NET1 73 aa8.63□□□□□ -1.03
HDAC6-222ENST00000478095 OR11L1Q8NGX0 322 aa8.63□□□□□ -1.03
HDAC6-222ENST00000478095 OR10AC1Q8NH08 325 aa8.63□□□□□ -1.03
HDAC6-222ENST00000478095 Q8TCH9 128 aa8.63□□□□□ -1.03
HDAC6-222ENST00000478095 OR5P3Q8WZ94 311 aa8.63□□□□□ -1.03
HDAC6-222ENST00000478095 TMEM80Q96HE8 168 aa8.63□□□□□ -1.03
HDAC6-222ENST00000478095 RNF170Q96K19 258 aa8.63□□□□□ -1.03
HDAC6-222ENST00000478095 HIST1H2AAQ96QV6 131 aa8.63□□□□□ -1.03
HDAC6-222ENST00000478095 JAM3Q9BX67 310 aa8.63□□□□□ -1.03
HDAC6-222ENST00000478095 METTL17Q9H7H0 456 aaPredicted RBP8.63□□□□□ -1.03
HDAC6-222ENST00000478095 ZNF665Q9H7R5 613 aa8.63□□□□□ -1.03
HDAC6-222ENST00000478095 PLEKHA1Q9HB21 404 aa8.63□□□□□ -1.03
HDAC6-222ENST00000478095 PSORS1C1Q9UIG5 152 aa8.63□□□□□ -1.03
HDAC6-222ENST00000478095 EXOSC1Q9Y3B2 195 aaKnown RBP8.63□□□□□ -1.03
HDAC6-222ENST00000478095 EFCAB10A6NFE3 127 aa8.62□□□□□ -1.03
HDAC6-222ENST00000478095 ZNF732B4DXR9 585 aa8.62□□□□□ -1.03
HDAC6-222ENST00000478095 IFNL4K9M1U5 179 aa8.62□□□□□ -1.03
HDAC6-222ENST00000478095 SLC1A7O00341 560 aa8.62□□□□□ -1.03
HDAC6-222ENST00000478095 CDIPTO14735 213 aa8.62□□□□□ -1.03
HDAC6-222ENST00000478095 PTBP3O95758 552 aaKnown RBP8.62□□□□□ -1.03
HDAC6-222ENST00000478095 NRASP01111 189 aa8.62□□□□□ -1.03
HDAC6-222ENST00000478095 TGFAP01135 160 aa8.62□□□□□ -1.03
HDAC6-222ENST00000478095 IGHV2-5P01817 119 aa8.62□□□□□ -1.03
HDAC6-222ENST00000478095 PIPP12273 146 aaPredicted RBP8.62□□□□□ -1.03
HDAC6-222ENST00000478095 EGR1P18146 543 aa8.62□□□□□ -1.03
HDAC6-222ENST00000478095 VHLP40337 213 aa8.62□□□□□ -1.03
HDAC6-222ENST00000478095 MDH2P40926 338 aaKnown RBP8.62□□□□□ -1.03
HDAC6-222ENST00000478095 HSPA13P48723 471 aa8.62□□□□□ -1.03
HDAC6-222ENST00000478095 GMFBP60983 142 aa8.62□□□□□ -1.03
HDAC6-222ENST00000478095 ALKBH1Q13686 389 aaKnown RBP8.62□□□□□ -1.03
HDAC6-222ENST00000478095 ZNF181Q2M3W8 571 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms